RNA–Protein interactions for RNA: ENST00000557508.5

PSMA3-213, Transcript of proteasome subunit alpha 3, humanhuman

TSL 5 BASIC

Gene PSMA3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-213ENST00000557508 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
PSMA3-213ENST00000557508 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
PSMA3-213ENST00000557508 MIER1Q8N108 512 aa12.88□□□□□ -0.35
PSMA3-213ENST00000557508 FKBP8Q14318 412 aa12.86□□□□□ -0.35
PSMA3-213ENST00000557508 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
PSMA3-213ENST00000557508 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
PSMA3-213ENST00000557508 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
PSMA3-213ENST00000557508 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
PSMA3-213ENST00000557508 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
PSMA3-213ENST00000557508 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
PSMA3-213ENST00000557508 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
PSMA3-213ENST00000557508 NUBP1P53384 320 aa12.73□□□□□ -0.37
PSMA3-213ENST00000557508 LCE2DQ5TA82 110 aaPredicted RBP12.73□□□□□ -0.37
PSMA3-213ENST00000557508 MAP3K13O43283 966 aa12.72□□□□□ -0.37
PSMA3-213ENST00000557508 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
PSMA3-213ENST00000557508 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
PSMA3-213ENST00000557508 ATN1P54259 1190 aaPredicted RBP12.69□□□□□ -0.38
PSMA3-213ENST00000557508 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
PSMA3-213ENST00000557508 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
PSMA3-213ENST00000557508 C7P10643 843 aa12.64□□□□□ -0.39
PSMA3-213ENST00000557508 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
PSMA3-213ENST00000557508 POTEFA5A3E0 1075 aa12.61□□□□□ -0.39
PSMA3-213ENST00000557508 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
PSMA3-213ENST00000557508 TIE1P35590 1138 aa12.58□□□□□ -0.4
PSMA3-213ENST00000557508 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
PSMA3-213ENST00000557508 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
PSMA3-213ENST00000557508 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
PSMA3-213ENST00000557508 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
PSMA3-213ENST00000557508 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
PSMA3-213ENST00000557508 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
PSMA3-213ENST00000557508 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
PSMA3-213ENST00000557508 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
PSMA3-213ENST00000557508 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
PSMA3-213ENST00000557508 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
PSMA3-213ENST00000557508 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
PSMA3-213ENST00000557508 PYGBP11216 843 aa12.42□□□□□ -0.42
PSMA3-213ENST00000557508 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
PSMA3-213ENST00000557508 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
PSMA3-213ENST00000557508 IER5LQ5T953 404 aa12.38□□□□□ -0.43
PSMA3-213ENST00000557508 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
PSMA3-213ENST00000557508 SEC24BO95487 1268 aa12.34□□□□□ -0.43
PSMA3-213ENST00000557508 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
PSMA3-213ENST00000557508 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
PSMA3-213ENST00000557508 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
PSMA3-213ENST00000557508 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
PSMA3-213ENST00000557508 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
PSMA3-213ENST00000557508 GSE1Q14687 1217 aa12.26□□□□□ -0.45
PSMA3-213ENST00000557508 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
PSMA3-213ENST00000557508 PLCG2P16885 1265 aa12.2□□□□□ -0.46
PSMA3-213ENST00000557508 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
PSMA3-213ENST00000557508 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
PSMA3-213ENST00000557508 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
PSMA3-213ENST00000557508 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
PSMA3-213ENST00000557508 SLAIN1Q8ND83 568 aa12.14□□□□□ -0.47
PSMA3-213ENST00000557508 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
PSMA3-213ENST00000557508 PSEN1P49768 467 aa12.12□□□□□ -0.47
PSMA3-213ENST00000557508 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
PSMA3-213ENST00000557508 ST18O60284 1047 aa12.08□□□□□ -0.48
PSMA3-213ENST00000557508 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
PSMA3-213ENST00000557508 SPNS2Q8IVW8 549 aa12.07□□□□□ -0.48
PSMA3-213ENST00000557508 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
PSMA3-213ENST00000557508 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
PSMA3-213ENST00000557508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■□□ 16.3
PSMA3-213ENST00000557508 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
PSMA3-213ENST00000557508 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
PSMA3-213ENST00000557508 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
PSMA3-213ENST00000557508 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
PSMA3-213ENST00000557508 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
PSMA3-213ENST00000557508 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
PSMA3-213ENST00000557508 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
PSMA3-213ENST00000557508 C3orf67Q6ZVT6 689 aa11.88□□□□□ -0.51
PSMA3-213ENST00000557508 SNPHO15079 494 aa11.86□□□□□ -0.51
PSMA3-213ENST00000557508 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
PSMA3-213ENST00000557508 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
PSMA3-213ENST00000557508 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
PSMA3-213ENST00000557508 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
PSMA3-213ENST00000557508 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
PSMA3-213ENST00000557508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
PSMA3-213ENST00000557508 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
PSMA3-213ENST00000557508 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
PSMA3-213ENST00000557508 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
PSMA3-213ENST00000557508 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
PSMA3-213ENST00000557508 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
PSMA3-213ENST00000557508 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
PSMA3-213ENST00000557508 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
PSMA3-213ENST00000557508 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
PSMA3-213ENST00000557508 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
PSMA3-213ENST00000557508 SOX12O15370 315 aa11.7□□□□□ -0.54
PSMA3-213ENST00000557508 PHF8Q9UPP1 1060 aa11.7□□□□□ -0.54
PSMA3-213ENST00000557508 G3V3G9 751 aa11.69□□□□□ -0.54
PSMA3-213ENST00000557508 EMP3P54852 163 aa11.69□□□□□ -0.54
PSMA3-213ENST00000557508 MICALL2Q8IY33 904 aa11.69□□□□□ -0.54
PSMA3-213ENST00000557508 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
PSMA3-213ENST00000557508 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
PSMA3-213ENST00000557508 FBXO22Q8NEZ5 403 aa11.63□□□□□ -0.55
PSMA3-213ENST00000557508 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
PSMA3-213ENST00000557508 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
PSMA3-213ENST00000557508 PKD2Q13563 968 aa11.61□□□□□ -0.55
PSMA3-213ENST00000557508 MFRPQ9BY79 579 aa11.58□□□□□ -0.56
PSMA3-213ENST00000557508 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms