RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
AP3S2-210ENST00000559601 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
AP3S2-210ENST00000559601 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
AP3S2-210ENST00000559601 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
AP3S2-210ENST00000559601 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
AP3S2-210ENST00000559601 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
AP3S2-210ENST00000559601 MIER1Q8N108 512 aa12.02□□□□□ -0.49
AP3S2-210ENST00000559601 C7P10643 843 aa12.01□□□□□ -0.49
AP3S2-210ENST00000559601 FKBP8Q14318 412 aa12□□□□□ -0.49
AP3S2-210ENST00000559601 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
AP3S2-210ENST00000559601 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
AP3S2-210ENST00000559601 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
AP3S2-210ENST00000559601 MAMSTRQ6ZN01 415 aa11.95□□□□□ -0.5
AP3S2-210ENST00000559601 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
AP3S2-210ENST00000559601 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
AP3S2-210ENST00000559601 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
AP3S2-210ENST00000559601 LCE2DQ5TA82 110 aaPredicted RBP11.92□□□□□ -0.5
AP3S2-210ENST00000559601 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
AP3S2-210ENST00000559601 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
AP3S2-210ENST00000559601 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
AP3S2-210ENST00000559601 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
AP3S2-210ENST00000559601 NUBP1P53384 320 aa11.86□□□□□ -0.51
AP3S2-210ENST00000559601 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
AP3S2-210ENST00000559601 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
AP3S2-210ENST00000559601 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
AP3S2-210ENST00000559601 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
AP3S2-210ENST00000559601 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
AP3S2-210ENST00000559601 MAP3K13O43283 966 aa11.8□□□□□ -0.52
AP3S2-210ENST00000559601 TIE1P35590 1138 aa11.8□□□□□ -0.52
AP3S2-210ENST00000559601 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
AP3S2-210ENST00000559601 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
AP3S2-210ENST00000559601 TTLL13PA6NNM8 815 aa11.7□□□□□ -0.54
AP3S2-210ENST00000559601 SEC24BO95487 1268 aa11.7□□□□□ -0.54
AP3S2-210ENST00000559601 PCDHB13Q9Y5F0 798 aa11.7□□□□□ -0.54
AP3S2-210ENST00000559601 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
AP3S2-210ENST00000559601 IER5LQ5T953 404 aa11.65□□□□□ -0.54
AP3S2-210ENST00000559601 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
AP3S2-210ENST00000559601 IFNL1Q8IU54 200 aa11.64□□□□□ -0.55
AP3S2-210ENST00000559601 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
AP3S2-210ENST00000559601 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
AP3S2-210ENST00000559601 GSE1Q14687 1217 aa11.57□□□□□ -0.56
AP3S2-210ENST00000559601 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
AP3S2-210ENST00000559601 ST18O60284 1047 aa11.54□□□□□ -0.56
AP3S2-210ENST00000559601 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
AP3S2-210ENST00000559601 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
AP3S2-210ENST00000559601 PYGBP11216 843 aa11.53□□□□□ -0.56
AP3S2-210ENST00000559601 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
AP3S2-210ENST00000559601 PLCG2P16885 1265 aa11.48□□□□□ -0.57
AP3S2-210ENST00000559601 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
AP3S2-210ENST00000559601 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
AP3S2-210ENST00000559601 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
AP3S2-210ENST00000559601 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
AP3S2-210ENST00000559601 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
AP3S2-210ENST00000559601 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
AP3S2-210ENST00000559601 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
AP3S2-210ENST00000559601 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
AP3S2-210ENST00000559601 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
AP3S2-210ENST00000559601 MARVELD3Q96A59 401 aa11.34□□□□□ -0.59
AP3S2-210ENST00000559601 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
AP3S2-210ENST00000559601 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
AP3S2-210ENST00000559601 SNPHO15079 494 aa11.31□□□□□ -0.6
AP3S2-210ENST00000559601 PSEN1P49768 467 aa11.31□□□□□ -0.6
AP3S2-210ENST00000559601 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
AP3S2-210ENST00000559601 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
AP3S2-210ENST00000559601 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
AP3S2-210ENST00000559601 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
AP3S2-210ENST00000559601 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
AP3S2-210ENST00000559601 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
AP3S2-210ENST00000559601 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
AP3S2-210ENST00000559601 EMP3P54852 163 aa11.2□□□□□ -0.62
AP3S2-210ENST00000559601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
AP3S2-210ENST00000559601 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
AP3S2-210ENST00000559601 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
AP3S2-210ENST00000559601 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
AP3S2-210ENST00000559601 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
AP3S2-210ENST00000559601 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
AP3S2-210ENST00000559601 HS3ST6Q96QI5 342 aa11.13□□□□□ -0.63
AP3S2-210ENST00000559601 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
AP3S2-210ENST00000559601 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
AP3S2-210ENST00000559601 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
AP3S2-210ENST00000559601 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
AP3S2-210ENST00000559601 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
AP3S2-210ENST00000559601 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
AP3S2-210ENST00000559601 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
AP3S2-210ENST00000559601 EFCAB3Q8N7B9 438 aa11.03□□□□□ -0.64
AP3S2-210ENST00000559601 G3V3G9 751 aa11.02□□□□□ -0.65
AP3S2-210ENST00000559601 SOX12O15370 315 aa11.01□□□□□ -0.65
AP3S2-210ENST00000559601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
AP3S2-210ENST00000559601 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
AP3S2-210ENST00000559601 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
AP3S2-210ENST00000559601 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.65
AP3S2-210ENST00000559601 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
AP3S2-210ENST00000559601 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
AP3S2-210ENST00000559601 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
AP3S2-210ENST00000559601 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
AP3S2-210ENST00000559601 ERBB3P21860 1342 aa10.89□□□□□ -0.67
AP3S2-210ENST00000559601 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
AP3S2-210ENST00000559601 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
AP3S2-210ENST00000559601 RNF166Q96A37 237 aaPredicted RBP10.86□□□□□ -0.67
AP3S2-210ENST00000559601 NLRP6P59044 892 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms