RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
HDGFL3-202ENST00000562702 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
HDGFL3-202ENST00000562702 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
HDGFL3-202ENST00000562702 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-202ENST00000562702 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
HDGFL3-202ENST00000562702 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
HDGFL3-202ENST00000562702 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
HDGFL3-202ENST00000562702 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
HDGFL3-202ENST00000562702 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
HDGFL3-202ENST00000562702 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
HDGFL3-202ENST00000562702 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
HDGFL3-202ENST00000562702 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
HDGFL3-202ENST00000562702 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
HDGFL3-202ENST00000562702 TIE1P35590 1138 aa12.05□□□□□ -0.48
HDGFL3-202ENST00000562702 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
HDGFL3-202ENST00000562702 MAP3K13O43283 966 aa12.04□□□□□ -0.48
HDGFL3-202ENST00000562702 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-202ENST00000562702 POTEMA6NI47 508 aa12.01□□□□□ -0.49
HDGFL3-202ENST00000562702 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
HDGFL3-202ENST00000562702 SEC24BO95487 1268 aa11.97□□□□□ -0.49
HDGFL3-202ENST00000562702 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
HDGFL3-202ENST00000562702 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
HDGFL3-202ENST00000562702 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
HDGFL3-202ENST00000562702 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
HDGFL3-202ENST00000562702 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
HDGFL3-202ENST00000562702 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
HDGFL3-202ENST00000562702 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
HDGFL3-202ENST00000562702 FKBP8Q14318 412 aa11.92□□□□□ -0.5
HDGFL3-202ENST00000562702 NUBP1P53384 320 aa11.9□□□□□ -0.5
HDGFL3-202ENST00000562702 IER5LQ5T953 404 aa11.9□□□□□ -0.5
HDGFL3-202ENST00000562702 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
HDGFL3-202ENST00000562702 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
HDGFL3-202ENST00000562702 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
HDGFL3-202ENST00000562702 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
HDGFL3-202ENST00000562702 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
HDGFL3-202ENST00000562702 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
HDGFL3-202ENST00000562702 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
HDGFL3-202ENST00000562702 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
HDGFL3-202ENST00000562702 PLCG2P16885 1265 aa11.78□□□□□ -0.52
HDGFL3-202ENST00000562702 PYGBP11216 843 aa11.71□□□□□ -0.53
HDGFL3-202ENST00000562702 LCE2DQ5TA82 110 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-202ENST00000562702 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
HDGFL3-202ENST00000562702 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
HDGFL3-202ENST00000562702 GSE1Q14687 1217 aa11.67□□□□□ -0.54
HDGFL3-202ENST00000562702 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
HDGFL3-202ENST00000562702 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
HDGFL3-202ENST00000562702 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
HDGFL3-202ENST00000562702 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-202ENST00000562702 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
HDGFL3-202ENST00000562702 SNPHO15079 494 aa11.6□□□□□ -0.55
HDGFL3-202ENST00000562702 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
HDGFL3-202ENST00000562702 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
HDGFL3-202ENST00000562702 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
HDGFL3-202ENST00000562702 ST18O60284 1047 aa11.56□□□□□ -0.56
HDGFL3-202ENST00000562702 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-202ENST00000562702 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-202ENST00000562702 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-202ENST00000562702 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-202ENST00000562702 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
HDGFL3-202ENST00000562702 PSEN1P49768 467 aa11.47□□□□□ -0.57
HDGFL3-202ENST00000562702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDGFL3-202ENST00000562702 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-202ENST00000562702 PDCD7Q8N8D1 485 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-202ENST00000562702 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
HDGFL3-202ENST00000562702 G3V3G9 751 aa11.42□□□□□ -0.58
HDGFL3-202ENST00000562702 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
HDGFL3-202ENST00000562702 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
HDGFL3-202ENST00000562702 EMP3P54852 163 aa11.33□□□□□ -0.6
HDGFL3-202ENST00000562702 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
HDGFL3-202ENST00000562702 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-202ENST00000562702 TRIM41Q8WV44 630 aa11.3□□□□□ -0.6
HDGFL3-202ENST00000562702 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-202ENST00000562702 SPNS2Q8IVW8 549 aa11.27□□□□□ -0.61
HDGFL3-202ENST00000562702 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
HDGFL3-202ENST00000562702 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
HDGFL3-202ENST00000562702 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
HDGFL3-202ENST00000562702 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
HDGFL3-202ENST00000562702 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
HDGFL3-202ENST00000562702 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
HDGFL3-202ENST00000562702 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
HDGFL3-202ENST00000562702 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
HDGFL3-202ENST00000562702 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
HDGFL3-202ENST00000562702 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
HDGFL3-202ENST00000562702 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
HDGFL3-202ENST00000562702 SOX12O15370 315 aa11.1□□□□□ -0.63
HDGFL3-202ENST00000562702 ERBB3P21860 1342 aa11.09□□□□□ -0.63
HDGFL3-202ENST00000562702 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
HDGFL3-202ENST00000562702 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
HDGFL3-202ENST00000562702 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
HDGFL3-202ENST00000562702 POTEB3A0JP26 581 aa11.08□□□□□ -0.64
HDGFL3-202ENST00000562702 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
HDGFL3-202ENST00000562702 VGFO15240 615 aaPredicted RBP11.07□□□□□ -0.64
HDGFL3-202ENST00000562702 TAOK2Q9UL54 1235 aa11.06□□□□□ -0.64
HDGFL3-202ENST00000562702 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
HDGFL3-202ENST00000562702 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
HDGFL3-202ENST00000562702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-202ENST00000562702 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-202ENST00000562702 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
HDGFL3-202ENST00000562702 NLRP6P59044 892 aa10.96□□□□□ -0.65
HDGFL3-202ENST00000562702 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms