RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 DCAF8L2P0C7V8 631 aa8.61□□□□□ -1.03
SRP54-209ENST00000555746 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
SRP54-209ENST00000555746 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
SRP54-209ENST00000555746 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
SRP54-209ENST00000555746 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
SRP54-209ENST00000555746 BBXQ8WY36 941 aaPredicted RBP8.52□□□□□ -1.05
SRP54-209ENST00000555746 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
SRP54-209ENST00000555746 TSPYL2Q9H2G4 693 aaPredicted RBP8.5□□□□□ -1.05
SRP54-209ENST00000555746 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
SRP54-209ENST00000555746 PYGBP11216 843 aa8.48□□□□□ -1.05
SRP54-209ENST00000555746 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
SRP54-209ENST00000555746 SGIP1Q9BQI5 828 aa8.48□□□□□ -1.05
SRP54-209ENST00000555746 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
SRP54-209ENST00000555746 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
SRP54-209ENST00000555746 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
SRP54-209ENST00000555746 VGFO15240 615 aaPredicted RBP8.46□□□□□ -1.06
SRP54-209ENST00000555746 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
SRP54-209ENST00000555746 PAK3O75914 559 aaPredicted RBP8.45□□□□□ -1.06
SRP54-209ENST00000555746 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
SRP54-209ENST00000555746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
SRP54-209ENST00000555746 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
SRP54-209ENST00000555746 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
SRP54-209ENST00000555746 ZFP91Q96JP5 570 aaPredicted RBP8.39□□□□□ -1.07
SRP54-209ENST00000555746 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
SRP54-209ENST00000555746 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
SRP54-209ENST00000555746 STK25O00506 426 aa8.37□□□□□ -1.07
SRP54-209ENST00000555746 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
SRP54-209ENST00000555746 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
SRP54-209ENST00000555746 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
SRP54-209ENST00000555746 PDAP1Q13442 181 aaKnown RBP8.36□□□□□ -1.07
SRP54-209ENST00000555746 MAP3K13O43283 966 aa8.35□□□□□ -1.07
SRP54-209ENST00000555746 HAP1P54257 671 aaPredicted RBP8.35□□□□□ -1.07
SRP54-209ENST00000555746 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
SRP54-209ENST00000555746 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
SRP54-209ENST00000555746 PCDHB13Q9Y5F0 798 aa8.35□□□□□ -1.07
SRP54-209ENST00000555746 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
SRP54-209ENST00000555746 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
SRP54-209ENST00000555746 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
SRP54-209ENST00000555746 IFNL1Q8IU54 200 aa8.32□□□□□ -1.08
SRP54-209ENST00000555746 PSEN1P49768 467 aa8.31□□□□□ -1.08
SRP54-209ENST00000555746 PHF12Q96QT6 1004 aa8.3□□□□□ -1.08
SRP54-209ENST00000555746 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
SRP54-209ENST00000555746 VSIG10Q8N0Z9 540 aa8.29□□□□□ -1.08
SRP54-209ENST00000555746 RYDENQ9NUL5 291 aaKnown RBP8.27□□□□□ -1.09
SRP54-209ENST00000555746 CLCN6P51797 869 aa8.23□□□□□ -1.09
SRP54-209ENST00000555746 MS4A3Q96HJ5 214 aa8.23□□□□□ -1.09
SRP54-209ENST00000555746 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
SRP54-209ENST00000555746 HAX1O00165 279 aa8.22□□□□□ -1.09
SRP54-209ENST00000555746 EVX2Q03828 476 aa8.2□□□□□ -1.1
SRP54-209ENST00000555746 KDM2AQ9Y2K7 1162 aa8.2□□□□□ -1.1
SRP54-209ENST00000555746 TIE1P35590 1138 aa8.19□□□□□ -1.1
SRP54-209ENST00000555746 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
SRP54-209ENST00000555746 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
SRP54-209ENST00000555746 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
SRP54-209ENST00000555746 SOX12O15370 315 aa8.18□□□□□ -1.1
SRP54-209ENST00000555746 EFCAB3Q8N7B9 438 aa8.18□□□□□ -1.1
SRP54-209ENST00000555746 TMEM106CQ9BVX2 250 aa8.16□□□□□ -1.1
SRP54-209ENST00000555746 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
SRP54-209ENST00000555746 NLRP6P59044 892 aa8.15□□□□□ -1.1
SRP54-209ENST00000555746 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
SRP54-209ENST00000555746 TTLL13PA6NNM8 815 aa8.13□□□□□ -1.11
SRP54-209ENST00000555746 BMP2KQ9NSY1 1161 aaPredicted RBP8.13□□□□□ -1.11
SRP54-209ENST00000555746 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
SRP54-209ENST00000555746 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
SRP54-209ENST00000555746 ILDR1Q86SU0 546 aaPredicted RBP8.09□□□□□ -1.11
SRP54-209ENST00000555746 PPP1R37O75864 691 aa8.08□□□□□ -1.12
SRP54-209ENST00000555746 MKRN3Q13064 507 aaKnown RBP8.08□□□□□ -1.12
SRP54-209ENST00000555746 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
SRP54-209ENST00000555746 TRIM35Q9UPQ4 493 aa8.07□□□□□ -1.12
SRP54-209ENST00000555746 GABBR2O75899 941 aa8.06□□□□□ -1.12
SRP54-209ENST00000555746 ASTLQ6HA08 431 aaPredicted RBP8.06□□□□□ -1.12
SRP54-209ENST00000555746 ATMINO43313 823 aaPredicted RBP8.05□□□□□ -1.12
SRP54-209ENST00000555746 CADPS2Q86UW7 1296 aa8.05□□□□□ -1.12
SRP54-209ENST00000555746 ATN1P54259 1190 aaPredicted RBP8.04□□□□□ -1.12
SRP54-209ENST00000555746 BCANQ96GW7 911 aa8.04□□□□□ -1.12
SRP54-209ENST00000555746 IER5LQ5T953 404 aa8.02□□□□□ -1.13
SRP54-209ENST00000555746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.02□□□□□ -1.133e-8■□□□□ 8.4
SRP54-209ENST00000555746 IRX5P78411 483 aaPredicted RBP7.99□□□□□ -1.13
SRP54-209ENST00000555746 PDCD7Q8N8D1 485 aaKnown RBP7.98□□□□□ -1.13
SRP54-209ENST00000555746 OCEL1Q9H607 264 aa7.96□□□□□ -1.14
SRP54-209ENST00000555746 SP7Q8TDD2 431 aaPredicted RBP7.95□□□□□ -1.14
SRP54-209ENST00000555746 DCBLD2Q96PD2 775 aa7.95□□□□□ -1.14
SRP54-209ENST00000555746 WDR70Q9NW82 654 aa7.95□□□□□ -1.14
SRP54-209ENST00000555746 P3H3Q8IVL6 736 aa7.94□□□□□ -1.14
SRP54-209ENST00000555746 PELP1Q8IZL8 1130 aaKnown RBP7.94□□□□□ -1.14
SRP54-209ENST00000555746 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
SRP54-209ENST00000555746 NCKAP5LQ9HCH0 1330 aa7.94□□□□□ -1.14
SRP54-209ENST00000555746 PDE4AP27815 886 aa7.93□□□□□ -1.14
SRP54-209ENST00000555746 MFSD10Q14728 455 aa7.93□□□□□ -1.14
SRP54-209ENST00000555746 DPY19L2Q6NUT2 758 aa7.93□□□□□ -1.14
SRP54-209ENST00000555746 POTEIP0CG38 1075 aa7.91□□□□□ -1.14
SRP54-209ENST00000555746 PLCG2P16885 1265 aa7.91□□□□□ -1.14
SRP54-209ENST00000555746 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
SRP54-209ENST00000555746 SLC39A7Q92504 469 aa7.91□□□□□ -1.14
SRP54-209ENST00000555746 TMEM121BQ9BXQ6 578 aaPredicted RBP7.91□□□□□ -1.14
SRP54-209ENST00000555746 NBR1Q14596 966 aa7.9□□□□□ -1.14
SRP54-209ENST00000555746 C7P10643 843 aa7.89□□□□□ -1.15
SRP54-209ENST00000555746 KCNV2Q8TDN2 545 aa7.89□□□□□ -1.15
SRP54-209ENST00000555746 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
SRP54-209ENST00000555746 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms