RNA–Protein interactions for RNA: ENST00000563873.5

SNAP23-209, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-209ENST00000563873 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
SNAP23-209ENST00000563873 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
SNAP23-209ENST00000563873 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
SNAP23-209ENST00000563873 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
SNAP23-209ENST00000563873 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
SNAP23-209ENST00000563873 FKBP8Q14318 412 aa11.67□□□□□ -0.54
SNAP23-209ENST00000563873 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
SNAP23-209ENST00000563873 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
SNAP23-209ENST00000563873 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
SNAP23-209ENST00000563873 MIER1Q8N108 512 aa11.62□□□□□ -0.55
SNAP23-209ENST00000563873 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
SNAP23-209ENST00000563873 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
SNAP23-209ENST00000563873 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
SNAP23-209ENST00000563873 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SNAP23-209ENST00000563873 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
SNAP23-209ENST00000563873 LHX8Q68G74 356 aa11.52□□□□□ -0.57
SNAP23-209ENST00000563873 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
SNAP23-209ENST00000563873 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
SNAP23-209ENST00000563873 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
SNAP23-209ENST00000563873 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
SNAP23-209ENST00000563873 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
SNAP23-209ENST00000563873 ZCCHC6Q5VYS8 1495 aaKnown RBP11.43□□□□□ -0.58
SNAP23-209ENST00000563873 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
SNAP23-209ENST00000563873 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
SNAP23-209ENST00000563873 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
SNAP23-209ENST00000563873 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
SNAP23-209ENST00000563873 NESP48681 1621 aa11.34□□□□□ -0.59
SNAP23-209ENST00000563873 NUBP1P53384 320 aa11.33□□□□□ -0.6
SNAP23-209ENST00000563873 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
SNAP23-209ENST00000563873 MAP3K13O43283 966 aa11.31□□□□□ -0.6
SNAP23-209ENST00000563873 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
SNAP23-209ENST00000563873 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
SNAP23-209ENST00000563873 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
SNAP23-209ENST00000563873 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
SNAP23-209ENST00000563873 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
SNAP23-209ENST00000563873 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
SNAP23-209ENST00000563873 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
SNAP23-209ENST00000563873 C7P10643 843 aa11.25□□□□□ -0.61
SNAP23-209ENST00000563873 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
SNAP23-209ENST00000563873 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
SNAP23-209ENST00000563873 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SNAP23-209ENST00000563873 TIE1P35590 1138 aa11.24□□□□□ -0.61
SNAP23-209ENST00000563873 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
SNAP23-209ENST00000563873 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
SNAP23-209ENST00000563873 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
SNAP23-209ENST00000563873 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
SNAP23-209ENST00000563873 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
SNAP23-209ENST00000563873 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
SNAP23-209ENST00000563873 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
SNAP23-209ENST00000563873 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
SNAP23-209ENST00000563873 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
SNAP23-209ENST00000563873 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SNAP23-209ENST00000563873 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
SNAP23-209ENST00000563873 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
SNAP23-209ENST00000563873 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
SNAP23-209ENST00000563873 PYGBP11216 843 aa11.13□□□□□ -0.63
SNAP23-209ENST00000563873 GSE1Q14687 1217 aa11.13□□□□□ -0.63
SNAP23-209ENST00000563873 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
SNAP23-209ENST00000563873 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
SNAP23-209ENST00000563873 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
SNAP23-209ENST00000563873 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
SNAP23-209ENST00000563873 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
SNAP23-209ENST00000563873 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
SNAP23-209ENST00000563873 SEC24BO95487 1268 aa11.1□□□□□ -0.63
SNAP23-209ENST00000563873 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
SNAP23-209ENST00000563873 IER5LQ5T953 404 aa11.07□□□□□ -0.64
SNAP23-209ENST00000563873 WDR62O43379 1518 aa11.06□□□□□ -0.64
SNAP23-209ENST00000563873 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
SNAP23-209ENST00000563873 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
SNAP23-209ENST00000563873 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
SNAP23-209ENST00000563873 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
SNAP23-209ENST00000563873 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
SNAP23-209ENST00000563873 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
SNAP23-209ENST00000563873 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
SNAP23-209ENST00000563873 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
SNAP23-209ENST00000563873 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
SNAP23-209ENST00000563873 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
SNAP23-209ENST00000563873 ARHGEF11O15085 1522 aa11□□□□□ -0.65
SNAP23-209ENST00000563873 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
SNAP23-209ENST00000563873 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
SNAP23-209ENST00000563873 PLCG2P16885 1265 aa10.98□□□□□ -0.65
SNAP23-209ENST00000563873 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
SNAP23-209ENST00000563873 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
SNAP23-209ENST00000563873 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
SNAP23-209ENST00000563873 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
SNAP23-209ENST00000563873 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
SNAP23-209ENST00000563873 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
SNAP23-209ENST00000563873 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
SNAP23-209ENST00000563873 OCEL1Q9H607 264 aa10.89□□□□□ -0.67
SNAP23-209ENST00000563873 PSEN1P49768 467 aa10.88□□□□□ -0.67
SNAP23-209ENST00000563873 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
SNAP23-209ENST00000563873 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
SNAP23-209ENST00000563873 POTEMA6NI47 508 aa10.84□□□□□ -0.67
SNAP23-209ENST00000563873 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
SNAP23-209ENST00000563873 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
SNAP23-209ENST00000563873 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
SNAP23-209ENST00000563873 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
SNAP23-209ENST00000563873 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
SNAP23-209ENST00000563873 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
SNAP23-209ENST00000563873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.681e-8■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms