RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
USP8-213ENST00000560885 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
USP8-213ENST00000560885 CHD1O14646 1710 aa12.11□□□□□ -0.47
USP8-213ENST00000560885 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
USP8-213ENST00000560885 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
USP8-213ENST00000560885 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
USP8-213ENST00000560885 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
USP8-213ENST00000560885 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
USP8-213ENST00000560885 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.483e-6■■□□□ 13.1
USP8-213ENST00000560885 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
USP8-213ENST00000560885 ARAP1Q96P48 1450 aa12□□□□□ -0.49
USP8-213ENST00000560885 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
USP8-213ENST00000560885 FBLN2P98095 1184 aa11.97□□□□□ -0.49
USP8-213ENST00000560885 SOGA1O94964 1423 aa11.94□□□□□ -0.5
USP8-213ENST00000560885 RAD54L2Q9Y4B4 1467 aa11.94□□□□□ -0.5
USP8-213ENST00000560885 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
USP8-213ENST00000560885 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
USP8-213ENST00000560885 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
USP8-213ENST00000560885 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
USP8-213ENST00000560885 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
USP8-213ENST00000560885 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
USP8-213ENST00000560885 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
USP8-213ENST00000560885 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
USP8-213ENST00000560885 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
USP8-213ENST00000560885 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
USP8-213ENST00000560885 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
USP8-213ENST00000560885 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
USP8-213ENST00000560885 CUX1P39880 1505 aa11.86□□□□□ -0.51
USP8-213ENST00000560885 SYNJ2O15056 1496 aa11.86□□□□□ -0.51
USP8-213ENST00000560885 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.525e-6■■■□□ 14.9
USP8-213ENST00000560885 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
USP8-213ENST00000560885 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
USP8-213ENST00000560885 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
USP8-213ENST00000560885 HAX1O00165 279 aa11.78□□□□□ -0.52
USP8-213ENST00000560885 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
USP8-213ENST00000560885 ABCA10Q8WWZ4 1543 aa11.77□□□□□ -0.52
USP8-213ENST00000560885 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
USP8-213ENST00000560885 GRIN2AQ12879 1464 aa11.72□□□□□ -0.53
USP8-213ENST00000560885 SHROOM2Q13796 1616 aa11.7□□□□□ -0.54
USP8-213ENST00000560885 ADAMTS12P58397 1594 aa11.7□□□□□ -0.54
USP8-213ENST00000560885 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
USP8-213ENST00000560885 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
USP8-213ENST00000560885 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
USP8-213ENST00000560885 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
USP8-213ENST00000560885 NUP160Q12769 1436 aa11.68□□□□□ -0.54
USP8-213ENST00000560885 TOP2BQ02880 1626 aa11.67□□□□□ -0.54
USP8-213ENST00000560885 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
USP8-213ENST00000560885 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
USP8-213ENST00000560885 ERICH3Q5RHP9 1530 aa11.64□□□□□ -0.55
USP8-213ENST00000560885 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
USP8-213ENST00000560885 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
USP8-213ENST00000560885 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
USP8-213ENST00000560885 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
USP8-213ENST00000560885 PRG4Q92954 1404 aaPredicted RBP11.57□□□□□ -0.56
USP8-213ENST00000560885 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
USP8-213ENST00000560885 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
USP8-213ENST00000560885 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
USP8-213ENST00000560885 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
USP8-213ENST00000560885 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
USP8-213ENST00000560885 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
USP8-213ENST00000560885 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
USP8-213ENST00000560885 ADCY10Q96PN6 1610 aa11.5□□□□□ -0.57
USP8-213ENST00000560885 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP8-213ENST00000560885 EVX2Q03828 476 aa11.5□□□□□ -0.57
USP8-213ENST00000560885 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
USP8-213ENST00000560885 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
USP8-213ENST00000560885 CUL7Q14999 1698 aa11.46□□□□□ -0.57
USP8-213ENST00000560885 KDM6BO15054 1643 aa11.46□□□□□ -0.57
USP8-213ENST00000560885 TSPOAP1O95153 1857 aa11.46□□□□□ -0.58
USP8-213ENST00000560885 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
USP8-213ENST00000560885 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
USP8-213ENST00000560885 ZBTB22O15209 634 aa11.42□□□□□ -0.58
USP8-213ENST00000560885 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
USP8-213ENST00000560885 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
USP8-213ENST00000560885 IGF1RP08069 1367 aa11.4□□□□□ -0.59
USP8-213ENST00000560885 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
USP8-213ENST00000560885 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
USP8-213ENST00000560885 PTPRGP23470 1445 aa11.36□□□□□ -0.59
USP8-213ENST00000560885 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
USP8-213ENST00000560885 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
USP8-213ENST00000560885 GLI2P10070 1586 aa11.35□□□□□ -0.59
USP8-213ENST00000560885 PPRC1Q5VV67 1664 aaKnown RBP11.35□□□□□ -0.59
USP8-213ENST00000560885 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
USP8-213ENST00000560885 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
USP8-213ENST00000560885 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
USP8-213ENST00000560885 TNIKQ9UKE5 1360 aa11.33□□□□□ -0.6
USP8-213ENST00000560885 GABBR2O75899 941 aa11.33□□□□□ -0.6
USP8-213ENST00000560885 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
USP8-213ENST00000560885 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
USP8-213ENST00000560885 UHRF1BP1LA0JNW5 1464 aa11.32□□□□□ -0.6
USP8-213ENST00000560885 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
USP8-213ENST00000560885 MAP3K4Q9Y6R4 1608 aa11.3□□□□□ -0.6
USP8-213ENST00000560885 LHX8Q68G74 356 aa11.29□□□□□ -0.6
USP8-213ENST00000560885 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
USP8-213ENST00000560885 UACAQ9BZF9 1416 aa11.27□□□□□ -0.6
USP8-213ENST00000560885 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
USP8-213ENST00000560885 KDM5BQ9UGL1 1544 aa11.27□□□□□ -0.61
USP8-213ENST00000560885 ZCCHC11Q5TAX3 1644 aaKnown RBP11.27□□□□□ -0.61
USP8-213ENST00000560885 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
USP8-213ENST00000560885 TEX14Q8IWB6 1497 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms