RNA–Protein interactions for RNA: ENST00000561068.5

RPS17-208, Transcript of ribosomal protein S17, humanhuman

TSL 3

Gene RPS17, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-208ENST00000561068 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
RPS17-208ENST00000561068 GABBR2O75899 941 aa9.02□□□□□ -0.97
RPS17-208ENST00000561068 RSF1Q96T23 1441 aaPredicted RBP8.98□□□□□ -0.97
RPS17-208ENST00000561068 FARP1Q9Y4F1 1045 aaPredicted RBP8.98□□□□□ -0.97
RPS17-208ENST00000561068 NESP48681 1621 aa8.98□□□□□ -0.97
RPS17-208ENST00000561068 CD44P16070 742 aaKnown RBP8.96□□□□□ -0.98
RPS17-208ENST00000561068 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
RPS17-208ENST00000561068 LAMC3Q9Y6N6 1575 aa8.94□□□□□ -0.98
RPS17-208ENST00000561068 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
RPS17-208ENST00000561068 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.98
RPS17-208ENST00000561068 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
RPS17-208ENST00000561068 ERCC6Q03468 1493 aa8.88□□□□□ -0.99
RPS17-208ENST00000561068 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
RPS17-208ENST00000561068 THOC2Q8NI27 1593 aaKnown RBP8.87□□□□□ -0.99
RPS17-208ENST00000561068 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
RPS17-208ENST00000561068 CUX2O14529 1486 aa8.86□□□□□ -0.99
RPS17-208ENST00000561068 ZRANB1Q9UGI0 708 aa8.84□□□□□ -0.99
RPS17-208ENST00000561068 CFTRP13569 1480 aa8.83□□□□□ -1
RPS17-208ENST00000561068 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
RPS17-208ENST00000561068 LHX8Q68G74 356 aa8.83□□□□□ -1
RPS17-208ENST00000561068 PRDM2Q13029 1718 aa8.83□□□□□ -1
RPS17-208ENST00000561068 CCDC88BA6NC98 1476 aa8.82□□□□□ -1
RPS17-208ENST00000561068 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
RPS17-208ENST00000561068 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
RPS17-208ENST00000561068 WDR62O43379 1518 aa8.76□□□□□ -1.01
RPS17-208ENST00000561068 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
RPS17-208ENST00000561068 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
RPS17-208ENST00000561068 MRC2Q9UBG0 1479 aa8.76□□□□□ -1.01
RPS17-208ENST00000561068 ZNF579Q8NAF0 562 aaKnown RBP8.75□□□□□ -1.01
RPS17-208ENST00000561068 DCBLD2Q96PD2 775 aa8.75□□□□□ -1.01
RPS17-208ENST00000561068 CEP164Q9UPV0 1460 aa8.75□□□□□ -1.01
RPS17-208ENST00000561068 URB2Q14146 1524 aaKnown RBP8.72□□□□□ -1.01
RPS17-208ENST00000561068 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
RPS17-208ENST00000561068 DNAJC5Q9H3Z4 198 aa8.69□□□□□ -1.02
RPS17-208ENST00000561068 PAK3O75914 559 aaPredicted RBP8.66□□□□□ -1.02
RPS17-208ENST00000561068 SUPT5HO00267 1087 aaKnown RBP8.64□□□□□ -1.03
RPS17-208ENST00000561068 NPM1P06748 294 aaKnown RBP eCLIP8.64□□□□□ -1.03
RPS17-208ENST00000561068 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
RPS17-208ENST00000561068 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
RPS17-208ENST00000561068 DNMBPQ6XZF7 1577 aa8.62□□□□□ -1.03
RPS17-208ENST00000561068 CLCN6P51797 869 aa8.62□□□□□ -1.03
RPS17-208ENST00000561068 PELP1Q8IZL8 1130 aaKnown RBP8.62□□□□□ -1.03
RPS17-208ENST00000561068 PROM2Q8N271 834 aa8.62□□□□□ -1.03
RPS17-208ENST00000561068 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
RPS17-208ENST00000561068 POTEB2H3BUK9 544 aa8.61□□□□□ -1.03
RPS17-208ENST00000561068 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
RPS17-208ENST00000561068 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
RPS17-208ENST00000561068 ZNF608Q9ULD9 1512 aaPredicted RBP8.57□□□□□ -1.04
RPS17-208ENST00000561068 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
RPS17-208ENST00000561068 CUX1P39880 1505 aa8.56□□□□□ -1.04
RPS17-208ENST00000561068 MIER1Q8N108 512 aa8.56□□□□□ -1.04
RPS17-208ENST00000561068 POLA1P09884 1462 aaPredicted RBP8.56□□□□□ -1.04
RPS17-208ENST00000561068 OTUD5Q96G74 571 aa8.54□□□□□ -1.04
RPS17-208ENST00000561068 EIF4G3O43432 1585 aaKnown RBP8.53□□□□□ -1.04
RPS17-208ENST00000561068 RAD54L2Q9Y4B4 1467 aa8.52□□□□□ -1.05
RPS17-208ENST00000561068 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
RPS17-208ENST00000561068 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
RPS17-208ENST00000561068 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
RPS17-208ENST00000561068 TRPC6Q9Y210 931 aa8.51□□□□□ -1.05
RPS17-208ENST00000561068 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
RPS17-208ENST00000561068 SOGA1O94964 1423 aa8.51□□□□□ -1.05
RPS17-208ENST00000561068 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.052e-9■■■□□ 16.3
RPS17-208ENST00000561068 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
RPS17-208ENST00000561068 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
RPS17-208ENST00000561068 KIF12Q96FN5 646 aa8.48□□□□□ -1.05
RPS17-208ENST00000561068 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
RPS17-208ENST00000561068 CHD1O14646 1710 aa8.48□□□□□ -1.05
RPS17-208ENST00000561068 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
RPS17-208ENST00000561068 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
RPS17-208ENST00000561068 POTEJP0CG39 1038 aa8.47□□□□□ -1.05
RPS17-208ENST00000561068 ATN1P54259 1190 aaPredicted RBP8.47□□□□□ -1.05
RPS17-208ENST00000561068 FKBP8Q14318 412 aa8.47□□□□□ -1.05
RPS17-208ENST00000561068 ASTLQ6HA08 431 aaPredicted RBP8.47□□□□□ -1.05
RPS17-208ENST00000561068 PLCD3Q8N3E9 789 aa8.47□□□□□ -1.05
RPS17-208ENST00000561068 MAP3K13O43283 966 aa8.46□□□□□ -1.06
RPS17-208ENST00000561068 TDRD9Q8NDG6 1382 aaKnown RBP8.46□□□□□ -1.06
RPS17-208ENST00000561068 PBRM1Q86U86 1689 aa8.45□□□□□ -1.06
RPS17-208ENST00000561068 ABCA10Q8WWZ4 1543 aa8.44□□□□□ -1.06
RPS17-208ENST00000561068 ABCA5Q8WWZ7 1642 aa8.44□□□□□ -1.06
RPS17-208ENST00000561068 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
RPS17-208ENST00000561068 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
RPS17-208ENST00000561068 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
RPS17-208ENST00000561068 GRIN2BQ13224 1484 aa8.41□□□□□ -1.06
RPS17-208ENST00000561068 GAPVD1Q14C86 1478 aa8.41□□□□□ -1.06
RPS17-208ENST00000561068 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
RPS17-208ENST00000561068 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
RPS17-208ENST00000561068 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
RPS17-208ENST00000561068 C7P10643 843 aa8.4□□□□□ -1.06
RPS17-208ENST00000561068 RIMBP3CA6NJZ7 1639 aa8.4□□□□□ -1.07
RPS17-208ENST00000561068 RIMBP3BA6NNM3 1639 aa8.4□□□□□ -1.07
RPS17-208ENST00000561068 RIMBP3Q9UFD9 1639 aa8.4□□□□□ -1.07
RPS17-208ENST00000561068 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
RPS17-208ENST00000561068 POTEFA5A3E0 1075 aa8.38□□□□□ -1.07
RPS17-208ENST00000561068 NUBP1P53384 320 aa8.37□□□□□ -1.07
RPS17-208ENST00000561068 SYNJ2O15056 1496 aa8.37□□□□□ -1.07
RPS17-208ENST00000561068 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
RPS17-208ENST00000561068 ARHGEF11O15085 1522 aa8.35□□□□□ -1.07
RPS17-208ENST00000561068 COLQQ9Y215 455 aaPredicted RBP8.35□□□□□ -1.07
RPS17-208ENST00000561068 ERICH3Q5RHP9 1530 aa8.34□□□□□ -1.07
RPS17-208ENST00000561068 TTLL13PA6NNM8 815 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms