RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 NUBP1P53384 320 aa13.61□□□□□ -0.23
PRIM1-207ENST00000552408 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
PRIM1-207ENST00000552408 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
PRIM1-207ENST00000552408 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
PRIM1-207ENST00000552408 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
PRIM1-207ENST00000552408 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
PRIM1-207ENST00000552408 LHX8Q68G74 356 aa13.53□□□□□ -0.24
PRIM1-207ENST00000552408 MAP3K13O43283 966 aa13.52□□□□□ -0.25
PRIM1-207ENST00000552408 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
PRIM1-207ENST00000552408 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
PRIM1-207ENST00000552408 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
PRIM1-207ENST00000552408 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
PRIM1-207ENST00000552408 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
PRIM1-207ENST00000552408 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
PRIM1-207ENST00000552408 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
PRIM1-207ENST00000552408 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
PRIM1-207ENST00000552408 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
PRIM1-207ENST00000552408 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
PRIM1-207ENST00000552408 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
PRIM1-207ENST00000552408 PYGBP11216 843 aa13.36□□□□□ -0.27
PRIM1-207ENST00000552408 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
PRIM1-207ENST00000552408 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
PRIM1-207ENST00000552408 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
PRIM1-207ENST00000552408 TIE1P35590 1138 aa13.29□□□□□ -0.28
PRIM1-207ENST00000552408 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
PRIM1-207ENST00000552408 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
PRIM1-207ENST00000552408 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
PRIM1-207ENST00000552408 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
PRIM1-207ENST00000552408 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
PRIM1-207ENST00000552408 C7P10643 843 aa13.24□□□□□ -0.29
PRIM1-207ENST00000552408 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
PRIM1-207ENST00000552408 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
PRIM1-207ENST00000552408 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
PRIM1-207ENST00000552408 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
PRIM1-207ENST00000552408 GSE1Q14687 1217 aa13.19□□□□□ -0.3
PRIM1-207ENST00000552408 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
PRIM1-207ENST00000552408 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
PRIM1-207ENST00000552408 SEC24BO95487 1268 aa13.07□□□□□ -0.32
PRIM1-207ENST00000552408 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
PRIM1-207ENST00000552408 IER5LQ5T953 404 aa13.03□□□□□ -0.32
PRIM1-207ENST00000552408 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
PRIM1-207ENST00000552408 PSEN1P49768 467 aa13□□□□□ -0.33
PRIM1-207ENST00000552408 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
PRIM1-207ENST00000552408 PLCG2P16885 1265 aa12.95□□□□□ -0.34
PRIM1-207ENST00000552408 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
PRIM1-207ENST00000552408 PDAP1Q13442 181 aaKnown RBP12.93□□□□□ -0.34
PRIM1-207ENST00000552408 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
PRIM1-207ENST00000552408 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
PRIM1-207ENST00000552408 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
PRIM1-207ENST00000552408 PDCD7Q8N8D1 485 aaKnown RBP12.87□□□□□ -0.35
PRIM1-207ENST00000552408 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
PRIM1-207ENST00000552408 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
PRIM1-207ENST00000552408 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
PRIM1-207ENST00000552408 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
PRIM1-207ENST00000552408 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
PRIM1-207ENST00000552408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRIM1-207ENST00000552408 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
PRIM1-207ENST00000552408 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
PRIM1-207ENST00000552408 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
PRIM1-207ENST00000552408 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
PRIM1-207ENST00000552408 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
PRIM1-207ENST00000552408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
PRIM1-207ENST00000552408 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
PRIM1-207ENST00000552408 POTEMA6NI47 508 aa12.74□□□□□ -0.37
PRIM1-207ENST00000552408 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
PRIM1-207ENST00000552408 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
PRIM1-207ENST00000552408 PKD2Q13563 968 aa12.71□□□□□ -0.37
PRIM1-207ENST00000552408 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
PRIM1-207ENST00000552408 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
PRIM1-207ENST00000552408 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
PRIM1-207ENST00000552408 RGL2O15211 777 aa12.65□□□□□ -0.38
PRIM1-207ENST00000552408 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
PRIM1-207ENST00000552408 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
PRIM1-207ENST00000552408 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
PRIM1-207ENST00000552408 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
PRIM1-207ENST00000552408 ST18O60284 1047 aa12.6□□□□□ -0.39
PRIM1-207ENST00000552408 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
PRIM1-207ENST00000552408 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
PRIM1-207ENST00000552408 STK24Q9Y6E0 443 aa12.58□□□□□ -0.4
PRIM1-207ENST00000552408 STK25O00506 426 aa12.54□□□□□ -0.4
PRIM1-207ENST00000552408 SOX12O15370 315 aa12.53□□□□□ -0.4
PRIM1-207ENST00000552408 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
PRIM1-207ENST00000552408 G3V3G9 751 aa12.52□□□□□ -0.41
PRIM1-207ENST00000552408 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
PRIM1-207ENST00000552408 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
PRIM1-207ENST00000552408 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
PRIM1-207ENST00000552408 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
PRIM1-207ENST00000552408 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
PRIM1-207ENST00000552408 MFRPQ9BY79 579 aa12.48□□□□□ -0.41
PRIM1-207ENST00000552408 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
PRIM1-207ENST00000552408 SNPHO15079 494 aa12.44□□□□□ -0.42
PRIM1-207ENST00000552408 NLRP6P59044 892 aa12.44□□□□□ -0.42
PRIM1-207ENST00000552408 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
PRIM1-207ENST00000552408 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
PRIM1-207ENST00000552408 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
PRIM1-207ENST00000552408 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
PRIM1-207ENST00000552408 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
PRIM1-207ENST00000552408 PPP1R37O75864 691 aa12.33□□□□□ -0.44
PRIM1-207ENST00000552408 EMP3P54852 163 aa12.32□□□□□ -0.44
PRIM1-207ENST00000552408 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms