RNA–Protein interactions for RNA: ENST00000567006.1

ACSM3-210, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-210ENST00000567006 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
ACSM3-210ENST00000567006 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
ACSM3-210ENST00000567006 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
ACSM3-210ENST00000567006 KIF12Q96FN5 646 aa14.76□□□□□ -0.05
ACSM3-210ENST00000567006 NUBP1P53384 320 aa14.75□□□□□ -0.05
ACSM3-210ENST00000567006 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
ACSM3-210ENST00000567006 VASPP50552 380 aaPredicted RBP14.68□□□□□ -0.06
ACSM3-210ENST00000567006 ASTLQ6HA08 431 aaPredicted RBP14.68□□□□□ -0.06
ACSM3-210ENST00000567006 MAP3K13O43283 966 aa14.67□□□□□ -0.06
ACSM3-210ENST00000567006 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
ACSM3-210ENST00000567006 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
ACSM3-210ENST00000567006 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
ACSM3-210ENST00000567006 SGIP1Q9BQI5 828 aa14.62□□□□□ -0.07
ACSM3-210ENST00000567006 SLC39A7Q92504 469 aa14.59□□□□□ -0.07
ACSM3-210ENST00000567006 DCAF8Q5TAQ9 597 aa14.58□□□□□ -0.08
ACSM3-210ENST00000567006 PCDHB13Q9Y5F0 798 aa14.58□□□□□ -0.08
ACSM3-210ENST00000567006 C7P10643 843 aa14.57□□□□□ -0.08
ACSM3-210ENST00000567006 TIE1P35590 1138 aa14.56□□□□□ -0.08
ACSM3-210ENST00000567006 ATN1P54259 1190 aaPredicted RBP14.54□□□□□ -0.08
ACSM3-210ENST00000567006 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
ACSM3-210ENST00000567006 METRNQ9UJH8 293 aa14.54□□□□□ -0.08
ACSM3-210ENST00000567006 TRPC6Q9Y210 931 aa14.53□□□□□ -0.08
ACSM3-210ENST00000567006 GSE1Q14687 1217 aa14.48□□□□□ -0.09
ACSM3-210ENST00000567006 IFNL1Q8IU54 200 aa14.47□□□□□ -0.09
ACSM3-210ENST00000567006 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
ACSM3-210ENST00000567006 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
ACSM3-210ENST00000567006 PYGBP11216 843 aa14.44□□□□□ -0.1
ACSM3-210ENST00000567006 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
ACSM3-210ENST00000567006 OTUD5Q96G74 571 aa14.4□□□□□ -0.1
ACSM3-210ENST00000567006 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
ACSM3-210ENST00000567006 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
ACSM3-210ENST00000567006 TMEM106CQ9BVX2 250 aa14.37□□□□□ -0.11
ACSM3-210ENST00000567006 IER5LQ5T953 404 aa14.35□□□□□ -0.11
ACSM3-210ENST00000567006 MAMSTRQ6ZN01 415 aa14.35□□□□□ -0.11
ACSM3-210ENST00000567006 SEC24BO95487 1268 aa14.34□□□□□ -0.11
ACSM3-210ENST00000567006 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
ACSM3-210ENST00000567006 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
ACSM3-210ENST00000567006 POTEFA5A3E0 1075 aa14.3□□□□□ -0.12
ACSM3-210ENST00000567006 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
ACSM3-210ENST00000567006 POTEJP0CG39 1038 aa14.28□□□□□ -0.12
ACSM3-210ENST00000567006 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
ACSM3-210ENST00000567006 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
ACSM3-210ENST00000567006 COLQQ9Y215 455 aaPredicted RBP14.26□□□□□ -0.13
ACSM3-210ENST00000567006 PLCG2P16885 1265 aa14.19□□□□□ -0.14
ACSM3-210ENST00000567006 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
ACSM3-210ENST00000567006 PSEN1P49768 467 aa14.14□□□□□ -0.15
ACSM3-210ENST00000567006 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
ACSM3-210ENST00000567006 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
ACSM3-210ENST00000567006 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
ACSM3-210ENST00000567006 PDAP1Q13442 181 aaKnown RBP14.11□□□□□ -0.15
ACSM3-210ENST00000567006 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
ACSM3-210ENST00000567006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.171e-12■■■■□ 26.3
ACSM3-210ENST00000567006 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
ACSM3-210ENST00000567006 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
ACSM3-210ENST00000567006 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
ACSM3-210ENST00000567006 POTEMA6NI47 508 aa13.95□□□□□ -0.18
ACSM3-210ENST00000567006 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
ACSM3-210ENST00000567006 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
ACSM3-210ENST00000567006 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
ACSM3-210ENST00000567006 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
ACSM3-210ENST00000567006 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
ACSM3-210ENST00000567006 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
ACSM3-210ENST00000567006 C3orf67Q6ZVT6 689 aa13.86□□□□□ -0.19
ACSM3-210ENST00000567006 LCE2DQ5TA82 110 aaPredicted RBP13.85□□□□□ -0.19
ACSM3-210ENST00000567006 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
ACSM3-210ENST00000567006 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
ACSM3-210ENST00000567006 G3V3G9 751 aa13.81□□□□□ -0.2
ACSM3-210ENST00000567006 EFCAB3Q8N7B9 438 aa13.81□□□□□ -0.2
ACSM3-210ENST00000567006 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
ACSM3-210ENST00000567006 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
ACSM3-210ENST00000567006 SNPHO15079 494 aa13.8□□□□□ -0.2
ACSM3-210ENST00000567006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.78□□□□□ -0.2
ACSM3-210ENST00000567006 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
ACSM3-210ENST00000567006 ZFP91Q96JP5 570 aaPredicted RBP13.78□□□□□ -0.2
ACSM3-210ENST00000567006 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
ACSM3-210ENST00000567006 SOX12O15370 315 aa13.74□□□□□ -0.21
ACSM3-210ENST00000567006 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
ACSM3-210ENST00000567006 ST18O60284 1047 aa13.73□□□□□ -0.21
ACSM3-210ENST00000567006 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
ACSM3-210ENST00000567006 TMEM121BQ9BXQ6 578 aaPredicted RBP13.67□□□□□ -0.22
ACSM3-210ENST00000567006 PKD2Q13563 968 aa13.66□□□□□ -0.22
ACSM3-210ENST00000567006 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
ACSM3-210ENST00000567006 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
ACSM3-210ENST00000567006 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
ACSM3-210ENST00000567006 STK25O00506 426 aa13.6□□□□□ -0.23
ACSM3-210ENST00000567006 NLRP6P59044 892 aa13.59□□□□□ -0.23
ACSM3-210ENST00000567006 RGL2O15211 777 aa13.58□□□□□ -0.24
ACSM3-210ENST00000567006 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
ACSM3-210ENST00000567006 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
ACSM3-210ENST00000567006 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
ACSM3-210ENST00000567006 MARVELD3Q96A59 401 aa13.52□□□□□ -0.25
ACSM3-210ENST00000567006 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
ACSM3-210ENST00000567006 EMP3P54852 163 aa13.48□□□□□ -0.25
ACSM3-210ENST00000567006 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
ACSM3-210ENST00000567006 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
ACSM3-210ENST00000567006 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
ACSM3-210ENST00000567006 HOXB3P14651 431 aaPredicted RBP13.46□□□□□ -0.25
ACSM3-210ENST00000567006 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
ACSM3-210ENST00000567006 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
ACSM3-210ENST00000567006 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms