RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
AC027458.1-201ENST00000563639 SPOCK2Q92563 424 aa18.15■□□□□ 0.5
AC027458.1-201ENST00000563639 FAM212AQ96EL1 285 aa18.15■□□□□ 0.5
AC027458.1-201ENST00000563639 CLCN6P51797 869 aa18.12■□□□□ 0.49
AC027458.1-201ENST00000563639 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.48
AC027458.1-201ENST00000563639 GALR2O43603 387 aaPredicted RBP18.04■□□□□ 0.48
AC027458.1-201ENST00000563639 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
AC027458.1-201ENST00000563639 GSE1Q14687 1217 aa17.99■□□□□ 0.47
AC027458.1-201ENST00000563639 MS4A3Q96HJ5 214 aa17.99■□□□□ 0.47
AC027458.1-201ENST00000563639 MAP3K13O43283 966 aa17.98■□□□□ 0.47
AC027458.1-201ENST00000563639 PYGBP11216 843 aa17.92■□□□□ 0.46
AC027458.1-201ENST00000563639 CIZ1Q9ULV3 898 aaPredicted RBP17.92■□□□□ 0.46
AC027458.1-201ENST00000563639 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
AC027458.1-201ENST00000563639 PCDHB13Q9Y5F0 798 aa17.87■□□□□ 0.45
AC027458.1-201ENST00000563639 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
AC027458.1-201ENST00000563639 DCBLD2Q96PD2 775 aa17.84■□□□□ 0.45
AC027458.1-201ENST00000563639 TRPC6Q9Y210 931 aa17.83■□□□□ 0.44
AC027458.1-201ENST00000563639 CHRM1P11229 460 aaPredicted RBP17.81■□□□□ 0.44
AC027458.1-201ENST00000563639 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
AC027458.1-201ENST00000563639 PCDHB8Q9UN66 801 aa17.73■□□□□ 0.43
AC027458.1-201ENST00000563639 ASTLQ6HA08 431 aaPredicted RBP17.71■□□□□ 0.43
AC027458.1-201ENST00000563639 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
AC027458.1-201ENST00000563639 BMP2KQ9NSY1 1161 aaPredicted RBP17.7■□□□□ 0.42
AC027458.1-201ENST00000563639 ATMINO43313 823 aaPredicted RBP17.69■□□□□ 0.42
AC027458.1-201ENST00000563639 TIE1P35590 1138 aa17.69■□□□□ 0.42
AC027458.1-201ENST00000563639 ZNF467Q7Z7K2 595 aaPredicted RBP17.65■□□□□ 0.42
AC027458.1-201ENST00000563639 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
AC027458.1-201ENST00000563639 TTLL13PA6NNM8 815 aa17.63■□□□□ 0.41
AC027458.1-201ENST00000563639 ATN1P54259 1190 aaPredicted RBP17.63■□□□□ 0.41
AC027458.1-201ENST00000563639 PKD2Q13563 968 aa17.63■□□□□ 0.41
AC027458.1-201ENST00000563639 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
AC027458.1-201ENST00000563639 RNF25Q96BH1 459 aaPredicted RBP17.56■□□□□ 0.4
AC027458.1-201ENST00000563639 ECM2O94769 699 aaPredicted RBP17.53■□□□□ 0.4
AC027458.1-201ENST00000563639 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
AC027458.1-201ENST00000563639 PSEN1P49768 467 aa17.5■□□□□ 0.39
AC027458.1-201ENST00000563639 PDAP1Q13442 181 aaKnown RBP17.49■□□□□ 0.39
AC027458.1-201ENST00000563639 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
AC027458.1-201ENST00000563639 SLC39A7Q92504 469 aa17.47■□□□□ 0.39
AC027458.1-201ENST00000563639 METRNQ9UJH8 293 aa17.46■□□□□ 0.39
AC027458.1-201ENST00000563639 C7P10643 843 aa17.44■□□□□ 0.38
AC027458.1-201ENST00000563639 RGL2O15211 777 aa17.41■□□□□ 0.38
AC027458.1-201ENST00000563639 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
AC027458.1-201ENST00000563639 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
AC027458.1-201ENST00000563639 IER5LQ5T953 404 aa17.36■□□□□ 0.37
AC027458.1-201ENST00000563639 LHX8Q68G74 356 aa17.35■□□□□ 0.37
AC027458.1-201ENST00000563639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.36
AC027458.1-201ENST00000563639 ZFP91Q96JP5 570 aaPredicted RBP17.33■□□□□ 0.36
AC027458.1-201ENST00000563639 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
AC027458.1-201ENST00000563639 COLQQ9Y215 455 aaPredicted RBP17.32■□□□□ 0.36
AC027458.1-201ENST00000563639 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
AC027458.1-201ENST00000563639 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
AC027458.1-201ENST00000563639 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
AC027458.1-201ENST00000563639 SEC24BO95487 1268 aa17.25■□□□□ 0.35
AC027458.1-201ENST00000563639 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
AC027458.1-201ENST00000563639 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
AC027458.1-201ENST00000563639 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
AC027458.1-201ENST00000563639 PLCG2P16885 1265 aa17.19■□□□□ 0.34
AC027458.1-201ENST00000563639 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
AC027458.1-201ENST00000563639 EFCAB3Q8N7B9 438 aa17.18■□□□□ 0.34
AC027458.1-201ENST00000563639 OCEL1Q9H607 264 aa17.18■□□□□ 0.34
AC027458.1-201ENST00000563639 STK25O00506 426 aa17.16■□□□□ 0.34
AC027458.1-201ENST00000563639 STK24Q9Y6E0 443 aa17.15■□□□□ 0.34
AC027458.1-201ENST00000563639 ILDR1Q86SU0 546 aaPredicted RBP17.14■□□□□ 0.33
AC027458.1-201ENST00000563639 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.33
AC027458.1-201ENST00000563639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.33
AC027458.1-201ENST00000563639 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
AC027458.1-201ENST00000563639 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
AC027458.1-201ENST00000563639 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
AC027458.1-201ENST00000563639 SOX12O15370 315 aa17.03■□□□□ 0.32
AC027458.1-201ENST00000563639 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.32
AC027458.1-201ENST00000563639 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
AC027458.1-201ENST00000563639 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
AC027458.1-201ENST00000563639 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
AC027458.1-201ENST00000563639 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
AC027458.1-201ENST00000563639 MS4A4AQ96JQ5 239 aa16.96■□□□□ 0.31
AC027458.1-201ENST00000563639 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
AC027458.1-201ENST00000563639 MFRPQ9BY79 579 aa16.95■□□□□ 0.3
AC027458.1-201ENST00000563639 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
AC027458.1-201ENST00000563639 FBXO22Q8NEZ5 403 aa16.93■□□□□ 0.3
AC027458.1-201ENST00000563639 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
AC027458.1-201ENST00000563639 NLRP6P59044 892 aa16.9■□□□□ 0.3
AC027458.1-201ENST00000563639 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
AC027458.1-201ENST00000563639 BOLA1Q9Y3E2 137 aa16.85■□□□□ 0.29
AC027458.1-201ENST00000563639 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
AC027458.1-201ENST00000563639 TMEM121BQ9BXQ6 578 aaPredicted RBP16.81■□□□□ 0.28
AC027458.1-201ENST00000563639 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.79■□□□□ 0.28
AC027458.1-201ENST00000563639 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
AC027458.1-201ENST00000563639 G3V3G9 751 aa16.77■□□□□ 0.28
AC027458.1-201ENST00000563639 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
AC027458.1-201ENST00000563639 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
AC027458.1-201ENST00000563639 PPP1R37O75864 691 aa16.71■□□□□ 0.27
AC027458.1-201ENST00000563639 TMEM92Q6UXU6 159 aa16.62■□□□□ 0.25
AC027458.1-201ENST00000563639 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
AC027458.1-201ENST00000563639 RYDENQ9NUL5 291 aaKnown RBP16.59■□□□□ 0.25
AC027458.1-201ENST00000563639 BBXQ8WY36 941 aaPredicted RBP16.56■□□□□ 0.24
AC027458.1-201ENST00000563639 LCE2DQ5TA82 110 aaPredicted RBP16.51■□□□□ 0.23
AC027458.1-201ENST00000563639 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
AC027458.1-201ENST00000563639 KIF3CO14782 793 aa16.45■□□□□ 0.22
AC027458.1-201ENST00000563639 SNPHO15079 494 aa16.45■□□□□ 0.22
AC027458.1-201ENST00000563639 C2orf72A6NCS6 295 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms