RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 KLHL34Q8N239 644 aa6.55□□□□□ -1.36
TGFBR1-210ENST00000552573 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
TGFBR1-210ENST00000552573 GALR2O43603 387 aaPredicted RBP6.51□□□□□ -1.37
TGFBR1-210ENST00000552573 CLCN6P51797 869 aa6.51□□□□□ -1.37
TGFBR1-210ENST00000552573 KIF12Q96FN5 646 aa6.51□□□□□ -1.37
TGFBR1-210ENST00000552573 FAM212AQ96EL1 285 aa6.5□□□□□ -1.37
TGFBR1-210ENST00000552573 POTEIP0CG38 1075 aa6.49□□□□□ -1.37
TGFBR1-210ENST00000552573 MS4A3Q96HJ5 214 aa6.49□□□□□ -1.37
TGFBR1-210ENST00000552573 MAP3K13O43283 966 aa6.48□□□□□ -1.37
TGFBR1-210ENST00000552573 DCAF8Q5TAQ9 597 aa6.48□□□□□ -1.37
TGFBR1-210ENST00000552573 GSE1Q14687 1217 aa6.45□□□□□ -1.38
TGFBR1-210ENST00000552573 PYGBP11216 843 aa6.44□□□□□ -1.38
TGFBR1-210ENST00000552573 TRPC6Q9Y210 931 aa6.44□□□□□ -1.38
TGFBR1-210ENST00000552573 CHRM1P11229 460 aaPredicted RBP6.43□□□□□ -1.38
TGFBR1-210ENST00000552573 SGIP1Q9BQI5 828 aa6.43□□□□□ -1.38
TGFBR1-210ENST00000552573 IFNL1Q8IU54 200 aa6.42□□□□□ -1.38
TGFBR1-210ENST00000552573 PCDHB13Q9Y5F0 798 aa6.42□□□□□ -1.38
TGFBR1-210ENST00000552573 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
TGFBR1-210ENST00000552573 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
TGFBR1-210ENST00000552573 ATMINO43313 823 aaPredicted RBP6.39□□□□□ -1.39
TGFBR1-210ENST00000552573 ASTLQ6HA08 431 aaPredicted RBP6.39□□□□□ -1.39
TGFBR1-210ENST00000552573 PELP1Q8IZL8 1130 aaKnown RBP6.39□□□□□ -1.39
TGFBR1-210ENST00000552573 BMP2KQ9NSY1 1161 aaPredicted RBP6.38□□□□□ -1.39
TGFBR1-210ENST00000552573 PCDHB8Q9UN66 801 aa6.38□□□□□ -1.39
TGFBR1-210ENST00000552573 TIE1P35590 1138 aa6.37□□□□□ -1.39
TGFBR1-210ENST00000552573 ATN1P54259 1190 aaPredicted RBP6.36□□□□□ -1.39
TGFBR1-210ENST00000552573 PKD2Q13563 968 aa6.36□□□□□ -1.39
TGFBR1-210ENST00000552573 TTLL13PA6NNM8 815 aa6.35□□□□□ -1.39
TGFBR1-210ENST00000552573 TRIM41Q8WV44 630 aa6.35□□□□□ -1.39
TGFBR1-210ENST00000552573 ZNF467Q7Z7K2 595 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-210ENST00000552573 RNF25Q96BH1 459 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-210ENST00000552573 TMEM106CQ9BVX2 250 aa6.31□□□□□ -1.4
TGFBR1-210ENST00000552573 POTEFA5A3E0 1075 aa6.3□□□□□ -1.4
TGFBR1-210ENST00000552573 TRIM35Q9UPQ4 493 aa6.3□□□□□ -1.4
TGFBR1-210ENST00000552573 PSEN1P49768 467 aa6.29□□□□□ -1.4
TGFBR1-210ENST00000552573 SLC39A7Q92504 469 aa6.29□□□□□ -1.4
TGFBR1-210ENST00000552573 POTEB2H3BUK9 544 aa6.28□□□□□ -1.4
TGFBR1-210ENST00000552573 C7P10643 843 aa6.28□□□□□ -1.4
TGFBR1-210ENST00000552573 PDAP1Q13442 181 aaKnown RBP6.28□□□□□ -1.4
TGFBR1-210ENST00000552573 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
TGFBR1-210ENST00000552573 RIOK3O14730 519 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-210ENST00000552573 RGL2O15211 777 aa6.27□□□□□ -1.41
TGFBR1-210ENST00000552573 ECM2O94769 699 aaPredicted RBP6.27□□□□□ -1.41
TGFBR1-210ENST00000552573 LHX8Q68G74 356 aa6.26□□□□□ -1.41
TGFBR1-210ENST00000552573 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
TGFBR1-210ENST00000552573 IER5LQ5T953 404 aa6.25□□□□□ -1.41
TGFBR1-210ENST00000552573 POTEJP0CG39 1038 aa6.24□□□□□ -1.41
TGFBR1-210ENST00000552573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-210ENST00000552573 VGFO15240 615 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-210ENST00000552573 IRX5P78411 483 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-210ENST00000552573 ZFP91Q96JP5 570 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-210ENST00000552573 ILDR1Q86SU0 546 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-210ENST00000552573 CABP2Q9NPB3 220 aa6.21□□□□□ -1.42
TGFBR1-210ENST00000552573 PDCD7Q8N8D1 485 aaKnown RBP6.19□□□□□ -1.42
TGFBR1-210ENST00000552573 SEC24BO95487 1268 aa6.18□□□□□ -1.42
TGFBR1-210ENST00000552573 EFCAB3Q8N7B9 438 aa6.18□□□□□ -1.42
TGFBR1-210ENST00000552573 OTUD5Q96G74 571 aa6.18□□□□□ -1.42
TGFBR1-210ENST00000552573 OCEL1Q9H607 264 aa6.18□□□□□ -1.42
TGFBR1-210ENST00000552573 MKRN3Q13064 507 aaKnown RBP6.17□□□□□ -1.42
TGFBR1-210ENST00000552573 BCL11BQ9C0K0 894 aaPredicted RBP6.17□□□□□ -1.42
TGFBR1-210ENST00000552573 PLCG2P16885 1265 aa6.16□□□□□ -1.42
TGFBR1-210ENST00000552573 GOLGA2Q08379 1002 aa6.15□□□□□ -1.42
TGFBR1-210ENST00000552573 RTN4Q9NQC3 1192 aaKnown RBP6.15□□□□□ -1.42
TGFBR1-210ENST00000552573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.15□□□□□ -1.42
TGFBR1-210ENST00000552573 TAOK2Q9UL54 1235 aa6.15□□□□□ -1.42
TGFBR1-210ENST00000552573 STK25O00506 426 aa6.14□□□□□ -1.43
TGFBR1-210ENST00000552573 DPY19L2Q6NUT2 758 aa6.14□□□□□ -1.43
TGFBR1-210ENST00000552573 STK24Q9Y6E0 443 aa6.14□□□□□ -1.43
TGFBR1-210ENST00000552573 MS4A4AQ96JQ5 239 aa6.13□□□□□ -1.43
TGFBR1-210ENST00000552573 SOX12O15370 315 aa6.12□□□□□ -1.43
TGFBR1-210ENST00000552573 AMER1Q5JTC6 1135 aaPredicted RBP6.12□□□□□ -1.43
TGFBR1-210ENST00000552573 HS6ST3Q8IZP7 471 aa6.12□□□□□ -1.43
TGFBR1-210ENST00000552573 PHF8Q9UPP1 1060 aa6.12□□□□□ -1.43
TGFBR1-210ENST00000552573 FBXO22Q8NEZ5 403 aa6.11□□□□□ -1.43
TGFBR1-210ENST00000552573 MFRPQ9BY79 579 aa6.11□□□□□ -1.43
TGFBR1-210ENST00000552573 MAMSTRQ6ZN01 415 aa6.1□□□□□ -1.43
TGFBR1-210ENST00000552573 CHGAP10645 457 aaKnown RBP6.09□□□□□ -1.43
TGFBR1-210ENST00000552573 DNAJC5Q9H3Z4 198 aa6.09□□□□□ -1.43
TGFBR1-210ENST00000552573 SCUBE2Q9NQ36 999 aa6.08□□□□□ -1.44
TGFBR1-210ENST00000552573 NKX1-1Q15270 411 aaPredicted RBP6.07□□□□□ -1.44
TGFBR1-210ENST00000552573 L3MBTL3Q96JM7 780 aaPredicted RBP6.07□□□□□ -1.44
TGFBR1-210ENST00000552573 TMEM121BQ9BXQ6 578 aaPredicted RBP6.07□□□□□ -1.44
TGFBR1-210ENST00000552573 NLRP6P59044 892 aa6.06□□□□□ -1.44
TGFBR1-210ENST00000552573 BOLA1Q9Y3E2 137 aa6.06□□□□□ -1.44
TGFBR1-210ENST00000552573 MICALL2Q8IY33 904 aa6.03□□□□□ -1.44
TGFBR1-210ENST00000552573 PPP1R37O75864 691 aa6.02□□□□□ -1.45
TGFBR1-210ENST00000552573 SLAIN1Q8ND83 568 aa6.02□□□□□ -1.45
TGFBR1-210ENST00000552573 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.02□□□□□ -1.45
TGFBR1-210ENST00000552573 DCAF8L2P0C7V8 631 aa6.01□□□□□ -1.45
TGFBR1-210ENST00000552573 TMEM92Q6UXU6 159 aa6.01□□□□□ -1.45
TGFBR1-210ENST00000552573 C3orf67Q6ZVT6 689 aa6.01□□□□□ -1.45
TGFBR1-210ENST00000552573 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
TGFBR1-210ENST00000552573 GTPBP6O43824 516 aaPredicted RBP5.99□□□□□ -1.45
TGFBR1-210ENST00000552573 G3V3G9 751 aa5.97□□□□□ -1.45
TGFBR1-210ENST00000552573 KIF3CO14782 793 aa5.95□□□□□ -1.46
TGFBR1-210ENST00000552573 BBXQ8WY36 941 aaPredicted RBP5.94□□□□□ -1.46
TGFBR1-210ENST00000552573 HOXB3P14651 431 aaPredicted RBP5.93□□□□□ -1.46
TGFBR1-210ENST00000552573 FAM163AQ96GL9 167 aaPredicted RBP5.93□□□□□ -1.46
TGFBR1-210ENST00000552573 RYDENQ9NUL5 291 aaKnown RBP5.93□□□□□ -1.46
TGFBR1-210ENST00000552573 ST18O60284 1047 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms