RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 METRNQ9UJH8 293 aa12□□□□□ -0.49
SEC23A-205ENST00000553925 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
SEC23A-205ENST00000553925 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
SEC23A-205ENST00000553925 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
SEC23A-205ENST00000553925 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
SEC23A-205ENST00000553925 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
SEC23A-205ENST00000553925 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
SEC23A-205ENST00000553925 C7P10643 843 aa11.93□□□□□ -0.5
SEC23A-205ENST00000553925 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
SEC23A-205ENST00000553925 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
SEC23A-205ENST00000553925 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
SEC23A-205ENST00000553925 MAP3K13O43283 966 aa11.88□□□□□ -0.51
SEC23A-205ENST00000553925 TRPC6Q9Y210 931 aa11.86□□□□□ -0.51
SEC23A-205ENST00000553925 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
SEC23A-205ENST00000553925 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
SEC23A-205ENST00000553925 POTEMA6NI47 508 aa11.82□□□□□ -0.52
SEC23A-205ENST00000553925 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
SEC23A-205ENST00000553925 FKBP8Q14318 412 aa11.81□□□□□ -0.52
SEC23A-205ENST00000553925 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
SEC23A-205ENST00000553925 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
SEC23A-205ENST00000553925 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
SEC23A-205ENST00000553925 SEC24BO95487 1268 aa11.78□□□□□ -0.52
SEC23A-205ENST00000553925 TIE1P35590 1138 aa11.78□□□□□ -0.52
SEC23A-205ENST00000553925 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
SEC23A-205ENST00000553925 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
SEC23A-205ENST00000553925 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
SEC23A-205ENST00000553925 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
SEC23A-205ENST00000553925 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
SEC23A-205ENST00000553925 NUBP1P53384 320 aa11.71□□□□□ -0.53
SEC23A-205ENST00000553925 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
SEC23A-205ENST00000553925 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
SEC23A-205ENST00000553925 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
SEC23A-205ENST00000553925 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
SEC23A-205ENST00000553925 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
SEC23A-205ENST00000553925 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
SEC23A-205ENST00000553925 IER5LQ5T953 404 aa11.6□□□□□ -0.55
SEC23A-205ENST00000553925 PYGBP11216 843 aa11.59□□□□□ -0.55
SEC23A-205ENST00000553925 PLCG2P16885 1265 aa11.58□□□□□ -0.56
SEC23A-205ENST00000553925 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
SEC23A-205ENST00000553925 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
SEC23A-205ENST00000553925 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
SEC23A-205ENST00000553925 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
SEC23A-205ENST00000553925 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
SEC23A-205ENST00000553925 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
SEC23A-205ENST00000553925 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SEC23A-205ENST00000553925 VASPP50552 380 aaPredicted RBP11.44□□□□□ -0.58
SEC23A-205ENST00000553925 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
SEC23A-205ENST00000553925 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SEC23A-205ENST00000553925 GSE1Q14687 1217 aa11.41□□□□□ -0.58
SEC23A-205ENST00000553925 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
SEC23A-205ENST00000553925 ST18O60284 1047 aa11.39□□□□□ -0.59
SEC23A-205ENST00000553925 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
SEC23A-205ENST00000553925 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
SEC23A-205ENST00000553925 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
SEC23A-205ENST00000553925 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
SEC23A-205ENST00000553925 PSEN1P49768 467 aa11.3□□□□□ -0.6
SEC23A-205ENST00000553925 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
SEC23A-205ENST00000553925 SNPHO15079 494 aa11.29□□□□□ -0.6
SEC23A-205ENST00000553925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.61e-9■□□□□ 10.8
SEC23A-205ENST00000553925 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
SEC23A-205ENST00000553925 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
SEC23A-205ENST00000553925 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
SEC23A-205ENST00000553925 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
SEC23A-205ENST00000553925 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
SEC23A-205ENST00000553925 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
SEC23A-205ENST00000553925 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
SEC23A-205ENST00000553925 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
SEC23A-205ENST00000553925 G3V3G9 751 aa11.19□□□□□ -0.62
SEC23A-205ENST00000553925 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
SEC23A-205ENST00000553925 EMP3P54852 163 aa11.16□□□□□ -0.62
SEC23A-205ENST00000553925 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
SEC23A-205ENST00000553925 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
SEC23A-205ENST00000553925 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
SEC23A-205ENST00000553925 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
SEC23A-205ENST00000553925 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
SEC23A-205ENST00000553925 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
SEC23A-205ENST00000553925 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
SEC23A-205ENST00000553925 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
SEC23A-205ENST00000553925 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
SEC23A-205ENST00000553925 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
SEC23A-205ENST00000553925 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
SEC23A-205ENST00000553925 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
SEC23A-205ENST00000553925 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
SEC23A-205ENST00000553925 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
SEC23A-205ENST00000553925 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
SEC23A-205ENST00000553925 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
SEC23A-205ENST00000553925 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
SEC23A-205ENST00000553925 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
SEC23A-205ENST00000553925 ERBB3P21860 1342 aa10.92□□□□□ -0.66
SEC23A-205ENST00000553925 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
SEC23A-205ENST00000553925 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
SEC23A-205ENST00000553925 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
SEC23A-205ENST00000553925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
SEC23A-205ENST00000553925 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
SEC23A-205ENST00000553925 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
SEC23A-205ENST00000553925 VGFO15240 615 aaPredicted RBP10.85□□□□□ -0.67
SEC23A-205ENST00000553925 PHF8Q9UPP1 1060 aa10.85□□□□□ -0.67
SEC23A-205ENST00000553925 SOX12O15370 315 aa10.84□□□□□ -0.67
SEC23A-205ENST00000553925 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
SEC23A-205ENST00000553925 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms