RNA–Protein interactions for RNA: ENST00000556925.5

NEMF-213, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 3,699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-213ENST00000556925 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
NEMF-213ENST00000556925 FOXD1Q16676 465 aa12.57□□□□□ -0.4
NEMF-213ENST00000556925 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEMF-213ENST00000556925 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
NEMF-213ENST00000556925 SECISBP2LQ93073 1101 aaKnown RBP12.54□□□□□ -0.4
NEMF-213ENST00000556925 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
NEMF-213ENST00000556925 RRP9O43818 475 aaKnown RBP12.53□□□□□ -0.4
NEMF-213ENST00000556925 HSP90AA2PQ14568 343 aaPredicted RBP12.53□□□□□ -0.4
NEMF-213ENST00000556925 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
NEMF-213ENST00000556925 WASHC2CQ9Y4E1 1318 aa12.53□□□□□ -0.4
NEMF-213ENST00000556925 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
NEMF-213ENST00000556925 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
NEMF-213ENST00000556925 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
NEMF-213ENST00000556925 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
NEMF-213ENST00000556925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
NEMF-213ENST00000556925 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
NEMF-213ENST00000556925 FKBP8Q14318 412 aa12.48□□□□□ -0.41
NEMF-213ENST00000556925 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
NEMF-213ENST00000556925 RGS3P49796 1198 aa12.48□□□□□ -0.41
NEMF-213ENST00000556925 CDK11BP21127 795 aaKnown RBP12.48□□□□□ -0.41
NEMF-213ENST00000556925 RTL5Q5HYW3 569 aaPredicted RBP12.48□□□□□ -0.41
NEMF-213ENST00000556925 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
NEMF-213ENST00000556925 HSP90B1P14625 803 aaKnown RBP12.47□□□□□ -0.41
NEMF-213ENST00000556925 ITGAEP38570 1179 aa12.47□□□□□ -0.41
NEMF-213ENST00000556925 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
NEMF-213ENST00000556925 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.41
NEMF-213ENST00000556925 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
NEMF-213ENST00000556925 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
NEMF-213ENST00000556925 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
NEMF-213ENST00000556925 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
NEMF-213ENST00000556925 FAM43AQ8N2R8 423 aa12.41□□□□□ -0.42
NEMF-213ENST00000556925 KCNA4P22459 653 aa12.4□□□□□ -0.42
NEMF-213ENST00000556925 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
NEMF-213ENST00000556925 ZNF830Q96NB3 372 aaPredicted RBP12.36□□□□□ -0.43
NEMF-213ENST00000556925 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
NEMF-213ENST00000556925 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
NEMF-213ENST00000556925 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
NEMF-213ENST00000556925 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
NEMF-213ENST00000556925 HSP90AA1P07900 732 aaKnown RBP12.32□□□□□ -0.44
NEMF-213ENST00000556925 PRDM10Q9NQV6 1147 aa12.32□□□□□ -0.44
NEMF-213ENST00000556925 IGSF3O75054 1194 aa12.31□□□□□ -0.44
NEMF-213ENST00000556925 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
NEMF-213ENST00000556925 NCLP19338 710 aaKnown RBP12.28□□□□□ -0.44
NEMF-213ENST00000556925 TMEM51Q9NW97 253 aa12.27□□□□□ -0.44
NEMF-213ENST00000556925 NEFMP07197 916 aa12.27□□□□□ -0.45
NEMF-213ENST00000556925 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
NEMF-213ENST00000556925 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
NEMF-213ENST00000556925 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
NEMF-213ENST00000556925 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
NEMF-213ENST00000556925 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
NEMF-213ENST00000556925 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
NEMF-213ENST00000556925 TMED8Q6PL24 325 aaPredicted RBP12.21□□□□□ -0.45
NEMF-213ENST00000556925 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.46
NEMF-213ENST00000556925 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
NEMF-213ENST00000556925 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
NEMF-213ENST00000556925 VGLL3A8MV65 326 aa12.19□□□□□ -0.46
NEMF-213ENST00000556925 UBTFP17480 764 aaKnown RBP12.19□□□□□ -0.46
NEMF-213ENST00000556925 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
NEMF-213ENST00000556925 GSE1Q14687 1217 aa12.18□□□□□ -0.46
NEMF-213ENST00000556925 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
NEMF-213ENST00000556925 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
NEMF-213ENST00000556925 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
NEMF-213ENST00000556925 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.17□□□□□ -0.46
NEMF-213ENST00000556925 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
NEMF-213ENST00000556925 FAM43BQ6ZT52 329 aaPredicted RBP12.15□□□□□ -0.46
NEMF-213ENST00000556925 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
NEMF-213ENST00000556925 SLC52A1Q9NWF4 448 aa12.13□□□□□ -0.47
NEMF-213ENST00000556925 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
NEMF-213ENST00000556925 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
NEMF-213ENST00000556925 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
NEMF-213ENST00000556925 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
NEMF-213ENST00000556925 MMP14P50281 582 aa12.09□□□□□ -0.47
NEMF-213ENST00000556925 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
NEMF-213ENST00000556925 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
NEMF-213ENST00000556925 FAM193AP78312 1265 aa12.07□□□□□ -0.48
NEMF-213ENST00000556925 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
NEMF-213ENST00000556925 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
NEMF-213ENST00000556925 SMAP1Q8IYB5 467 aaPredicted RBP12.05□□□□□ -0.48
NEMF-213ENST00000556925 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
NEMF-213ENST00000556925 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
NEMF-213ENST00000556925 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.48
NEMF-213ENST00000556925 KCNH8Q96L42 1107 aa12.02□□□□□ -0.48
NEMF-213ENST00000556925 PNNQ9H307 717 aaKnown RBP12.02□□□□□ -0.49
NEMF-213ENST00000556925 HDAC5Q9UQL6 1122 aa12.02□□□□□ -0.49
NEMF-213ENST00000556925 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
NEMF-213ENST00000556925 PSEN1P49768 467 aa12.01□□□□□ -0.49
NEMF-213ENST00000556925 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
NEMF-213ENST00000556925 CLGNO14967 610 aa12.01□□□□□ -0.49
NEMF-213ENST00000556925 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
NEMF-213ENST00000556925 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
NEMF-213ENST00000556925 UTP14CQ5TAP6 766 aaKnown RBP11.98□□□□□ -0.49
NEMF-213ENST00000556925 CLCN1P35523 988 aa11.98□□□□□ -0.49
NEMF-213ENST00000556925 SOX12O15370 315 aa11.96□□□□□ -0.49
NEMF-213ENST00000556925 CLSTN1O94985 981 aa11.96□□□□□ -0.49
NEMF-213ENST00000556925 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.49
NEMF-213ENST00000556925 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.5
NEMF-213ENST00000556925 DMTNQ08495 405 aa11.94□□□□□ -0.5
NEMF-213ENST00000556925 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.56e-7■■■■□ 20.3
NEMF-213ENST00000556925 E9PSI1 815 aa11.93□□□□□ -0.5
NEMF-213ENST00000556925 MCCP23508 829 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms