RNA–Protein interactions for RNA: ENST00000552994.5

ZFC3H1-212, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 1 (best)

Gene ZFC3H1, Length 7,597 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-212ENST00000552994 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
ZFC3H1-212ENST00000552994 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
ZFC3H1-212ENST00000552994 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
ZFC3H1-212ENST00000552994 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.17
ZFC3H1-212ENST00000552994 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
ZFC3H1-212ENST00000552994 CASC1Q6TDU7 716 aa16.05■□□□□ 0.16
ZFC3H1-212ENST00000552994 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
ZFC3H1-212ENST00000552994 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
ZFC3H1-212ENST00000552994 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
ZFC3H1-212ENST00000552994 GOLGA2Q08379 1002 aa16■□□□□ 0.15
ZFC3H1-212ENST00000552994 BECN1Q14457 450 aa16■□□□□ 0.15
ZFC3H1-212ENST00000552994 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
ZFC3H1-212ENST00000552994 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
ZFC3H1-212ENST00000552994 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
ZFC3H1-212ENST00000552994 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
ZFC3H1-212ENST00000552994 KCNH8Q96L42 1107 aa15.98■□□□□ 0.15
ZFC3H1-212ENST00000552994 TRIM44Q96DX7 344 aaPredicted RBP15.97■□□□□ 0.15
ZFC3H1-212ENST00000552994 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
ZFC3H1-212ENST00000552994 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
ZFC3H1-212ENST00000552994 MIER1Q8N108 512 aa15.96■□□□□ 0.15
ZFC3H1-212ENST00000552994 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
ZFC3H1-212ENST00000552994 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
ZFC3H1-212ENST00000552994 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
ZFC3H1-212ENST00000552994 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
ZFC3H1-212ENST00000552994 CLSTN1O94985 981 aa15.92■□□□□ 0.14
ZFC3H1-212ENST00000552994 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
ZFC3H1-212ENST00000552994 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
ZFC3H1-212ENST00000552994 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
ZFC3H1-212ENST00000552994 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
ZFC3H1-212ENST00000552994 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
ZFC3H1-212ENST00000552994 LAS1LQ9Y4W2 734 aaKnown RBP15.88■□□□□ 0.13
ZFC3H1-212ENST00000552994 FGD1P98174 961 aa15.87■□□□□ 0.13
ZFC3H1-212ENST00000552994 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
ZFC3H1-212ENST00000552994 OS9Q13438 667 aaPredicted RBP15.87■□□□□ 0.13
ZFC3H1-212ENST00000552994 GOLGA6L6A8MZA4 724 aa15.86■□□□□ 0.13
ZFC3H1-212ENST00000552994 DNTTIP2Q5QJE6 756 aaKnown RBP15.86■□□□□ 0.13
ZFC3H1-212ENST00000552994 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
ZFC3H1-212ENST00000552994 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
ZFC3H1-212ENST00000552994 POGKQ9P215 609 aa15.84■□□□□ 0.13
ZFC3H1-212ENST00000552994 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
ZFC3H1-212ENST00000552994 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.13
ZFC3H1-212ENST00000552994 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.12
ZFC3H1-212ENST00000552994 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
ZFC3H1-212ENST00000552994 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
ZFC3H1-212ENST00000552994 KCNJ4P48050 445 aa15.81■□□□□ 0.12
ZFC3H1-212ENST00000552994 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
ZFC3H1-212ENST00000552994 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
ZFC3H1-212ENST00000552994 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
ZFC3H1-212ENST00000552994 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
ZFC3H1-212ENST00000552994 TMX4Q9H1E5 349 aaPredicted RBP15.77■□□□□ 0.12
ZFC3H1-212ENST00000552994 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.12
ZFC3H1-212ENST00000552994 NRDCO43847 1150 aa15.77■□□□□ 0.12
ZFC3H1-212ENST00000552994 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
ZFC3H1-212ENST00000552994 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
ZFC3H1-212ENST00000552994 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
ZFC3H1-212ENST00000552994 HDGFP51858 240 aaKnown RBP15.75■□□□□ 0.11
ZFC3H1-212ENST00000552994 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
ZFC3H1-212ENST00000552994 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
ZFC3H1-212ENST00000552994 DEKP35659 375 aaKnown RBP15.73■□□□□ 0.11
ZFC3H1-212ENST00000552994 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
ZFC3H1-212ENST00000552994 PRM3Q9NNZ6 103 aa15.71■□□□□ 0.1
ZFC3H1-212ENST00000552994 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
ZFC3H1-212ENST00000552994 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
ZFC3H1-212ENST00000552994 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
ZFC3H1-212ENST00000552994 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
ZFC3H1-212ENST00000552994 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
ZFC3H1-212ENST00000552994 MS4A1P11836 297 aa15.67■□□□□ 0.1
ZFC3H1-212ENST00000552994 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
ZFC3H1-212ENST00000552994 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
ZFC3H1-212ENST00000552994 GNL2Q13823 731 aaKnown RBP15.66■□□□□ 0.1
ZFC3H1-212ENST00000552994 U2SURPO15042 1029 aaKnown RBP15.66■□□□□ 0.1
ZFC3H1-212ENST00000552994 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
ZFC3H1-212ENST00000552994 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
ZFC3H1-212ENST00000552994 CARD11Q9BXL7 1154 aa15.63■□□□□ 0.09
ZFC3H1-212ENST00000552994 KANK1Q14678 1352 aa15.63■□□□□ 0.09
ZFC3H1-212ENST00000552994 MCCP23508 829 aa15.62■□□□□ 0.09
ZFC3H1-212ENST00000552994 SOX12O15370 315 aa15.61■□□□□ 0.09
ZFC3H1-212ENST00000552994 MLECQ14165 292 aa15.61■□□□□ 0.09
ZFC3H1-212ENST00000552994 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
ZFC3H1-212ENST00000552994 CHAF1AQ13111 956 aaPredicted RBP15.61■□□□□ 0.09
ZFC3H1-212ENST00000552994 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
ZFC3H1-212ENST00000552994 G3V3G9 751 aa15.6■□□□□ 0.09
ZFC3H1-212ENST00000552994 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
ZFC3H1-212ENST00000552994 RBM19Q9Y4C8 960 aaKnown RBP15.59■□□□□ 0.09
ZFC3H1-212ENST00000552994 CCDC9Q9Y3X0 531 aaKnown RBP15.58■□□□□ 0.09
ZFC3H1-212ENST00000552994 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
ZFC3H1-212ENST00000552994 NOC3LQ8WTT2 800 aaKnown RBP15.56■□□□□ 0.08
ZFC3H1-212ENST00000552994 DRC7Q8IY82 874 aa15.56■□□□□ 0.08
ZFC3H1-212ENST00000552994 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
ZFC3H1-212ENST00000552994 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
ZFC3H1-212ENST00000552994 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
ZFC3H1-212ENST00000552994 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
ZFC3H1-212ENST00000552994 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
ZFC3H1-212ENST00000552994 KRI1Q8N9T8 703 aaKnown RBP15.53■□□□□ 0.08
ZFC3H1-212ENST00000552994 CLIP1P30622 1438 aa15.52■□□□□ 0.07
ZFC3H1-212ENST00000552994 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
ZFC3H1-212ENST00000552994 KIAA1211Q6ZU35 1233 aa15.51■□□□□ 0.07
ZFC3H1-212ENST00000552994 RGS3P49796 1198 aa15.5■□□□□ 0.07
ZFC3H1-212ENST00000552994 SENP3-EIF4A1A0A087X0R7 540 aa15.5■□□□□ 0.07
ZFC3H1-212ENST00000552994 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms