RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 FAM212AQ96EL1 285 aa8.66□□□□□ -1.02
CTDSPL2-211ENST00000561189 EVX2Q03828 476 aa8.65□□□□□ -1.02
CTDSPL2-211ENST00000561189 TRIM41Q8WV44 630 aa8.64□□□□□ -1.03
CTDSPL2-211ENST00000561189 CCDC61Q9Y6R9 512 aa8.64□□□□□ -1.03
CTDSPL2-211ENST00000561189 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-211ENST00000561189 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
CTDSPL2-211ENST00000561189 ZRANB1Q9UGI0 708 aa8.59□□□□□ -1.03
CTDSPL2-211ENST00000561189 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
CTDSPL2-211ENST00000561189 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL2-211ENST00000561189 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
CTDSPL2-211ENST00000561189 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
CTDSPL2-211ENST00000561189 PKD2Q13563 968 aa8.51□□□□□ -1.05
CTDSPL2-211ENST00000561189 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-211ENST00000561189 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
CTDSPL2-211ENST00000561189 GABBR2O75899 941 aa8.48□□□□□ -1.05
CTDSPL2-211ENST00000561189 ZNF467Q7Z7K2 595 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-211ENST00000561189 MAP3K13O43283 966 aa8.46□□□□□ -1.06
CTDSPL2-211ENST00000561189 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
CTDSPL2-211ENST00000561189 PYGBP11216 843 aa8.44□□□□□ -1.06
CTDSPL2-211ENST00000561189 MS4A3Q96HJ5 214 aa8.44□□□□□ -1.06
CTDSPL2-211ENST00000561189 PCDHB13Q9Y5F0 798 aa8.44□□□□□ -1.06
CTDSPL2-211ENST00000561189 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-211ENST00000561189 ECM2O94769 699 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-211ENST00000561189 TIE1P35590 1138 aa8.41□□□□□ -1.06
CTDSPL2-211ENST00000561189 IFNL1Q8IU54 200 aa8.41□□□□□ -1.06
CTDSPL2-211ENST00000561189 RNF25Q96BH1 459 aaPredicted RBP8.4□□□□□ -1.06
CTDSPL2-211ENST00000561189 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.06
CTDSPL2-211ENST00000561189 RIOK3O14730 519 aaKnown RBP8.39□□□□□ -1.07
CTDSPL2-211ENST00000561189 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
CTDSPL2-211ENST00000561189 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL2-211ENST00000561189 PDAP1Q13442 181 aaKnown RBP8.36□□□□□ -1.07
CTDSPL2-211ENST00000561189 RGL2O15211 777 aa8.35□□□□□ -1.07
CTDSPL2-211ENST00000561189 BMP2KQ9NSY1 1161 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-211ENST00000561189 PCDHB8Q9UN66 801 aa8.33□□□□□ -1.08
CTDSPL2-211ENST00000561189 ATMINO43313 823 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-211ENST00000561189 PSEN1P49768 467 aa8.32□□□□□ -1.08
CTDSPL2-211ENST00000561189 TTLL13PA6NNM8 815 aa8.31□□□□□ -1.08
CTDSPL2-211ENST00000561189 DCBLD2Q96PD2 775 aa8.31□□□□□ -1.08
CTDSPL2-211ENST00000561189 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
CTDSPL2-211ENST00000561189 DNAJC5Q9H3Z4 198 aa8.3□□□□□ -1.08
CTDSPL2-211ENST00000561189 TRPC6Q9Y210 931 aa8.3□□□□□ -1.08
CTDSPL2-211ENST00000561189 IER5LQ5T953 404 aa8.29□□□□□ -1.08
CTDSPL2-211ENST00000561189 TMEM106CQ9BVX2 250 aa8.28□□□□□ -1.08
CTDSPL2-211ENST00000561189 ATN1P54259 1190 aaPredicted RBP8.26□□□□□ -1.09
CTDSPL2-211ENST00000561189 HS6ST3Q8IZP7 471 aa8.26□□□□□ -1.09
CTDSPL2-211ENST00000561189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-211ENST00000561189 ILDR1Q86SU0 546 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-211ENST00000561189 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
CTDSPL2-211ENST00000561189 ZFP91Q96JP5 570 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-211ENST00000561189 C7P10643 843 aa8.23□□□□□ -1.09
CTDSPL2-211ENST00000561189 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.23□□□□□ -1.09
CTDSPL2-211ENST00000561189 TRIM35Q9UPQ4 493 aa8.23□□□□□ -1.09
CTDSPL2-211ENST00000561189 LHX8Q68G74 356 aa8.21□□□□□ -1.1
CTDSPL2-211ENST00000561189 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
CTDSPL2-211ENST00000561189 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
CTDSPL2-211ENST00000561189 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-211ENST00000561189 STK25O00506 426 aa8.19□□□□□ -1.1
CTDSPL2-211ENST00000561189 SOX12O15370 315 aa8.19□□□□□ -1.1
CTDSPL2-211ENST00000561189 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-211ENST00000561189 HAP1P54257 671 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-211ENST00000561189 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
CTDSPL2-211ENST00000561189 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
CTDSPL2-211ENST00000561189 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
CTDSPL2-211ENST00000561189 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
CTDSPL2-211ENST00000561189 GOLGA2Q08379 1002 aa8.15□□□□□ -1.1
CTDSPL2-211ENST00000561189 CHGAP10645 457 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-211ENST00000561189 OCEL1Q9H607 264 aa8.14□□□□□ -1.11
CTDSPL2-211ENST00000561189 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
CTDSPL2-211ENST00000561189 RYDENQ9NUL5 291 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-211ENST00000561189 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
CTDSPL2-211ENST00000561189 PDCD7Q8N8D1 485 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-211ENST00000561189 FBXO22Q8NEZ5 403 aa8.12□□□□□ -1.11
CTDSPL2-211ENST00000561189 BBXQ8WY36 941 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-211ENST00000561189 NLRP6P59044 892 aa8.1□□□□□ -1.11
CTDSPL2-211ENST00000561189 MFRPQ9BY79 579 aa8.1□□□□□ -1.11
CTDSPL2-211ENST00000561189 PLCG2P16885 1265 aa8.09□□□□□ -1.11
CTDSPL2-211ENST00000561189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.09□□□□□ -1.112e-6■■■□□ 16
CTDSPL2-211ENST00000561189 COLQQ9Y215 455 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-211ENST00000561189 NKX1-1Q15270 411 aaPredicted RBP8.08□□□□□ -1.12
CTDSPL2-211ENST00000561189 SEC24BO95487 1268 aa8.07□□□□□ -1.12
CTDSPL2-211ENST00000561189 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
CTDSPL2-211ENST00000561189 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
CTDSPL2-211ENST00000561189 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL2-211ENST00000561189 PHF8Q9UPP1 1060 aa8.05□□□□□ -1.12
CTDSPL2-211ENST00000561189 PAXIP1Q6ZW49 1069 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-211ENST00000561189 L3MBTL3Q96JM7 780 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-211ENST00000561189 SPRYD3Q8NCJ5 442 aa8.03□□□□□ -1.12
CTDSPL2-211ENST00000561189 POTEB2H3BUK9 544 aa8.02□□□□□ -1.13
CTDSPL2-211ENST00000561189 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
CTDSPL2-211ENST00000561189 MAMSTRQ6ZN01 415 aa8.02□□□□□ -1.13
CTDSPL2-211ENST00000561189 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
CTDSPL2-211ENST00000561189 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
CTDSPL2-211ENST00000561189 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
CTDSPL2-211ENST00000561189 OTUD5Q96G74 571 aa7.98□□□□□ -1.13
CTDSPL2-211ENST00000561189 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
CTDSPL2-211ENST00000561189 MICALL2Q8IY33 904 aa7.96□□□□□ -1.14
CTDSPL2-211ENST00000561189 SCUBE2Q9NQ36 999 aa7.95□□□□□ -1.14
CTDSPL2-211ENST00000561189 BCANQ96GW7 911 aa7.93□□□□□ -1.14
CTDSPL2-211ENST00000561189 G3V3G9 751 aa7.92□□□□□ -1.14
CTDSPL2-211ENST00000561189 PPP1R37O75864 691 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms