RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PROM2Q8N271 834 aa17.11■□□□□ 0.33
CHD9-214ENST00000565119 POTEJP0CG39 1038 aa17.09■□□□□ 0.33
CHD9-214ENST00000565119 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
CHD9-214ENST00000565119 POTEMA6NI47 508 aa17.08■□□□□ 0.32
CHD9-214ENST00000565119 C7P10643 843 aa17.07■□□□□ 0.32
CHD9-214ENST00000565119 SLC39A7Q92504 469 aa17.07■□□□□ 0.32
CHD9-214ENST00000565119 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
CHD9-214ENST00000565119 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
CHD9-214ENST00000565119 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
CHD9-214ENST00000565119 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
CHD9-214ENST00000565119 MAMSTRQ6ZN01 415 aa16.91■□□□□ 0.3
CHD9-214ENST00000565119 TRPC6Q9Y210 931 aa16.9■□□□□ 0.3
CHD9-214ENST00000565119 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
CHD9-214ENST00000565119 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
CHD9-214ENST00000565119 MAP3K13O43283 966 aa16.85■□□□□ 0.29
CHD9-214ENST00000565119 LCE2DQ5TA82 110 aaPredicted RBP16.84■□□□□ 0.29
CHD9-214ENST00000565119 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
CHD9-214ENST00000565119 MIER1Q8N108 512 aa16.82■□□□□ 0.28
CHD9-214ENST00000565119 SCUBE2Q9NQ36 999 aa16.8■□□□□ 0.28
CHD9-214ENST00000565119 TIE1P35590 1138 aa16.77■□□□□ 0.28
CHD9-214ENST00000565119 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
CHD9-214ENST00000565119 FAM163AQ96GL9 167 aaPredicted RBP16.76■□□□□ 0.27
CHD9-214ENST00000565119 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
CHD9-214ENST00000565119 COLQQ9Y215 455 aaPredicted RBP16.71■□□□□ 0.27
CHD9-214ENST00000565119 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
CHD9-214ENST00000565119 SEC24BO95487 1268 aa16.62■□□□□ 0.25
CHD9-214ENST00000565119 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
CHD9-214ENST00000565119 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
CHD9-214ENST00000565119 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
CHD9-214ENST00000565119 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
CHD9-214ENST00000565119 NUBP1P53384 320 aa16.57■□□□□ 0.24
CHD9-214ENST00000565119 IER5LQ5T953 404 aa16.54■□□□□ 0.24
CHD9-214ENST00000565119 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
CHD9-214ENST00000565119 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
CHD9-214ENST00000565119 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
CHD9-214ENST00000565119 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
CHD9-214ENST00000565119 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
CHD9-214ENST00000565119 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
CHD9-214ENST00000565119 PLCG2P16885 1265 aa16.35■□□□□ 0.21
CHD9-214ENST00000565119 ST18O60284 1047 aa16.34■□□□□ 0.21
CHD9-214ENST00000565119 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
CHD9-214ENST00000565119 FKBP8Q14318 412 aa16.26■□□□□ 0.19
CHD9-214ENST00000565119 PYGBP11216 843 aa16.24■□□□□ 0.19
CHD9-214ENST00000565119 DCAF8Q5TAQ9 597 aa16.23■□□□□ 0.19
CHD9-214ENST00000565119 OCEL1Q9H607 264 aa16.22■□□□□ 0.19
CHD9-214ENST00000565119 PCDHB8Q9UN66 801 aa16.19■□□□□ 0.18
CHD9-214ENST00000565119 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.1■□□□□ 0.17
CHD9-214ENST00000565119 TMEM121BQ9BXQ6 578 aaPredicted RBP16.09■□□□□ 0.17
CHD9-214ENST00000565119 SNPHO15079 494 aa16.05■□□□□ 0.16
CHD9-214ENST00000565119 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
CHD9-214ENST00000565119 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
CHD9-214ENST00000565119 SPNS2Q8IVW8 549 aa16.01■□□□□ 0.15
CHD9-214ENST00000565119 MMRN1Q13201 1228 aa16■□□□□ 0.15
CHD9-214ENST00000565119 FBXO3Q9UK99 471 aa16■□□□□ 0.15
CHD9-214ENST00000565119 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
CHD9-214ENST00000565119 GSE1Q14687 1217 aa15.93■□□□□ 0.14
CHD9-214ENST00000565119 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
CHD9-214ENST00000565119 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
CHD9-214ENST00000565119 C3orf67Q6ZVT6 689 aa15.91■□□□□ 0.14
CHD9-214ENST00000565119 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
CHD9-214ENST00000565119 CHRM1P11229 460 aaPredicted RBP15.89■□□□□ 0.13
CHD9-214ENST00000565119 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
CHD9-214ENST00000565119 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
CHD9-214ENST00000565119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.132e-9■■■□□ 17.8
CHD9-214ENST00000565119 PSEN1P49768 467 aa15.86■□□□□ 0.13
CHD9-214ENST00000565119 EMP3P54852 163 aa15.85■□□□□ 0.13
CHD9-214ENST00000565119 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
CHD9-214ENST00000565119 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
CHD9-214ENST00000565119 ILDR1Q86SU0 546 aaPredicted RBP15.8■□□□□ 0.12
CHD9-214ENST00000565119 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
CHD9-214ENST00000565119 KRTAP3-3Q9BYR6 98 aa15.77■□□□□ 0.12
CHD9-214ENST00000565119 KRTAP3-2Q9BYR7 98 aa15.77■□□□□ 0.12
CHD9-214ENST00000565119 HS3ST6Q96QI5 342 aa15.76■□□□□ 0.11
CHD9-214ENST00000565119 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
CHD9-214ENST00000565119 PDAP1Q13442 181 aaKnown RBP15.73■□□□□ 0.11
CHD9-214ENST00000565119 CABP2Q9NPB3 220 aa15.68■□□□□ 0.1
CHD9-214ENST00000565119 HOXB3P14651 431 aaPredicted RBP15.65■□□□□ 0.1
CHD9-214ENST00000565119 BOLA1Q9Y3E2 137 aa15.65■□□□□ 0.1
CHD9-214ENST00000565119 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
CHD9-214ENST00000565119 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
CHD9-214ENST00000565119 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
CHD9-214ENST00000565119 G3V3G9 751 aa15.57■□□□□ 0.08
CHD9-214ENST00000565119 HOXB1P14653 301 aaPredicted RBP15.53■□□□□ 0.08
CHD9-214ENST00000565119 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
CHD9-214ENST00000565119 DOK7Q18PE1 504 aa15.46■□□□□ 0.07
CHD9-214ENST00000565119 ERBB3P21860 1342 aa15.45■□□□□ 0.06
CHD9-214ENST00000565119 EFCAB3Q8N7B9 438 aa15.45■□□□□ 0.06
CHD9-214ENST00000565119 TMEM92Q6UXU6 159 aa15.39■□□□□ 0.05
CHD9-214ENST00000565119 VARS2Q5ST30 1063 aaKnown RBP15.37■□□□□ 0.05
CHD9-214ENST00000565119 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
CHD9-214ENST00000565119 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
CHD9-214ENST00000565119 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
CHD9-214ENST00000565119 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
CHD9-214ENST00000565119 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
CHD9-214ENST00000565119 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
CHD9-214ENST00000565119 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.04
CHD9-214ENST00000565119 ZNF687Q8N1G0 1237 aa15.25■□□□□ 0.03
CHD9-214ENST00000565119 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
CHD9-214ENST00000565119 SOX12O15370 315 aa15.23■□□□□ 0.03
CHD9-214ENST00000565119 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms