RNA–Protein interactions for RNA: ENST00000554259.5

RALGAPA1-206, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 3,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-206	ENST00000554259	CREBZF	Q9NS37	354 aa		4.35	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	IER5L	Q5T953	404 aa		4.35	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	PRR29	P0C7W0	189 aa		4.34	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	PRKAR2A	P13861	404 aa	Known RBP	4.34	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	LCE2D	Q5TA82	110 aa	Predicted RBP	4.34	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	SGIP1	Q9BQI5	828 aa		4.33	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	MNX1	P50219	401 aa	Predicted RBP	4.33	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	IFFO2	Q5TF58	517 aa		4.33	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	DNAJC5	Q9H3Z4	198 aa		4.33	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	SCRIB	Q14160	1630 aa		4.32	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	UNC13A	Q9UPW8	1703 aa		4.32	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	CC2D2A	Q9P2K1	1620 aa		4.32	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.31	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	SHROOM4	Q9ULL8	1493 aa		4.3	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	CLEC11A	Q9Y240	323 aa		4.3	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	FARP1	Q9Y4F1	1045 aa	Predicted RBP	4.3	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	EIF4G1	Q04637	1599 aa	Known RBP	4.29	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	DCAF1	Q9Y4B6	1507 aa		4.29	□□□□□ -1.72
RALGAPA1-206	ENST00000554259	SNPH	O15079	494 aa		4.25	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	NPM1	P06748	294 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	CHADL	Q6NUI6	762 aa		4.24	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	FBXO3	Q9UK99	471 aa		4.23	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	ERCC6	Q03468	1493 aa		4.23	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	MMRN1	Q13201	1228 aa		4.23	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	FKBP8	Q14318	412 aa		4.23	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	SCUBE2	Q9NQ36	999 aa		4.22	□□□□□ -1.73
RALGAPA1-206	ENST00000554259	CD44	P16070	742 aa	Known RBP	4.21	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	CDAN1	Q8IWY9	1227 aa		4.21	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.21	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	SPNS2	Q8IVW8	549 aa		4.2	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	NUBP1	P53384	320 aa		4.19	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	DCBLD2	Q96PD2	775 aa		4.19	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	TRIM41	Q8WV44	630 aa		4.18	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	CCDC61	Q9Y6R9	512 aa		4.17	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	NCAPD3	P42695	1498 aa		4.17	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	ATMIN	O43313	823 aa	Predicted RBP	4.17	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	PLEKHG5	O94827	1062 aa		4.17	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	CUX2	O14529	1486 aa		4.17	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	PAK3	O75914	559 aa	Predicted RBP	4.16	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	ZRANB1	Q9UGI0	708 aa		4.16	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	TIE1	P35590	1138 aa		4.15	□□□□□ -1.74
RALGAPA1-206	ENST00000554259	CHRM1	P11229	460 aa	Predicted RBP	4.15	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	ATAD2B	Q9ULI0	1458 aa		4.15	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	VASP	P50552	380 aa	Predicted RBP	4.14	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	KIF12	Q96FN5	646 aa		4.13	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	NES	P48681	1621 aa		4.13	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.12	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	MIER1	Q8N108	512 aa		4.12	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	SMARCA2	P51531	1590 aa		4.12	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	RASEF	Q8IZ41	740 aa		4.12	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	PDS5B	Q9NTI5	1447 aa		4.11	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	POTEB2	H3BUK9	544 aa		4.1	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	GSE1	Q14687	1217 aa		4.09	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	PLCD3	Q8N3E9	789 aa		4.09	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	PHF12	Q96QT6	1004 aa		4.09	□□□□□ -1.75
RALGAPA1-206	ENST00000554259	GALR2	O43603	387 aa	Predicted RBP	4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	CADPS	Q9ULU8	1353 aa		4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	HMGXB3	Q12766	1538 aa		4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	FAM212A	Q96EL1	285 aa		4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	SMARCA4	P51532	1647 aa		4.08	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	MS4A3	Q96HJ5	214 aa		4.07	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	POTEJ	P0CG39	1038 aa		4.06	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	SPOCK2	Q92563	424 aa		4.06	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	MROH2B	Q7Z745	1585 aa		4.05	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	LAMC3	Q9Y6N6	1575 aa		4.05	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	MAP3K13	O43283	966 aa		4.04	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	ILDR1	Q86SU0	546 aa	Predicted RBP	4.04	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	ZSWIM6	Q9HCJ5	1215 aa		4.04	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.03	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.03	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	MRC2	Q9UBG0	1479 aa		4.03	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	PELP1	Q8IZL8	1130 aa	Known RBP	4.03	□□□□□ -1.76
RALGAPA1-206	ENST00000554259	CYB5RL	Q6IPT4	315 aa		4.02	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	CEP164	Q9UPV0	1460 aa		4.02	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	FANCD2	Q9BXW9	1451 aa		4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	PEG3	Q9GZU2	1588 aa		4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	TTLL13P	A6NNM8	815 aa		4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	ATN1	P54259	1190 aa	Predicted RBP	4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	ZNF467	Q7Z7K2	595 aa	Predicted RBP	4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	METRN	Q9UJH8	293 aa		4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	THOC2	Q8NI27	1593 aa	Known RBP	4.01	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	IFNL1	Q8IU54	200 aa		4	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	PCDHB13	Q9Y5F0	798 aa		4	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	POTEF	A5A3E0	1075 aa		3.99	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	KIF21A	Q7Z4S6	1674 aa		3.99	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	DCAF8	Q5TAQ9	597 aa		3.99	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	TRPC6	Q9Y210	931 aa		3.99	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	IRX5	P78411	483 aa	Predicted RBP	3.98	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	CFTR	P13569	1480 aa		3.98	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	RSF1	Q96T23	1441 aa	Predicted RBP	3.98	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	WDR62	O43379	1518 aa		3.97	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	WIZ	O95785	1651 aa		3.97	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	KLHL34	Q8N239	644 aa		3.97	□□□□□ -1.77
RALGAPA1-206	ENST00000554259	CHMP7	Q8WUX9	453 aa	Predicted RBP	3.96	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	URB2	Q14146	1524 aa	Known RBP	3.95	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PYGB	P11216	843 aa		3.95	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PDAP1	Q13442	181 aa	Known RBP	3.95	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TMEM106C	Q9BVX2	250 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms