RNA–Protein interactions for RNA: ENST00000561335.2

AC090888.1-201, humanhuman

BASIC

Gene AC090888.1, Length 1,141 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.1-201ENST00000561335 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
AC090888.1-201ENST00000561335 MIER1Q8N108 512 aa14.17□□□□□ -0.14
AC090888.1-201ENST00000561335 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
AC090888.1-201ENST00000561335 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
AC090888.1-201ENST00000561335 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
AC090888.1-201ENST00000561335 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
AC090888.1-201ENST00000561335 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
AC090888.1-201ENST00000561335 METRNQ9UJH8 293 aa14.01□□□□□ -0.17
AC090888.1-201ENST00000561335 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
AC090888.1-201ENST00000561335 PHF12Q96QT6 1004 aa14□□□□□ -0.17
AC090888.1-201ENST00000561335 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
AC090888.1-201ENST00000561335 CDAN1Q8IWY9 1227 aa13.99□□□□□ -0.17
AC090888.1-201ENST00000561335 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
AC090888.1-201ENST00000561335 C7P10643 843 aa13.87□□□□□ -0.19
AC090888.1-201ENST00000561335 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
AC090888.1-201ENST00000561335 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
AC090888.1-201ENST00000561335 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
AC090888.1-201ENST00000561335 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
AC090888.1-201ENST00000561335 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
AC090888.1-201ENST00000561335 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
AC090888.1-201ENST00000561335 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
AC090888.1-201ENST00000561335 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
AC090888.1-201ENST00000561335 NUBP1P53384 320 aa13.78□□□□□ -0.2
AC090888.1-201ENST00000561335 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
AC090888.1-201ENST00000561335 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
AC090888.1-201ENST00000561335 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
AC090888.1-201ENST00000561335 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
AC090888.1-201ENST00000561335 MAP3K13O43283 966 aa13.72□□□□□ -0.21
AC090888.1-201ENST00000561335 SPNS2Q8IVW8 549 aa13.69□□□□□ -0.22
AC090888.1-201ENST00000561335 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
AC090888.1-201ENST00000561335 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
AC090888.1-201ENST00000561335 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
AC090888.1-201ENST00000561335 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
AC090888.1-201ENST00000561335 TIE1P35590 1138 aa13.61□□□□□ -0.23
AC090888.1-201ENST00000561335 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
AC090888.1-201ENST00000561335 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
AC090888.1-201ENST00000561335 GSE1Q14687 1217 aa13.57□□□□□ -0.24
AC090888.1-201ENST00000561335 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
AC090888.1-201ENST00000561335 ST18O60284 1047 aa13.55□□□□□ -0.24
AC090888.1-201ENST00000561335 PYGBP11216 843 aa13.53□□□□□ -0.24
AC090888.1-201ENST00000561335 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
AC090888.1-201ENST00000561335 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
AC090888.1-201ENST00000561335 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
AC090888.1-201ENST00000561335 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
AC090888.1-201ENST00000561335 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
AC090888.1-201ENST00000561335 SEC24BO95487 1268 aa13.44□□□□□ -0.26
AC090888.1-201ENST00000561335 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
AC090888.1-201ENST00000561335 COLQQ9Y215 455 aaPredicted RBP13.41□□□□□ -0.26
AC090888.1-201ENST00000561335 IER5LQ5T953 404 aa13.4□□□□□ -0.26
AC090888.1-201ENST00000561335 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
AC090888.1-201ENST00000561335 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
AC090888.1-201ENST00000561335 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
AC090888.1-201ENST00000561335 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
AC090888.1-201ENST00000561335 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
AC090888.1-201ENST00000561335 PLCG2P16885 1265 aa13.29□□□□□ -0.28
AC090888.1-201ENST00000561335 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
AC090888.1-201ENST00000561335 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
AC090888.1-201ENST00000561335 PSEN1P49768 467 aa13.23□□□□□ -0.29
AC090888.1-201ENST00000561335 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
AC090888.1-201ENST00000561335 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
AC090888.1-201ENST00000561335 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
AC090888.1-201ENST00000561335 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
AC090888.1-201ENST00000561335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC090888.1-201ENST00000561335 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
AC090888.1-201ENST00000561335 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
AC090888.1-201ENST00000561335 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
AC090888.1-201ENST00000561335 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
AC090888.1-201ENST00000561335 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
AC090888.1-201ENST00000561335 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
AC090888.1-201ENST00000561335 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
AC090888.1-201ENST00000561335 G3V3G9 751 aa12.98□□□□□ -0.33
AC090888.1-201ENST00000561335 SNPHO15079 494 aa12.98□□□□□ -0.33
AC090888.1-201ENST00000561335 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
AC090888.1-201ENST00000561335 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
AC090888.1-201ENST00000561335 EMP3P54852 163 aa12.95□□□□□ -0.34
AC090888.1-201ENST00000561335 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
AC090888.1-201ENST00000561335 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
AC090888.1-201ENST00000561335 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
AC090888.1-201ENST00000561335 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
AC090888.1-201ENST00000561335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
AC090888.1-201ENST00000561335 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
AC090888.1-201ENST00000561335 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.34
AC090888.1-201ENST00000561335 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
AC090888.1-201ENST00000561335 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
AC090888.1-201ENST00000561335 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
AC090888.1-201ENST00000561335 SOX12O15370 315 aa12.86□□□□□ -0.35
AC090888.1-201ENST00000561335 RNF166Q96A37 237 aaPredicted RBP12.8□□□□□ -0.36
AC090888.1-201ENST00000561335 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
AC090888.1-201ENST00000561335 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
AC090888.1-201ENST00000561335 PKD2Q13563 968 aa12.78□□□□□ -0.36
AC090888.1-201ENST00000561335 STK25O00506 426 aa12.77□□□□□ -0.37
AC090888.1-201ENST00000561335 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
AC090888.1-201ENST00000561335 NLRP6P59044 892 aa12.73□□□□□ -0.37
AC090888.1-201ENST00000561335 RGL2O15211 777 aa12.72□□□□□ -0.37
AC090888.1-201ENST00000561335 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms