RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ARXQ96QS3 562 aa8.2□□□□□ -1.1
PFDN5-219ENST00000553171 FAM69CQ0P6D2 419 aa8.19□□□□□ -1.1
PFDN5-219ENST00000553171 PEG3Q9GZU2 1588 aa8.17□□□□□ -1.1
PFDN5-219ENST00000553171 EIF4G3O43432 1585 aaKnown RBP8.16□□□□□ -1.1
PFDN5-219ENST00000553171 ABCC10Q5T3U5 1492 aa8.15□□□□□ -1.1
PFDN5-219ENST00000553171 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
PFDN5-219ENST00000553171 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
PFDN5-219ENST00000553171 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
PFDN5-219ENST00000553171 SYNJ1O43426 1573 aa8.11□□□□□ -1.11
PFDN5-219ENST00000553171 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
PFDN5-219ENST00000553171 AMER1Q5JTC6 1135 aaPredicted RBP8.09□□□□□ -1.11
PFDN5-219ENST00000553171 CFTRP13569 1480 aa8.07□□□□□ -1.12
PFDN5-219ENST00000553171 PPP4R3CPQ6ZMV5 832 aa8.07□□□□□ -1.12
PFDN5-219ENST00000553171 EIF5BO60841 1220 aaKnown RBP8.06□□□□□ -1.12
PFDN5-219ENST00000553171 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
PFDN5-219ENST00000553171 TOP2BQ02880 1626 aa8.04□□□□□ -1.12
PFDN5-219ENST00000553171 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
PFDN5-219ENST00000553171 CNKSR2Q8WXI2 1034 aa8.03□□□□□ -1.12
PFDN5-219ENST00000553171 MAPKBP1O60336 1514 aa7.99□□□□□ -1.13
PFDN5-219ENST00000553171 TARBP1Q13395 1621 aaKnown RBP7.99□□□□□ -1.13
PFDN5-219ENST00000553171 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
PFDN5-219ENST00000553171 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
PFDN5-219ENST00000553171 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
PFDN5-219ENST00000553171 TSPOAP1O95153 1857 aa7.97□□□□□ -1.13
PFDN5-219ENST00000553171 COL17A1Q9UMD9 1497 aaPredicted RBP7.96□□□□□ -1.13
PFDN5-219ENST00000553171 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
PFDN5-219ENST00000553171 PCF11O94913 1555 aaKnown RBP7.96□□□□□ -1.14
PFDN5-219ENST00000553171 MAGI1Q96QZ7 1491 aaPredicted RBP7.94□□□□□ -1.14
PFDN5-219ENST00000553171 DSG3P32926 999 aa7.94□□□□□ -1.14
PFDN5-219ENST00000553171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.144e-8■□□□□ 11.1
PFDN5-219ENST00000553171 TDRD9Q8NDG6 1382 aaKnown RBP7.93□□□□□ -1.14
PFDN5-219ENST00000553171 ABCC8Q09428 1581 aa7.93□□□□□ -1.14
PFDN5-219ENST00000553171 PTPRMP28827 1452 aa7.91□□□□□ -1.14
PFDN5-219ENST00000553171 CEP170Q5SW79 1584 aa7.9□□□□□ -1.14
PFDN5-219ENST00000553171 HOMEZQ8IX15 550 aa7.9□□□□□ -1.14
PFDN5-219ENST00000553171 HSPA2P54652 639 aa7.88□□□□□ -1.15
PFDN5-219ENST00000553171 BCL11AQ9H165 835 aa7.86□□□□□ -1.15
PFDN5-219ENST00000553171 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
PFDN5-219ENST00000553171 PPRC1Q5VV67 1664 aaKnown RBP7.86□□□□□ -1.15
PFDN5-219ENST00000553171 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
PFDN5-219ENST00000553171 SPINK5Q9NQ38 1064 aaPredicted RBP7.85□□□□□ -1.15
PFDN5-219ENST00000553171 GRIN2BQ13224 1484 aa7.85□□□□□ -1.15
PFDN5-219ENST00000553171 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
PFDN5-219ENST00000553171 POLA1P09884 1462 aaPredicted RBP7.84□□□□□ -1.15
PFDN5-219ENST00000553171 DNMBPQ6XZF7 1577 aa7.84□□□□□ -1.15
PFDN5-219ENST00000553171 WDR97A6NE52 1622 aa7.83□□□□□ -1.16
PFDN5-219ENST00000553171 RAD54L2Q9Y4B4 1467 aa7.82□□□□□ -1.16
PFDN5-219ENST00000553171 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
PFDN5-219ENST00000553171 IQSEC2Q5JU85 1478 aa7.81□□□□□ -1.16
PFDN5-219ENST00000553171 SOGA1O94964 1423 aa7.81□□□□□ -1.16
PFDN5-219ENST00000553171 CAPN15O75808 1086 aa7.8□□□□□ -1.16
PFDN5-219ENST00000553171 ADAMTSL3P82987 1691 aa7.79□□□□□ -1.16
PFDN5-219ENST00000553171 GLI2P10070 1586 aa7.79□□□□□ -1.16
PFDN5-219ENST00000553171 NUP160Q12769 1436 aa7.78□□□□□ -1.16
PFDN5-219ENST00000553171 ADCY10Q96PN6 1610 aa7.78□□□□□ -1.16
PFDN5-219ENST00000553171 U3KPZ7 1027 aaPredicted RBP7.77□□□□□ -1.17
PFDN5-219ENST00000553171 PRDM2Q13029 1718 aa7.77□□□□□ -1.17
PFDN5-219ENST00000553171 PRG4Q92954 1404 aaPredicted RBP7.77□□□□□ -1.17
PFDN5-219ENST00000553171 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
PFDN5-219ENST00000553171 SRCAPQ6ZRS2 3230 aa7.76□□□□□ -1.17
PFDN5-219ENST00000553171 TEX14Q8IWB6 1497 aa7.75□□□□□ -1.17
PFDN5-219ENST00000553171 YEATS2Q9ULM3 1422 aa7.74□□□□□ -1.17
PFDN5-219ENST00000553171 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
PFDN5-219ENST00000553171 JPH4Q96JJ6 628 aa7.73□□□□□ -1.17
PFDN5-219ENST00000553171 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
PFDN5-219ENST00000553171 KIF21BO75037 1637 aa7.72□□□□□ -1.17
PFDN5-219ENST00000553171 LTBP4Q8N2S1 1624 aa7.72□□□□□ -1.17
PFDN5-219ENST00000553171 PTPRTO14522 1441 aa7.71□□□□□ -1.17
PFDN5-219ENST00000553171 PLB1Q6P1J6 1458 aa7.71□□□□□ -1.18
PFDN5-219ENST00000553171 UBAP1LF5GYI3 381 aa7.71□□□□□ -1.18
PFDN5-219ENST00000553171 KCNA4P22459 653 aa7.71□□□□□ -1.18
PFDN5-219ENST00000553171 HSPA1LP34931 641 aa7.71□□□□□ -1.18
PFDN5-219ENST00000553171 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
PFDN5-219ENST00000553171 SP7Q8TDD2 431 aaPredicted RBP7.7□□□□□ -1.18
PFDN5-219ENST00000553171 RGS17Q9UGC6 210 aaPredicted RBP7.7□□□□□ -1.18
PFDN5-219ENST00000553171 WIZO95785 1651 aa7.69□□□□□ -1.18
PFDN5-219ENST00000553171 ASXL2Q76L83 1435 aa7.69□□□□□ -1.18
PFDN5-219ENST00000553171 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
PFDN5-219ENST00000553171 KIAA0586Q9BVV6 1533 aa7.67□□□□□ -1.18
PFDN5-219ENST00000553171 MAP3K4Q9Y6R4 1608 aa7.67□□□□□ -1.18
PFDN5-219ENST00000553171 BCANQ96GW7 911 aa7.66□□□□□ -1.18
PFDN5-219ENST00000553171 MADDQ8WXG6 1647 aa7.66□□□□□ -1.18
PFDN5-219ENST00000553171 STRCQ7RTU9 1775 aa7.66□□□□□ -1.18
PFDN5-219ENST00000553171 CHRDL2Q6WN34 429 aa7.65□□□□□ -1.18
PFDN5-219ENST00000553171 BCORL1Q5H9F3 1711 aa7.64□□□□□ -1.19
PFDN5-219ENST00000553171 PBRM1Q86U86 1689 aa7.63□□□□□ -1.19
PFDN5-219ENST00000553171 EPRSP07814 1512 aaKnown RBP7.63□□□□□ -1.19
PFDN5-219ENST00000553171 FAM9AQ8IZU1 332 aaPredicted RBP7.63□□□□□ -1.19
PFDN5-219ENST00000553171 FGD5Q6ZNL6 1462 aa7.62□□□□□ -1.19
PFDN5-219ENST00000553171 ABCB7O75027 752 aa7.61□□□□□ -1.19
PFDN5-219ENST00000553171 PLEKHG5O94827 1062 aa7.61□□□□□ -1.19
PFDN5-219ENST00000553171 UPF1Q92900 1129 aaKnown RBP eCLIP7.61□□□□□ -1.19
PFDN5-219ENST00000553171 ABCC2Q92887 1545 aa7.61□□□□□ -1.19
PFDN5-219ENST00000553171 POTEAQ6S8J7 498 aa7.59□□□□□ -1.19
PFDN5-219ENST00000553171 RIMS1Q86UR5 1692 aaKnown RBP7.58□□□□□ -1.2
PFDN5-219ENST00000553171 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
PFDN5-219ENST00000553171 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
PFDN5-219ENST00000553171 ARID4BQ4LE39 1312 aaPredicted RBP7.57□□□□□ -1.2
PFDN5-219ENST00000553171 FBXO3Q9UK99 471 aa7.57□□□□□ -1.2
PFDN5-219ENST00000553171 MAGI3Q5TCQ9 1506 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms