RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
KTN1-213ENST00000554306 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
KTN1-213ENST00000554306 NUBP1P53384 320 aa14.07□□□□□ -0.16
KTN1-213ENST00000554306 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
KTN1-213ENST00000554306 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
KTN1-213ENST00000554306 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
KTN1-213ENST00000554306 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
KTN1-213ENST00000554306 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
KTN1-213ENST00000554306 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
KTN1-213ENST00000554306 MAP3K13O43283 966 aa13.91□□□□□ -0.18
KTN1-213ENST00000554306 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
KTN1-213ENST00000554306 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
KTN1-213ENST00000554306 GSE1Q14687 1217 aa13.86□□□□□ -0.19
KTN1-213ENST00000554306 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
KTN1-213ENST00000554306 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
KTN1-213ENST00000554306 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
KTN1-213ENST00000554306 LHX8Q68G74 356 aa13.82□□□□□ -0.2
KTN1-213ENST00000554306 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
KTN1-213ENST00000554306 TIE1P35590 1138 aa13.79□□□□□ -0.2
KTN1-213ENST00000554306 PYGBP11216 843 aa13.78□□□□□ -0.2
KTN1-213ENST00000554306 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
KTN1-213ENST00000554306 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
KTN1-213ENST00000554306 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
KTN1-213ENST00000554306 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
KTN1-213ENST00000554306 SLC39A7Q92504 469 aa13.74□□□□□ -0.21
KTN1-213ENST00000554306 ATN1P54259 1190 aaPredicted RBP13.73□□□□□ -0.21
KTN1-213ENST00000554306 C7P10643 843 aa13.71□□□□□ -0.21
KTN1-213ENST00000554306 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
KTN1-213ENST00000554306 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
KTN1-213ENST00000554306 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
KTN1-213ENST00000554306 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
KTN1-213ENST00000554306 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
KTN1-213ENST00000554306 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
KTN1-213ENST00000554306 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
KTN1-213ENST00000554306 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
KTN1-213ENST00000554306 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
KTN1-213ENST00000554306 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
KTN1-213ENST00000554306 IER5LQ5T953 404 aa13.57□□□□□ -0.24
KTN1-213ENST00000554306 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
KTN1-213ENST00000554306 SEC24BO95487 1268 aa13.52□□□□□ -0.25
KTN1-213ENST00000554306 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
KTN1-213ENST00000554306 PSEN1P49768 467 aa13.48□□□□□ -0.25
KTN1-213ENST00000554306 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
KTN1-213ENST00000554306 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
KTN1-213ENST00000554306 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
KTN1-213ENST00000554306 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
KTN1-213ENST00000554306 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
KTN1-213ENST00000554306 PLCG2P16885 1265 aa13.42□□□□□ -0.26
KTN1-213ENST00000554306 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
KTN1-213ENST00000554306 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
KTN1-213ENST00000554306 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
KTN1-213ENST00000554306 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
KTN1-213ENST00000554306 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
KTN1-213ENST00000554306 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
KTN1-213ENST00000554306 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
KTN1-213ENST00000554306 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
KTN1-213ENST00000554306 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
KTN1-213ENST00000554306 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
KTN1-213ENST00000554306 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
KTN1-213ENST00000554306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.294e-12■■■■■ 39.2
KTN1-213ENST00000554306 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
KTN1-213ENST00000554306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
KTN1-213ENST00000554306 PKD2Q13563 968 aa13.22□□□□□ -0.29
KTN1-213ENST00000554306 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
KTN1-213ENST00000554306 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
KTN1-213ENST00000554306 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
KTN1-213ENST00000554306 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
KTN1-213ENST00000554306 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
KTN1-213ENST00000554306 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
KTN1-213ENST00000554306 SOX12O15370 315 aa13.12□□□□□ -0.31
KTN1-213ENST00000554306 G3V3G9 751 aa13.11□□□□□ -0.31
KTN1-213ENST00000554306 RGL2O15211 777 aa13.11□□□□□ -0.31
KTN1-213ENST00000554306 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
KTN1-213ENST00000554306 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
KTN1-213ENST00000554306 ABCC9O60706 1549 aa13.11□□□□□ -0.31
KTN1-213ENST00000554306 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
KTN1-213ENST00000554306 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
KTN1-213ENST00000554306 STK25O00506 426 aa13.07□□□□□ -0.32
KTN1-213ENST00000554306 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
KTN1-213ENST00000554306 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
KTN1-213ENST00000554306 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
KTN1-213ENST00000554306 SNPHO15079 494 aa13□□□□□ -0.33
KTN1-213ENST00000554306 NLRP6P59044 892 aa13□□□□□ -0.33
KTN1-213ENST00000554306 POTEMA6NI47 508 aa12.98□□□□□ -0.33
KTN1-213ENST00000554306 TMEM121BQ9BXQ6 578 aaPredicted RBP12.98□□□□□ -0.33
KTN1-213ENST00000554306 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
KTN1-213ENST00000554306 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
KTN1-213ENST00000554306 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
KTN1-213ENST00000554306 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
KTN1-213ENST00000554306 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
KTN1-213ENST00000554306 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
KTN1-213ENST00000554306 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
KTN1-213ENST00000554306 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
KTN1-213ENST00000554306 ST18O60284 1047 aa12.89□□□□□ -0.35
KTN1-213ENST00000554306 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
KTN1-213ENST00000554306 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
KTN1-213ENST00000554306 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
KTN1-213ENST00000554306 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
KTN1-213ENST00000554306 NACADO15069 1562 aa12.79□□□□□ -0.36
KTN1-213ENST00000554306 TMEM92Q6UXU6 159 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms