RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
GNPTAB-209ENST00000552009 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
GNPTAB-209ENST00000552009 CCDC61Q9Y6R9 512 aa16.17■□□□□ 0.18
GNPTAB-209ENST00000552009 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
GNPTAB-209ENST00000552009 NUBP1P53384 320 aa16.13■□□□□ 0.17
GNPTAB-209ENST00000552009 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
GNPTAB-209ENST00000552009 MS4A3Q96HJ5 214 aa16.09■□□□□ 0.17
GNPTAB-209ENST00000552009 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
GNPTAB-209ENST00000552009 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
GNPTAB-209ENST00000552009 MAP3K13O43283 966 aa16■□□□□ 0.15
GNPTAB-209ENST00000552009 LHX8Q68G74 356 aa15.96■□□□□ 0.15
GNPTAB-209ENST00000552009 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
GNPTAB-209ENST00000552009 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
GNPTAB-209ENST00000552009 GSE1Q14687 1217 aa15.93■□□□□ 0.14
GNPTAB-209ENST00000552009 ASTLQ6HA08 431 aaPredicted RBP15.9■□□□□ 0.14
GNPTAB-209ENST00000552009 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
GNPTAB-209ENST00000552009 ATMINO43313 823 aaPredicted RBP15.88■□□□□ 0.13
GNPTAB-209ENST00000552009 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
GNPTAB-209ENST00000552009 TIE1P35590 1138 aa15.85■□□□□ 0.13
GNPTAB-209ENST00000552009 PYGBP11216 843 aa15.84■□□□□ 0.13
GNPTAB-209ENST00000552009 SLC39A7Q92504 469 aa15.83■□□□□ 0.12
GNPTAB-209ENST00000552009 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
GNPTAB-209ENST00000552009 BMP2KQ9NSY1 1161 aaPredicted RBP15.81■□□□□ 0.12
GNPTAB-209ENST00000552009 C7P10643 843 aa15.8■□□□□ 0.12
GNPTAB-209ENST00000552009 ATN1P54259 1190 aaPredicted RBP15.79■□□□□ 0.12
GNPTAB-209ENST00000552009 IFNL1Q8IU54 200 aa15.79■□□□□ 0.12
GNPTAB-209ENST00000552009 TRPC6Q9Y210 931 aa15.79■□□□□ 0.12
GNPTAB-209ENST00000552009 METRNQ9UJH8 293 aa15.77■□□□□ 0.12
GNPTAB-209ENST00000552009 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.12
GNPTAB-209ENST00000552009 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
GNPTAB-209ENST00000552009 CHRM1P11229 460 aaPredicted RBP15.7■□□□□ 0.1
GNPTAB-209ENST00000552009 TMEM106CQ9BVX2 250 aa15.7■□□□□ 0.1
GNPTAB-209ENST00000552009 ZNF467Q7Z7K2 595 aaPredicted RBP15.69■□□□□ 0.1
GNPTAB-209ENST00000552009 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
GNPTAB-209ENST00000552009 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
GNPTAB-209ENST00000552009 SEC24BO95487 1268 aa15.63■□□□□ 0.09
GNPTAB-209ENST00000552009 IER5LQ5T953 404 aa15.62■□□□□ 0.09
GNPTAB-209ENST00000552009 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
GNPTAB-209ENST00000552009 POTEB2H3BUK9 544 aa15.57■□□□□ 0.08
GNPTAB-209ENST00000552009 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
GNPTAB-209ENST00000552009 GOLGA2Q08379 1002 aa15.53■□□□□ 0.08
GNPTAB-209ENST00000552009 ABCC9O60706 1549 aa15.5■□□□□ 0.07
GNPTAB-209ENST00000552009 PSEN1P49768 467 aa15.5■□□□□ 0.07
GNPTAB-209ENST00000552009 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
GNPTAB-209ENST00000552009 PDAP1Q13442 181 aaKnown RBP15.49■□□□□ 0.07
GNPTAB-209ENST00000552009 PLCG2P16885 1265 aa15.48■□□□□ 0.07
GNPTAB-209ENST00000552009 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
GNPTAB-209ENST00000552009 COLQQ9Y215 455 aaPredicted RBP15.47■□□□□ 0.07
GNPTAB-209ENST00000552009 POTEFA5A3E0 1075 aa15.45■□□□□ 0.06
GNPTAB-209ENST00000552009 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
GNPTAB-209ENST00000552009 OCEL1Q9H607 264 aa15.41■□□□□ 0.06
GNPTAB-209ENST00000552009 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
GNPTAB-209ENST00000552009 IRX5P78411 483 aaPredicted RBP15.39■□□□□ 0.05
GNPTAB-209ENST00000552009 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
GNPTAB-209ENST00000552009 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
GNPTAB-209ENST00000552009 CABP2Q9NPB3 220 aa15.31■□□□□ 0.04
GNPTAB-209ENST00000552009 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
GNPTAB-209ENST00000552009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■■□□ 15.8
GNPTAB-209ENST00000552009 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
GNPTAB-209ENST00000552009 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
GNPTAB-209ENST00000552009 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
GNPTAB-209ENST00000552009 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
GNPTAB-209ENST00000552009 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
GNPTAB-209ENST00000552009 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
GNPTAB-209ENST00000552009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
GNPTAB-209ENST00000552009 G3V3G9 751 aa15.17■□□□□ 0.02
GNPTAB-209ENST00000552009 ZFP91Q96JP5 570 aaPredicted RBP15.17■□□□□ 0.02
GNPTAB-209ENST00000552009 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
GNPTAB-209ENST00000552009 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
GNPTAB-209ENST00000552009 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
GNPTAB-209ENST00000552009 PKD2Q13563 968 aa15.11■□□□□ 0.01
GNPTAB-209ENST00000552009 ILDR1Q86SU0 546 aaPredicted RBP15.11■□□□□ 0.01
GNPTAB-209ENST00000552009 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
GNPTAB-209ENST00000552009 SOX12O15370 315 aa15.07■□□□□ 0
GNPTAB-209ENST00000552009 BCL11BQ9C0K0 894 aaPredicted RBP15.05■□□□□ -0
GNPTAB-209ENST00000552009 STK24Q9Y6E0 443 aa15.05■□□□□ -0
GNPTAB-209ENST00000552009 DPY19L2Q6NUT2 758 aa15.04■□□□□ -0
GNPTAB-209ENST00000552009 STK25O00506 426 aa15.03■□□□□ -0
GNPTAB-209ENST00000552009 BOLA1Q9Y3E2 137 aa15.03■□□□□ -0
GNPTAB-209ENST00000552009 RGL2O15211 777 aa15.02■□□□□ -0
GNPTAB-209ENST00000552009 SNPHO15079 494 aa15.01□□□□□ -0.01
GNPTAB-209ENST00000552009 POTEMA6NI47 508 aa14.99□□□□□ -0.01
GNPTAB-209ENST00000552009 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
GNPTAB-209ENST00000552009 NLRP6P59044 892 aa14.95□□□□□ -0.02
GNPTAB-209ENST00000552009 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
GNPTAB-209ENST00000552009 TMEM121BQ9BXQ6 578 aaPredicted RBP14.88□□□□□ -0.03
GNPTAB-209ENST00000552009 LCE2DQ5TA82 110 aaPredicted RBP14.86□□□□□ -0.03
GNPTAB-209ENST00000552009 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
GNPTAB-209ENST00000552009 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
GNPTAB-209ENST00000552009 ST18O60284 1047 aa14.84□□□□□ -0.03
GNPTAB-209ENST00000552009 PCDH10Q9P2E7 1040 aa14.83□□□□□ -0.04
GNPTAB-209ENST00000552009 FBXO22Q8NEZ5 403 aa14.81□□□□□ -0.04
GNPTAB-209ENST00000552009 MFRPQ9BY79 579 aa14.81□□□□□ -0.04
GNPTAB-209ENST00000552009 HS6ST3Q8IZP7 471 aa14.76□□□□□ -0.05
GNPTAB-209ENST00000552009 CHGAP10645 457 aaKnown RBP14.75□□□□□ -0.05
GNPTAB-209ENST00000552009 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
GNPTAB-209ENST00000552009 ZNF710Q8N1W2 664 aa14.71□□□□□ -0.05
GNPTAB-209ENST00000552009 RIMBP2O15034 1052 aa14.68□□□□□ -0.06
GNPTAB-209ENST00000552009 PLSCR2Q9NRY7 297 aa14.66□□□□□ -0.06
GNPTAB-209ENST00000552009 EMP3P54852 163 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms