RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 FBLN2P98095 1184 aa3.29□□□□□ -1.88
CTDSPL2-202ENST00000558373 ZNF692Q9BU19 519 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL2-202ENST00000558373 ASTLQ6HA08 431 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL2-202ENST00000558373 PLSCR2Q9NRY7 297 aa3.28□□□□□ -1.88
CTDSPL2-202ENST00000558373 GALR2O43603 387 aaPredicted RBP3.27□□□□□ -1.89
CTDSPL2-202ENST00000558373 NUBP1P53384 320 aa3.27□□□□□ -1.89
CTDSPL2-202ENST00000558373 POTEFA5A3E0 1075 aa3.26□□□□□ -1.89
CTDSPL2-202ENST00000558373 POTEMA6NI47 508 aa3.26□□□□□ -1.89
CTDSPL2-202ENST00000558373 GPR37O15354 613 aa3.26□□□□□ -1.89
CTDSPL2-202ENST00000558373 PRR29P0C7W0 189 aa3.26□□□□□ -1.89
CTDSPL2-202ENST00000558373 AMER1Q5JTC6 1135 aaPredicted RBP3.25□□□□□ -1.89
CTDSPL2-202ENST00000558373 PABPN1Q86U42 306 aaKnown RBP eCLIP3.25□□□□□ -1.89
CTDSPL2-202ENST00000558373 CLEC11AQ9Y240 323 aa3.25□□□□□ -1.89
CTDSPL2-202ENST00000558373 POTEGQ6S5H5 508 aa3.23□□□□□ -1.89
CTDSPL2-202ENST00000558373 ATMINO43313 823 aaPredicted RBP3.23□□□□□ -1.89
CTDSPL2-202ENST00000558373 ONECUT3O60422 494 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL2-202ENST00000558373 KIF3CO14782 793 aa3.2□□□□□ -1.9
CTDSPL2-202ENST00000558373 ZRANB1Q9UGI0 708 aa3.19□□□□□ -1.9
CTDSPL2-202ENST00000558373 FBXO22Q8NEZ5 403 aa3.19□□□□□ -1.9
CTDSPL2-202ENST00000558373 TMUB1Q9BVT8 246 aa3.18□□□□□ -1.9
CTDSPL2-202ENST00000558373 DCBLD2Q96PD2 775 aa3.18□□□□□ -1.9
CTDSPL2-202ENST00000558373 PHF12Q96QT6 1004 aa3.18□□□□□ -1.9
CTDSPL2-202ENST00000558373 TMEM121BQ9BXQ6 578 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL2-202ENST00000558373 C7P10643 843 aa3.17□□□□□ -1.9
CTDSPL2-202ENST00000558373 CCDC61Q9Y6R9 512 aa3.17□□□□□ -1.9
CTDSPL2-202ENST00000558373 SLC39A7Q92504 469 aa3.16□□□□□ -1.9
CTDSPL2-202ENST00000558373 CAMK2BQ13554 666 aa3.16□□□□□ -1.9
CTDSPL2-202ENST00000558373 METRNQ9UJH8 293 aa3.15□□□□□ -1.9
CTDSPL2-202ENST00000558373 MS4A3Q96HJ5 214 aa3.15□□□□□ -1.91
CTDSPL2-202ENST00000558373 ATN1P54259 1190 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL2-202ENST00000558373 FBXO3Q9UK99 471 aa3.15□□□□□ -1.91
CTDSPL2-202ENST00000558373 KIF12Q96FN5 646 aa3.13□□□□□ -1.91
CTDSPL2-202ENST00000558373 MFSD10Q14728 455 aa3.13□□□□□ -1.91
CTDSPL2-202ENST00000558373 BMP2KQ9NSY1 1161 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL2-202ENST00000558373 GTPBP6O43824 516 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL2-202ENST00000558373 STAG3Q9UJ98 1225 aa3.12□□□□□ -1.91
CTDSPL2-202ENST00000558373 TRPC6Q9Y210 931 aa3.12□□□□□ -1.91
CTDSPL2-202ENST00000558373 MAMSTRQ6ZN01 415 aa3.12□□□□□ -1.91
CTDSPL2-202ENST00000558373 GPR37L1O60883 481 aa3.11□□□□□ -1.91
CTDSPL2-202ENST00000558373 SLC24A1O60721 1099 aa3.11□□□□□ -1.91
CTDSPL2-202ENST00000558373 MS4A4AQ96JQ5 239 aa3.11□□□□□ -1.91
CTDSPL2-202ENST00000558373 COLQQ9Y215 455 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-202ENST00000558373 TIE1P35590 1138 aa3.09□□□□□ -1.91
CTDSPL2-202ENST00000558373 FKBP8Q14318 412 aa3.09□□□□□ -1.91
CTDSPL2-202ENST00000558373 IER5LQ5T953 404 aa3.08□□□□□ -1.92
CTDSPL2-202ENST00000558373 FBXO31Q5XUX0 539 aaPredicted RBP3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 CDAN1Q8IWY9 1227 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 SPNS2Q8IVW8 549 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 ST18O60284 1047 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 MMRN1Q13201 1228 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 CADPS2Q86UW7 1296 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 TTLL13PA6NNM8 815 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 IRX5P78411 483 aaPredicted RBP3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 OXER1Q8TDS5 423 aa3.07□□□□□ -1.92
CTDSPL2-202ENST00000558373 SPDYE4A6NLX3 237 aa3.05□□□□□ -1.92
CTDSPL2-202ENST00000558373 POTEB3A0JP26 581 aa3.05□□□□□ -1.92
CTDSPL2-202ENST00000558373 PLCB2Q00722 1185 aa3.05□□□□□ -1.92
CTDSPL2-202ENST00000558373 POTEBQ6S5H4 581 aa3.05□□□□□ -1.92
CTDSPL2-202ENST00000558373 NCKAP5LQ9HCH0 1330 aa3.05□□□□□ -1.92
CTDSPL2-202ENST00000558373 HS6ST3Q8IZP7 471 aa3.04□□□□□ -1.92
CTDSPL2-202ENST00000558373 MAP3K13O43283 966 aa3.04□□□□□ -1.92
CTDSPL2-202ENST00000558373 RASEFQ8IZ41 740 aa3.03□□□□□ -1.92
CTDSPL2-202ENST00000558373 FAM163AQ96GL9 167 aaPredicted RBP3.03□□□□□ -1.92
CTDSPL2-202ENST00000558373 KRTAP3-3Q9BYR6 98 aa3.03□□□□□ -1.92
CTDSPL2-202ENST00000558373 KRTAP3-2Q9BYR7 98 aa3.03□□□□□ -1.92
CTDSPL2-202ENST00000558373 SCUBE2Q9NQ36 999 aa3.03□□□□□ -1.92
CTDSPL2-202ENST00000558373 PAK3O75914 559 aaPredicted RBP3.02□□□□□ -1.93
CTDSPL2-202ENST00000558373 RGL2O15211 777 aa3.01□□□□□ -1.93
CTDSPL2-202ENST00000558373 PRIM1P49642 420 aaKnown RBP3.01□□□□□ -1.93
CTDSPL2-202ENST00000558373 PLEKHG5O94827 1062 aa3□□□□□ -1.93
CTDSPL2-202ENST00000558373 TTC13Q8NBP0 860 aa2.99□□□□□ -1.93
CTDSPL2-202ENST00000558373 VASPP50552 380 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL2-202ENST00000558373 PDCD7Q8N8D1 485 aaKnown RBP2.99□□□□□ -1.93
CTDSPL2-202ENST00000558373 IFNL1Q8IU54 200 aa2.99□□□□□ -1.93
CTDSPL2-202ENST00000558373 SRPK2P78362 688 aaKnown RBP2.98□□□□□ -1.93
CTDSPL2-202ENST00000558373 IGSF5Q9NSI5 407 aa2.98□□□□□ -1.93
CTDSPL2-202ENST00000558373 ZBTB47Q9UFB7 747 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL2-202ENST00000558373 TAOK2Q9UL54 1235 aa2.98□□□□□ -1.93
CTDSPL2-202ENST00000558373 TRIM35Q9UPQ4 493 aa2.98□□□□□ -1.93
CTDSPL2-202ENST00000558373 MFRPQ9BY79 579 aa2.97□□□□□ -1.93
CTDSPL2-202ENST00000558373 CRISPLD2Q9H0B8 497 aa2.97□□□□□ -1.93
CTDSPL2-202ENST00000558373 TRIM41Q8WV44 630 aa2.97□□□□□ -1.93
CTDSPL2-202ENST00000558373 SOCS7O14512 581 aa2.96□□□□□ -1.94
CTDSPL2-202ENST00000558373 TSPYL2Q9H2G4 693 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL2-202ENST00000558373 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL2-202ENST00000558373 HOXB3P14651 431 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL2-202ENST00000558373 PTGER2P43116 358 aa2.95□□□□□ -1.94
CTDSPL2-202ENST00000558373 SLAIN1Q8ND83 568 aa2.95□□□□□ -1.94
CTDSPL2-202ENST00000558373 FNBP4Q8N3X1 1017 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL2-202ENST00000558373 OCEL1Q9H607 264 aa2.94□□□□□ -1.94
CTDSPL2-202ENST00000558373 SPOCK2Q92563 424 aa2.93□□□□□ -1.94
CTDSPL2-202ENST00000558373 PRKDCP78527 4128 aaKnown RBP2.93□□□□□ -1.94
CTDSPL2-202ENST00000558373 ZMYND10O75800 440 aa2.93□□□□□ -1.94
CTDSPL2-202ENST00000558373 VSIG10Q8N0Z9 540 aa2.92□□□□□ -1.94
CTDSPL2-202ENST00000558373 BBXQ8WY36 941 aaPredicted RBP2.91□□□□□ -1.94
CTDSPL2-202ENST00000558373 HS3ST6Q96QI5 342 aa2.91□□□□□ -1.94
CTDSPL2-202ENST00000558373 PCDHB13Q9Y5F0 798 aa2.91□□□□□ -1.94
CTDSPL2-202ENST00000558373 KLHL34Q8N239 644 aa2.91□□□□□ -1.94
CTDSPL2-202ENST00000558373 TMEM106CQ9BVX2 250 aa2.9□□□□□ -1.94
CTDSPL2-202ENST00000558373 TMEM92Q6UXU6 159 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms