RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
AC090888.3-201ENST00000558917 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
AC090888.3-201ENST00000558917 LHX8Q68G74 356 aa14.17□□□□□ -0.14
AC090888.3-201ENST00000558917 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
AC090888.3-201ENST00000558917 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
AC090888.3-201ENST00000558917 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
AC090888.3-201ENST00000558917 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
AC090888.3-201ENST00000558917 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
AC090888.3-201ENST00000558917 PROM2Q8N271 834 aa14.07□□□□□ -0.16
AC090888.3-201ENST00000558917 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
AC090888.3-201ENST00000558917 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
AC090888.3-201ENST00000558917 NESP48681 1621 aa14.01□□□□□ -0.17
AC090888.3-201ENST00000558917 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
AC090888.3-201ENST00000558917 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
AC090888.3-201ENST00000558917 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
AC090888.3-201ENST00000558917 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
AC090888.3-201ENST00000558917 MIER1Q8N108 512 aa13.9□□□□□ -0.18
AC090888.3-201ENST00000558917 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
AC090888.3-201ENST00000558917 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
AC090888.3-201ENST00000558917 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
AC090888.3-201ENST00000558917 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
AC090888.3-201ENST00000558917 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
AC090888.3-201ENST00000558917 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
AC090888.3-201ENST00000558917 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
AC090888.3-201ENST00000558917 FKBP8Q14318 412 aa13.75□□□□□ -0.21
AC090888.3-201ENST00000558917 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
AC090888.3-201ENST00000558917 ATAD2BQ9ULI0 1458 aa13.73□□□□□ -0.21
AC090888.3-201ENST00000558917 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
AC090888.3-201ENST00000558917 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
AC090888.3-201ENST00000558917 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
AC090888.3-201ENST00000558917 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
AC090888.3-201ENST00000558917 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
AC090888.3-201ENST00000558917 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
AC090888.3-201ENST00000558917 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
AC090888.3-201ENST00000558917 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
AC090888.3-201ENST00000558917 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
AC090888.3-201ENST00000558917 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
AC090888.3-201ENST00000558917 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
AC090888.3-201ENST00000558917 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
AC090888.3-201ENST00000558917 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
AC090888.3-201ENST00000558917 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
AC090888.3-201ENST00000558917 MAP3K13O43283 966 aa13.64□□□□□ -0.23
AC090888.3-201ENST00000558917 C7P10643 843 aa13.64□□□□□ -0.23
AC090888.3-201ENST00000558917 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
AC090888.3-201ENST00000558917 ATN1P54259 1190 aaPredicted RBP13.61□□□□□ -0.23
AC090888.3-201ENST00000558917 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
AC090888.3-201ENST00000558917 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
AC090888.3-201ENST00000558917 WDR62O43379 1518 aa13.57□□□□□ -0.24
AC090888.3-201ENST00000558917 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
AC090888.3-201ENST00000558917 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
AC090888.3-201ENST00000558917 NUBP1P53384 320 aa13.55□□□□□ -0.24
AC090888.3-201ENST00000558917 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
AC090888.3-201ENST00000558917 TIE1P35590 1138 aa13.53□□□□□ -0.24
AC090888.3-201ENST00000558917 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
AC090888.3-201ENST00000558917 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
AC090888.3-201ENST00000558917 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
AC090888.3-201ENST00000558917 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
AC090888.3-201ENST00000558917 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
AC090888.3-201ENST00000558917 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
AC090888.3-201ENST00000558917 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
AC090888.3-201ENST00000558917 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
AC090888.3-201ENST00000558917 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
AC090888.3-201ENST00000558917 TTLL13PA6NNM8 815 aa13.46□□□□□ -0.25
AC090888.3-201ENST00000558917 MAMSTRQ6ZN01 415 aa13.46□□□□□ -0.25
AC090888.3-201ENST00000558917 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
AC090888.3-201ENST00000558917 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
AC090888.3-201ENST00000558917 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
AC090888.3-201ENST00000558917 SEC24BO95487 1268 aa13.41□□□□□ -0.26
AC090888.3-201ENST00000558917 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
AC090888.3-201ENST00000558917 ARAP1Q96P48 1450 aa13.41□□□□□ -0.26
AC090888.3-201ENST00000558917 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
AC090888.3-201ENST00000558917 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
AC090888.3-201ENST00000558917 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
AC090888.3-201ENST00000558917 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
AC090888.3-201ENST00000558917 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
AC090888.3-201ENST00000558917 POTEMA6NI47 508 aa13.34□□□□□ -0.27
AC090888.3-201ENST00000558917 PYGBP11216 843 aa13.34□□□□□ -0.27
AC090888.3-201ENST00000558917 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
AC090888.3-201ENST00000558917 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
AC090888.3-201ENST00000558917 IER5LQ5T953 404 aa13.32□□□□□ -0.28
AC090888.3-201ENST00000558917 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
AC090888.3-201ENST00000558917 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
AC090888.3-201ENST00000558917 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
AC090888.3-201ENST00000558917 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
AC090888.3-201ENST00000558917 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
AC090888.3-201ENST00000558917 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
AC090888.3-201ENST00000558917 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
AC090888.3-201ENST00000558917 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
AC090888.3-201ENST00000558917 PLCG2P16885 1265 aa13.22□□□□□ -0.29
AC090888.3-201ENST00000558917 GSE1Q14687 1217 aa13.2□□□□□ -0.3
AC090888.3-201ENST00000558917 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
AC090888.3-201ENST00000558917 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
AC090888.3-201ENST00000558917 LCE2DQ5TA82 110 aaPredicted RBP13.16□□□□□ -0.3
AC090888.3-201ENST00000558917 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
AC090888.3-201ENST00000558917 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
AC090888.3-201ENST00000558917 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
AC090888.3-201ENST00000558917 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
AC090888.3-201ENST00000558917 CHD1O14646 1710 aa13.12□□□□□ -0.31
AC090888.3-201ENST00000558917 PCDH10Q9P2E7 1040 aa13.1□□□□□ -0.31
AC090888.3-201ENST00000558917 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms