RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 CDK11BP21127 795 aaKnown RBP21.18■□□□□ 0.98
SHISA9-203ENST00000558583 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
SHISA9-203ENST00000558583 TAOK2Q9UL54 1235 aa21.16■□□□□ 0.98
SHISA9-203ENST00000558583 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
SHISA9-203ENST00000558583 AMER1Q5JTC6 1135 aaPredicted RBP21.03■□□□□ 0.96
SHISA9-203ENST00000558583 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.95
SHISA9-203ENST00000558583 TMC1Q8TDI8 760 aa21■□□□□ 0.95
SHISA9-203ENST00000558583 NCLP19338 710 aaKnown RBP20.99■□□□□ 0.95
SHISA9-203ENST00000558583 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
SHISA9-203ENST00000558583 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
SHISA9-203ENST00000558583 MIER1Q8N108 512 aa20.93■□□□□ 0.94
SHISA9-203ENST00000558583 MLECQ14165 292 aa20.92■□□□□ 0.94
SHISA9-203ENST00000558583 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
SHISA9-203ENST00000558583 TRIM44Q96DX7 344 aaPredicted RBP20.91■□□□□ 0.94
SHISA9-203ENST00000558583 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
SHISA9-203ENST00000558583 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
SHISA9-203ENST00000558583 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
SHISA9-203ENST00000558583 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
SHISA9-203ENST00000558583 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
SHISA9-203ENST00000558583 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
SHISA9-203ENST00000558583 DNTTIP2Q5QJE6 756 aaKnown RBP20.84■□□□□ 0.93
SHISA9-203ENST00000558583 NAP1L5Q96NT1 182 aaPredicted RBP20.83■□□□□ 0.93
SHISA9-203ENST00000558583 RGL3Q3MIN7 710 aa20.83■□□□□ 0.92
SHISA9-203ENST00000558583 CLSTN1O94985 981 aa20.81■□□□□ 0.92
SHISA9-203ENST00000558583 SOX12O15370 315 aa20.81■□□□□ 0.92
SHISA9-203ENST00000558583 PTMAP06454 111 aaKnown RBP20.81■□□□□ 0.92
SHISA9-203ENST00000558583 PLCB2Q00722 1185 aa20.76■□□□□ 0.91
SHISA9-203ENST00000558583 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
SHISA9-203ENST00000558583 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
SHISA9-203ENST00000558583 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.74■□□□□ 0.91
SHISA9-203ENST00000558583 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
SHISA9-203ENST00000558583 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
SHISA9-203ENST00000558583 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
SHISA9-203ENST00000558583 TNNT2P45379 298 aaPredicted RBP20.68■□□□□ 0.9
SHISA9-203ENST00000558583 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
SHISA9-203ENST00000558583 BECN1Q14457 450 aa20.66■□□□□ 0.9
SHISA9-203ENST00000558583 ARID3AQ99856 593 aa20.66■□□□□ 0.9
SHISA9-203ENST00000558583 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
SHISA9-203ENST00000558583 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
SHISA9-203ENST00000558583 POGKQ9P215 609 aa20.65■□□□□ 0.9
SHISA9-203ENST00000558583 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
SHISA9-203ENST00000558583 NAP1L2Q9ULW6 460 aaPredicted RBP20.64■□□□□ 0.89
SHISA9-203ENST00000558583 DDRGK1Q96HY6 314 aa20.63■□□□□ 0.89
SHISA9-203ENST00000558583 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
SHISA9-203ENST00000558583 SPRYD3Q8NCJ5 442 aa20.62■□□□□ 0.89
SHISA9-203ENST00000558583 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
SHISA9-203ENST00000558583 RGS3P49796 1198 aa20.59■□□□□ 0.89
SHISA9-203ENST00000558583 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
SHISA9-203ENST00000558583 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.88
SHISA9-203ENST00000558583 OS9Q13438 667 aaPredicted RBP20.57■□□□□ 0.88
SHISA9-203ENST00000558583 ZRSR1Q15695 479 aaKnown RBP20.56■□□□□ 0.88
SHISA9-203ENST00000558583 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
SHISA9-203ENST00000558583 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
SHISA9-203ENST00000558583 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
SHISA9-203ENST00000558583 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
SHISA9-203ENST00000558583 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
SHISA9-203ENST00000558583 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
SHISA9-203ENST00000558583 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
SHISA9-203ENST00000558583 PRM3Q9NNZ6 103 aa20.44■□□□□ 0.86
SHISA9-203ENST00000558583 CSB-PGBD3P0DP91 1061 aa20.43■□□□□ 0.86
SHISA9-203ENST00000558583 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
SHISA9-203ENST00000558583 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
SHISA9-203ENST00000558583 FGD1P98174 961 aa20.42■□□□□ 0.86
SHISA9-203ENST00000558583 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
SHISA9-203ENST00000558583 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
SHISA9-203ENST00000558583 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
SHISA9-203ENST00000558583 ERICH6BQ5W0A0 696 aa20.4■□□□□ 0.86
SHISA9-203ENST00000558583 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
SHISA9-203ENST00000558583 STK26Q9P289 416 aa20.38■□□□□ 0.85
SHISA9-203ENST00000558583 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
SHISA9-203ENST00000558583 EIF4G2P78344 907 aaKnown RBP eCLIP20.38■□□□□ 0.85
SHISA9-203ENST00000558583 DEKP35659 375 aaKnown RBP20.37■□□□□ 0.85
SHISA9-203ENST00000558583 KNSTRNQ9Y448 316 aa20.37■□□□□ 0.85
SHISA9-203ENST00000558583 KCNJ4P48050 445 aa20.36■□□□□ 0.85
SHISA9-203ENST00000558583 G3V3G9 751 aa20.35■□□□□ 0.85
SHISA9-203ENST00000558583 DCAF8Q5TAQ9 597 aa20.35■□□□□ 0.85
SHISA9-203ENST00000558583 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
SHISA9-203ENST00000558583 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
SHISA9-203ENST00000558583 CFDP1Q9UEE9 299 aaPredicted RBP20.34■□□□□ 0.85
SHISA9-203ENST00000558583 KLHL34Q8N239 644 aa20.32■□□□□ 0.84
SHISA9-203ENST00000558583 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
SHISA9-203ENST00000558583 MSH5O43196 834 aa20.31■□□□□ 0.84
SHISA9-203ENST00000558583 DRC7Q8IY82 874 aa20.29■□□□□ 0.84
SHISA9-203ENST00000558583 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
SHISA9-203ENST00000558583 GGT6Q6P531 493 aa20.28■□□□□ 0.84
SHISA9-203ENST00000558583 MEX3CQ5U5Q3 659 aaKnown RBP20.26■□□□□ 0.83
SHISA9-203ENST00000558583 PDE4CQ08493 712 aa20.26■□□□□ 0.83
SHISA9-203ENST00000558583 CARD11Q9BXL7 1154 aa20.25■□□□□ 0.83
SHISA9-203ENST00000558583 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
SHISA9-203ENST00000558583 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
SHISA9-203ENST00000558583 MSNP26038 577 aaKnown RBP20.23■□□□□ 0.83
SHISA9-203ENST00000558583 APBB1O00213 710 aa20.23■□□□□ 0.83
SHISA9-203ENST00000558583 CHMP3Q9Y3E7 222 aa20.19■□□□□ 0.82
SHISA9-203ENST00000558583 GOLGA6L6A8MZA4 724 aa20.19■□□□□ 0.82
SHISA9-203ENST00000558583 PPP4R2Q9NY27 417 aa20.19■□□□□ 0.82
SHISA9-203ENST00000558583 HDGFP51858 240 aaKnown RBP20.19■□□□□ 0.82
SHISA9-203ENST00000558583 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
SHISA9-203ENST00000558583 SIN3AQ96ST3 1273 aa20.17■□□□□ 0.82
SHISA9-203ENST00000558583 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
SHISA9-203ENST00000558583 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 732.5 ms