RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
ZEB1-210ENST00000557827 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
ZEB1-210ENST00000557827 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
ZEB1-210ENST00000557827 TMEM132AQ24JP5 1023 aa13.56□□□□□ -0.24
ZEB1-210ENST00000557827 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
ZEB1-210ENST00000557827 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
ZEB1-210ENST00000557827 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
ZEB1-210ENST00000557827 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
ZEB1-210ENST00000557827 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
ZEB1-210ENST00000557827 GSE1Q14687 1217 aa13.45□□□□□ -0.26
ZEB1-210ENST00000557827 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
ZEB1-210ENST00000557827 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
ZEB1-210ENST00000557827 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
ZEB1-210ENST00000557827 STK25O00506 426 aa13.34□□□□□ -0.27
ZEB1-210ENST00000557827 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
ZEB1-210ENST00000557827 NUBP1P53384 320 aa13.33□□□□□ -0.28
ZEB1-210ENST00000557827 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
ZEB1-210ENST00000557827 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
ZEB1-210ENST00000557827 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
ZEB1-210ENST00000557827 RYDENQ9NUL5 291 aaKnown RBP13.25□□□□□ -0.29
ZEB1-210ENST00000557827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
ZEB1-210ENST00000557827 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
ZEB1-210ENST00000557827 LMOD2Q6P5Q4 547 aa13.2□□□□□ -0.3
ZEB1-210ENST00000557827 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
ZEB1-210ENST00000557827 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
ZEB1-210ENST00000557827 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-210ENST00000557827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
ZEB1-210ENST00000557827 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
ZEB1-210ENST00000557827 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
ZEB1-210ENST00000557827 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
ZEB1-210ENST00000557827 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
ZEB1-210ENST00000557827 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
ZEB1-210ENST00000557827 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
ZEB1-210ENST00000557827 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
ZEB1-210ENST00000557827 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
ZEB1-210ENST00000557827 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
ZEB1-210ENST00000557827 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
ZEB1-210ENST00000557827 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
ZEB1-210ENST00000557827 ZC3H15Q8WU90 426 aaKnown RBP13□□□□□ -0.33
ZEB1-210ENST00000557827 CREBZFQ9NS37 354 aa13□□□□□ -0.33
ZEB1-210ENST00000557827 PYGBP11216 843 aa12.99□□□□□ -0.33
ZEB1-210ENST00000557827 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
ZEB1-210ENST00000557827 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
ZEB1-210ENST00000557827 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
ZEB1-210ENST00000557827 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
ZEB1-210ENST00000557827 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
ZEB1-210ENST00000557827 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
ZEB1-210ENST00000557827 POTEHQ6S545 545 aa12.86□□□□□ -0.35
ZEB1-210ENST00000557827 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
ZEB1-210ENST00000557827 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
ZEB1-210ENST00000557827 SEMA3EO15041 775 aa12.83□□□□□ -0.36
ZEB1-210ENST00000557827 E2F4Q16254 413 aa12.82□□□□□ -0.36
ZEB1-210ENST00000557827 ZMYND10O75800 440 aa12.79□□□□□ -0.36
ZEB1-210ENST00000557827 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
ZEB1-210ENST00000557827 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
ZEB1-210ENST00000557827 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
ZEB1-210ENST00000557827 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
ZEB1-210ENST00000557827 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
ZEB1-210ENST00000557827 PPP1R37O75864 691 aa12.72□□□□□ -0.37
ZEB1-210ENST00000557827 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
ZEB1-210ENST00000557827 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
ZEB1-210ENST00000557827 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
ZEB1-210ENST00000557827 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
ZEB1-210ENST00000557827 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
ZEB1-210ENST00000557827 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
ZEB1-210ENST00000557827 PSEN1P49768 467 aa12.66□□□□□ -0.38
ZEB1-210ENST00000557827 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
ZEB1-210ENST00000557827 AK7Q96M32 723 aa12.62□□□□□ -0.39
ZEB1-210ENST00000557827 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
ZEB1-210ENST00000557827 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
ZEB1-210ENST00000557827 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
ZEB1-210ENST00000557827 NLRP6P59044 892 aa12.6□□□□□ -0.39
ZEB1-210ENST00000557827 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
ZEB1-210ENST00000557827 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
ZEB1-210ENST00000557827 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
ZEB1-210ENST00000557827 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
ZEB1-210ENST00000557827 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
ZEB1-210ENST00000557827 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
ZEB1-210ENST00000557827 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
ZEB1-210ENST00000557827 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
ZEB1-210ENST00000557827 SOX12O15370 315 aa12.55□□□□□ -0.4
ZEB1-210ENST00000557827 PDE4AP27815 886 aa12.55□□□□□ -0.4
ZEB1-210ENST00000557827 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
ZEB1-210ENST00000557827 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
ZEB1-210ENST00000557827 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
ZEB1-210ENST00000557827 MFSD10Q14728 455 aa12.53□□□□□ -0.4
ZEB1-210ENST00000557827 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
ZEB1-210ENST00000557827 KDM4CQ9H3R0 1056 aa12.53□□□□□ -0.4
ZEB1-210ENST00000557827 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
ZEB1-210ENST00000557827 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
ZEB1-210ENST00000557827 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
ZEB1-210ENST00000557827 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
ZEB1-210ENST00000557827 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
ZEB1-210ENST00000557827 TRIM66O15016 1216 aa12.46□□□□□ -0.41
ZEB1-210ENST00000557827 HRCP23327 699 aa12.46□□□□□ -0.41
ZEB1-210ENST00000557827 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
ZEB1-210ENST00000557827 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
ZEB1-210ENST00000557827 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
ZEB1-210ENST00000557827 PDE4DQ08499 809 aa12.45□□□□□ -0.42
ZEB1-210ENST00000557827 MLLT3P42568 568 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms