RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 ATMINO43313 823 aaPredicted RBP15.83■□□□□ 0.12
CRNDE-208ENST00000560029 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
CRNDE-208ENST00000560029 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
CRNDE-208ENST00000560029 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
CRNDE-208ENST00000560029 KIF12Q96FN5 646 aa15.8■□□□□ 0.12
CRNDE-208ENST00000560029 METRNQ9UJH8 293 aa15.79■□□□□ 0.12
CRNDE-208ENST00000560029 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
CRNDE-208ENST00000560029 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
CRNDE-208ENST00000560029 MAP3K13O43283 966 aa15.73■□□□□ 0.11
CRNDE-208ENST00000560029 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
CRNDE-208ENST00000560029 FKBP8Q14318 412 aa15.72■□□□□ 0.11
CRNDE-208ENST00000560029 SLC39A7Q92504 469 aa15.71■□□□□ 0.11
CRNDE-208ENST00000560029 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
CRNDE-208ENST00000560029 C7P10643 843 aa15.7■□□□□ 0.1
CRNDE-208ENST00000560029 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
CRNDE-208ENST00000560029 NUBP1P53384 320 aa15.59■□□□□ 0.09
CRNDE-208ENST00000560029 PLSCR2Q9NRY7 297 aa15.59■□□□□ 0.09
CRNDE-208ENST00000560029 POTEFA5A3E0 1075 aa15.56■□□□□ 0.08
CRNDE-208ENST00000560029 TIE1P35590 1138 aa15.54■□□□□ 0.08
CRNDE-208ENST00000560029 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
CRNDE-208ENST00000560029 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
CRNDE-208ENST00000560029 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
CRNDE-208ENST00000560029 POTEMA6NI47 508 aa15.49■□□□□ 0.07
CRNDE-208ENST00000560029 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
CRNDE-208ENST00000560029 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
CRNDE-208ENST00000560029 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
CRNDE-208ENST00000560029 POTEGQ6S5H5 508 aa15.45■□□□□ 0.06
CRNDE-208ENST00000560029 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CRNDE-208ENST00000560029 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
CRNDE-208ENST00000560029 SEC24BO95487 1268 aa15.43■□□□□ 0.06
CRNDE-208ENST00000560029 SCUBE2Q9NQ36 999 aa15.43■□□□□ 0.06
CRNDE-208ENST00000560029 SGIP1Q9BQI5 828 aa15.41■□□□□ 0.06
CRNDE-208ENST00000560029 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
CRNDE-208ENST00000560029 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
CRNDE-208ENST00000560029 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
CRNDE-208ENST00000560029 PYGBP11216 843 aa15.36■□□□□ 0.05
CRNDE-208ENST00000560029 LCE2DQ5TA82 110 aaPredicted RBP15.33■□□□□ 0.04
CRNDE-208ENST00000560029 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
CRNDE-208ENST00000560029 IER5LQ5T953 404 aa15.29■□□□□ 0.04
CRNDE-208ENST00000560029 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
CRNDE-208ENST00000560029 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
CRNDE-208ENST00000560029 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
CRNDE-208ENST00000560029 PLCG2P16885 1265 aa15.19■□□□□ 0.02
CRNDE-208ENST00000560029 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
CRNDE-208ENST00000560029 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
CRNDE-208ENST00000560029 OCEL1Q9H607 264 aa15.09■□□□□ 0.01
CRNDE-208ENST00000560029 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
CRNDE-208ENST00000560029 GSE1Q14687 1217 aa15.07■□□□□ 0
CRNDE-208ENST00000560029 ST18O60284 1047 aa15.01□□□□□ -0.01
CRNDE-208ENST00000560029 ZNF467Q7Z7K2 595 aaPredicted RBP14.99□□□□□ -0.01
CRNDE-208ENST00000560029 IFNLR1Q8IU57 520 aaPredicted RBP14.97□□□□□ -0.01
CRNDE-208ENST00000560029 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
CRNDE-208ENST00000560029 PSEN1P49768 467 aa14.95□□□□□ -0.02
CRNDE-208ENST00000560029 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
CRNDE-208ENST00000560029 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
CRNDE-208ENST00000560029 PDCD7Q8N8D1 485 aaKnown RBP14.94□□□□□ -0.02
CRNDE-208ENST00000560029 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
CRNDE-208ENST00000560029 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
CRNDE-208ENST00000560029 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
CRNDE-208ENST00000560029 SPOCK2Q92563 424 aa14.91□□□□□ -0.02
CRNDE-208ENST00000560029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
CRNDE-208ENST00000560029 PDAP1Q13442 181 aaKnown RBP14.82□□□□□ -0.04
CRNDE-208ENST00000560029 DPY19L2Q6NUT2 758 aa14.82□□□□□ -0.04
CRNDE-208ENST00000560029 C3orf67Q6ZVT6 689 aa14.82□□□□□ -0.04
CRNDE-208ENST00000560029 MARVELD3Q96A59 401 aa14.82□□□□□ -0.04
CRNDE-208ENST00000560029 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
CRNDE-208ENST00000560029 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
CRNDE-208ENST00000560029 SNPHO15079 494 aa14.78□□□□□ -0.04
CRNDE-208ENST00000560029 TMEM121BQ9BXQ6 578 aaPredicted RBP14.72□□□□□ -0.05
CRNDE-208ENST00000560029 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
CRNDE-208ENST00000560029 BOLA1Q9Y3E2 137 aa14.64□□□□□ -0.07
CRNDE-208ENST00000560029 EMP3P54852 163 aa14.63□□□□□ -0.07
CRNDE-208ENST00000560029 G3V3G9 751 aa14.61□□□□□ -0.07
CRNDE-208ENST00000560029 EFCAB3Q8N7B9 438 aa14.61□□□□□ -0.07
CRNDE-208ENST00000560029 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
CRNDE-208ENST00000560029 POTEBQ6S5H4 581 aa14.58□□□□□ -0.08
CRNDE-208ENST00000560029 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
CRNDE-208ENST00000560029 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
CRNDE-208ENST00000560029 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
CRNDE-208ENST00000560029 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
CRNDE-208ENST00000560029 HS3ST6Q96QI5 342 aa14.52□□□□□ -0.09
CRNDE-208ENST00000560029 HOXB3P14651 431 aaPredicted RBP14.51□□□□□ -0.09
CRNDE-208ENST00000560029 RNF25Q96BH1 459 aaPredicted RBP14.5□□□□□ -0.09
CRNDE-208ENST00000560029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
CRNDE-208ENST00000560029 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
CRNDE-208ENST00000560029 ZFP91Q96JP5 570 aaPredicted RBP14.46□□□□□ -0.09
CRNDE-208ENST00000560029 KRTAP3-3Q9BYR6 98 aa14.45□□□□□ -0.1
CRNDE-208ENST00000560029 KRTAP3-2Q9BYR7 98 aa14.45□□□□□ -0.1
CRNDE-208ENST00000560029 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
CRNDE-208ENST00000560029 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
CRNDE-208ENST00000560029 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
CRNDE-208ENST00000560029 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
CRNDE-208ENST00000560029 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
CRNDE-208ENST00000560029 VGFO15240 615 aaPredicted RBP14.37□□□□□ -0.11
CRNDE-208ENST00000560029 DOK7Q18PE1 504 aa14.37□□□□□ -0.11
CRNDE-208ENST00000560029 SOX12O15370 315 aa14.36□□□□□ -0.11
CRNDE-208ENST00000560029 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
CRNDE-208ENST00000560029 ERBB3P21860 1342 aa14.33□□□□□ -0.12
CRNDE-208ENST00000560029 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
CRNDE-208ENST00000560029 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms