RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
LINC02407-202ENST00000553247 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
LINC02407-202ENST00000553247 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
LINC02407-202ENST00000553247 C7P10643 843 aa16.47■□□□□ 0.23
LINC02407-202ENST00000553247 SLC39A7Q92504 469 aa16.46■□□□□ 0.23
LINC02407-202ENST00000553247 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
LINC02407-202ENST00000553247 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
LINC02407-202ENST00000553247 ASTLQ6HA08 431 aaPredicted RBP16.37■□□□□ 0.21
LINC02407-202ENST00000553247 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
LINC02407-202ENST00000553247 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
LINC02407-202ENST00000553247 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
LINC02407-202ENST00000553247 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
LINC02407-202ENST00000553247 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
LINC02407-202ENST00000553247 SPNS2Q8IVW8 549 aa16.21■□□□□ 0.19
LINC02407-202ENST00000553247 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
LINC02407-202ENST00000553247 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
LINC02407-202ENST00000553247 MS4A3Q96HJ5 214 aa16.11■□□□□ 0.17
LINC02407-202ENST00000553247 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
LINC02407-202ENST00000553247 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
LINC02407-202ENST00000553247 POTEFA5A3E0 1075 aa16■□□□□ 0.15
LINC02407-202ENST00000553247 ST18O60284 1047 aa16■□□□□ 0.15
LINC02407-202ENST00000553247 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
LINC02407-202ENST00000553247 ZBTB22O15209 634 aa15.93■□□□□ 0.14
LINC02407-202ENST00000553247 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC02407-202ENST00000553247 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
LINC02407-202ENST00000553247 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
LINC02407-202ENST00000553247 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 SEC24BO95487 1268 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
LINC02407-202ENST00000553247 COLQQ9Y215 455 aaPredicted RBP15.74■□□□□ 0.11
LINC02407-202ENST00000553247 TMEM121BQ9BXQ6 578 aaPredicted RBP15.73■□□□□ 0.11
LINC02407-202ENST00000553247 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
LINC02407-202ENST00000553247 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
LINC02407-202ENST00000553247 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
LINC02407-202ENST00000553247 TIE1P35590 1138 aa15.61■□□□□ 0.09
LINC02407-202ENST00000553247 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
LINC02407-202ENST00000553247 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
LINC02407-202ENST00000553247 MARVELD3Q96A59 401 aa15.56■□□□□ 0.08
LINC02407-202ENST00000553247 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
LINC02407-202ENST00000553247 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
LINC02407-202ENST00000553247 IER5LQ5T953 404 aa15.51■□□□□ 0.07
LINC02407-202ENST00000553247 SNPHO15079 494 aa15.5■□□□□ 0.07
LINC02407-202ENST00000553247 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
LINC02407-202ENST00000553247 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
LINC02407-202ENST00000553247 KRTAP3-3Q9BYR6 98 aa15.43■□□□□ 0.06
LINC02407-202ENST00000553247 KRTAP3-2Q9BYR7 98 aa15.43■□□□□ 0.06
LINC02407-202ENST00000553247 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
LINC02407-202ENST00000553247 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
LINC02407-202ENST00000553247 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
LINC02407-202ENST00000553247 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
LINC02407-202ENST00000553247 MAP3K13O43283 966 aa15.38■□□□□ 0.05
LINC02407-202ENST00000553247 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
LINC02407-202ENST00000553247 EMP3P54852 163 aa15.33■□□□□ 0.04
LINC02407-202ENST00000553247 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
LINC02407-202ENST00000553247 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
LINC02407-202ENST00000553247 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
LINC02407-202ENST00000553247 PLCG2P16885 1265 aa15.27■□□□□ 0.04
LINC02407-202ENST00000553247 HS3ST6Q96QI5 342 aa15.27■□□□□ 0.04
LINC02407-202ENST00000553247 POTEB3A0JP26 581 aa15.24■□□□□ 0.03
LINC02407-202ENST00000553247 POTEBQ6S5H4 581 aa15.24■□□□□ 0.03
LINC02407-202ENST00000553247 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
LINC02407-202ENST00000553247 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
LINC02407-202ENST00000553247 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
LINC02407-202ENST00000553247 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
LINC02407-202ENST00000553247 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
LINC02407-202ENST00000553247 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
LINC02407-202ENST00000553247 SGIP1Q9BQI5 828 aa15.08■□□□□ 0
LINC02407-202ENST00000553247 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 NESP48681 1621 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 WIZO95785 1651 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 ERCC6Q03468 1493 aa15.03■□□□□ -0
LINC02407-202ENST00000553247 OCEL1Q9H607 264 aa15.02■□□□□ -0
LINC02407-202ENST00000553247 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
LINC02407-202ENST00000553247 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
LINC02407-202ENST00000553247 CUX2O14529 1486 aa15.01□□□□□ -0.01
LINC02407-202ENST00000553247 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
LINC02407-202ENST00000553247 TMEM106CQ9BVX2 250 aa14.99□□□□□ -0.01
LINC02407-202ENST00000553247 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
LINC02407-202ENST00000553247 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
LINC02407-202ENST00000553247 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
LINC02407-202ENST00000553247 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
LINC02407-202ENST00000553247 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
LINC02407-202ENST00000553247 CFTRP13569 1480 aa14.86□□□□□ -0.03
LINC02407-202ENST00000553247 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
LINC02407-202ENST00000553247 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
LINC02407-202ENST00000553247 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
LINC02407-202ENST00000553247 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
LINC02407-202ENST00000553247 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
LINC02407-202ENST00000553247 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
LINC02407-202ENST00000553247 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LINC02407-202ENST00000553247 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
LINC02407-202ENST00000553247 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
LINC02407-202ENST00000553247 WDR62O43379 1518 aa14.71□□□□□ -0.05
LINC02407-202ENST00000553247 ERBB3P21860 1342 aa14.71□□□□□ -0.05
LINC02407-202ENST00000553247 PTGER2P43116 358 aa14.69□□□□□ -0.06
LINC02407-202ENST00000553247 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
LINC02407-202ENST00000553247 HOXB1P14653 301 aaPredicted RBP14.64□□□□□ -0.07
LINC02407-202ENST00000553247 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
LINC02407-202ENST00000553247 PDCD7Q8N8D1 485 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms