RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
SH3GL3-206ENST00000564054 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
SH3GL3-206ENST00000564054 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
SH3GL3-206ENST00000564054 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
SH3GL3-206ENST00000564054 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
SH3GL3-206ENST00000564054 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
SH3GL3-206ENST00000564054 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
SH3GL3-206ENST00000564054 C7P10643 843 aa13.69□□□□□ -0.22
SH3GL3-206ENST00000564054 FKBP8Q14318 412 aa13.69□□□□□ -0.22
SH3GL3-206ENST00000564054 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
SH3GL3-206ENST00000564054 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
SH3GL3-206ENST00000564054 MAP3K13O43283 966 aa13.63□□□□□ -0.23
SH3GL3-206ENST00000564054 ATN1P54259 1190 aaPredicted RBP13.62□□□□□ -0.23
SH3GL3-206ENST00000564054 TIE1P35590 1138 aa13.57□□□□□ -0.24
SH3GL3-206ENST00000564054 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
SH3GL3-206ENST00000564054 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
SH3GL3-206ENST00000564054 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
SH3GL3-206ENST00000564054 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
SH3GL3-206ENST00000564054 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
SH3GL3-206ENST00000564054 NUBP1P53384 320 aa13.52□□□□□ -0.25
SH3GL3-206ENST00000564054 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
SH3GL3-206ENST00000564054 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
SH3GL3-206ENST00000564054 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
SH3GL3-206ENST00000564054 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
SH3GL3-206ENST00000564054 SEC24BO95487 1268 aa13.47□□□□□ -0.25
SH3GL3-206ENST00000564054 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
SH3GL3-206ENST00000564054 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
SH3GL3-206ENST00000564054 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
SH3GL3-206ENST00000564054 POTEMA6NI47 508 aa13.41□□□□□ -0.26
SH3GL3-206ENST00000564054 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
SH3GL3-206ENST00000564054 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
SH3GL3-206ENST00000564054 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
SH3GL3-206ENST00000564054 IER5LQ5T953 404 aa13.38□□□□□ -0.27
SH3GL3-206ENST00000564054 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
SH3GL3-206ENST00000564054 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
SH3GL3-206ENST00000564054 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
SH3GL3-206ENST00000564054 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
SH3GL3-206ENST00000564054 PYGBP11216 843 aa13.32□□□□□ -0.28
SH3GL3-206ENST00000564054 FAM163AQ96GL9 167 aaPredicted RBP13.31□□□□□ -0.28
SH3GL3-206ENST00000564054 PLCG2P16885 1265 aa13.27□□□□□ -0.29
SH3GL3-206ENST00000564054 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
SH3GL3-206ENST00000564054 GSE1Q14687 1217 aa13.24□□□□□ -0.29
SH3GL3-206ENST00000564054 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
SH3GL3-206ENST00000564054 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
SH3GL3-206ENST00000564054 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
SH3GL3-206ENST00000564054 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
SH3GL3-206ENST00000564054 OCEL1Q9H607 264 aa13.16□□□□□ -0.3
SH3GL3-206ENST00000564054 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
SH3GL3-206ENST00000564054 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
SH3GL3-206ENST00000564054 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
SH3GL3-206ENST00000564054 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
SH3GL3-206ENST00000564054 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
SH3GL3-206ENST00000564054 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
SH3GL3-206ENST00000564054 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
SH3GL3-206ENST00000564054 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
SH3GL3-206ENST00000564054 PSEN1P49768 467 aa13.01□□□□□ -0.33
SH3GL3-206ENST00000564054 ST18O60284 1047 aa12.99□□□□□ -0.33
SH3GL3-206ENST00000564054 SNPHO15079 494 aa12.98□□□□□ -0.33
SH3GL3-206ENST00000564054 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
SH3GL3-206ENST00000564054 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
SH3GL3-206ENST00000564054 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
SH3GL3-206ENST00000564054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
SH3GL3-206ENST00000564054 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
SH3GL3-206ENST00000564054 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
SH3GL3-206ENST00000564054 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
SH3GL3-206ENST00000564054 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
SH3GL3-206ENST00000564054 G3V3G9 751 aa12.86□□□□□ -0.35
SH3GL3-206ENST00000564054 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
SH3GL3-206ENST00000564054 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
SH3GL3-206ENST00000564054 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
SH3GL3-206ENST00000564054 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
SH3GL3-206ENST00000564054 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
SH3GL3-206ENST00000564054 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
SH3GL3-206ENST00000564054 EMP3P54852 163 aa12.72□□□□□ -0.37
SH3GL3-206ENST00000564054 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
SH3GL3-206ENST00000564054 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
SH3GL3-206ENST00000564054 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
SH3GL3-206ENST00000564054 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
SH3GL3-206ENST00000564054 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
SH3GL3-206ENST00000564054 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
SH3GL3-206ENST00000564054 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
SH3GL3-206ENST00000564054 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
SH3GL3-206ENST00000564054 SOX12O15370 315 aa12.58□□□□□ -0.4
SH3GL3-206ENST00000564054 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
SH3GL3-206ENST00000564054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
SH3GL3-206ENST00000564054 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
SH3GL3-206ENST00000564054 RIMBP2O15034 1052 aa12.55□□□□□ -0.4
SH3GL3-206ENST00000564054 HOXB3P14651 431 aaPredicted RBP12.54□□□□□ -0.4
SH3GL3-206ENST00000564054 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
SH3GL3-206ENST00000564054 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
SH3GL3-206ENST00000564054 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
SH3GL3-206ENST00000564054 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
SH3GL3-206ENST00000564054 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
SH3GL3-206ENST00000564054 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
SH3GL3-206ENST00000564054 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SH3GL3-206ENST00000564054 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
SH3GL3-206ENST00000564054 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
SH3GL3-206ENST00000564054 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
SH3GL3-206ENST00000564054 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
SH3GL3-206ENST00000564054 NLRP6P59044 892 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms