RNA–Protein interactions for RNA: ENST00000551552.1

AC004217.3-201, humanhuman

BASIC

Gene AC004217.3, Length 878 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004217.3-201ENST00000551552 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
AC004217.3-201ENST00000551552 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
AC004217.3-201ENST00000551552 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
AC004217.3-201ENST00000551552 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
AC004217.3-201ENST00000551552 C7P10643 843 aa13.03□□□□□ -0.32
AC004217.3-201ENST00000551552 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
AC004217.3-201ENST00000551552 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
AC004217.3-201ENST00000551552 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
AC004217.3-201ENST00000551552 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
AC004217.3-201ENST00000551552 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
AC004217.3-201ENST00000551552 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
AC004217.3-201ENST00000551552 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
AC004217.3-201ENST00000551552 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
AC004217.3-201ENST00000551552 PROM2Q8N271 834 aa12.86□□□□□ -0.35
AC004217.3-201ENST00000551552 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
AC004217.3-201ENST00000551552 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
AC004217.3-201ENST00000551552 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
AC004217.3-201ENST00000551552 MIER1Q8N108 512 aa12.82□□□□□ -0.36
AC004217.3-201ENST00000551552 MAP3K13O43283 966 aa12.81□□□□□ -0.36
AC004217.3-201ENST00000551552 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
AC004217.3-201ENST00000551552 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
AC004217.3-201ENST00000551552 TIE1P35590 1138 aa12.77□□□□□ -0.37
AC004217.3-201ENST00000551552 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
AC004217.3-201ENST00000551552 SEC24BO95487 1268 aa12.75□□□□□ -0.37
AC004217.3-201ENST00000551552 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
AC004217.3-201ENST00000551552 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
AC004217.3-201ENST00000551552 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
AC004217.3-201ENST00000551552 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
AC004217.3-201ENST00000551552 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
AC004217.3-201ENST00000551552 IER5LQ5T953 404 aa12.59□□□□□ -0.39
AC004217.3-201ENST00000551552 SGIP1Q9BQI5 828 aa12.59□□□□□ -0.39
AC004217.3-201ENST00000551552 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
AC004217.3-201ENST00000551552 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
AC004217.3-201ENST00000551552 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
AC004217.3-201ENST00000551552 NUBP1P53384 320 aa12.54□□□□□ -0.4
AC004217.3-201ENST00000551552 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
AC004217.3-201ENST00000551552 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
AC004217.3-201ENST00000551552 PLCG2P16885 1265 aa12.5□□□□□ -0.41
AC004217.3-201ENST00000551552 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
AC004217.3-201ENST00000551552 ST18O60284 1047 aa12.48□□□□□ -0.41
AC004217.3-201ENST00000551552 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
AC004217.3-201ENST00000551552 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
AC004217.3-201ENST00000551552 PYGBP11216 843 aa12.37□□□□□ -0.43
AC004217.3-201ENST00000551552 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
AC004217.3-201ENST00000551552 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
AC004217.3-201ENST00000551552 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
AC004217.3-201ENST00000551552 SNPHO15079 494 aa12.3□□□□□ -0.44
AC004217.3-201ENST00000551552 FKBP8Q14318 412 aa12.3□□□□□ -0.44
AC004217.3-201ENST00000551552 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
AC004217.3-201ENST00000551552 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
AC004217.3-201ENST00000551552 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
AC004217.3-201ENST00000551552 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
AC004217.3-201ENST00000551552 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
AC004217.3-201ENST00000551552 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
AC004217.3-201ENST00000551552 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
AC004217.3-201ENST00000551552 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
AC004217.3-201ENST00000551552 EMP3P54852 163 aa12.14□□□□□ -0.47
AC004217.3-201ENST00000551552 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
AC004217.3-201ENST00000551552 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
AC004217.3-201ENST00000551552 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
AC004217.3-201ENST00000551552 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
AC004217.3-201ENST00000551552 GSE1Q14687 1217 aa12.12□□□□□ -0.47
AC004217.3-201ENST00000551552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC004217.3-201ENST00000551552 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
AC004217.3-201ENST00000551552 PSEN1P49768 467 aa12.06□□□□□ -0.48
AC004217.3-201ENST00000551552 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
AC004217.3-201ENST00000551552 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
AC004217.3-201ENST00000551552 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
AC004217.3-201ENST00000551552 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
AC004217.3-201ENST00000551552 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
AC004217.3-201ENST00000551552 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
AC004217.3-201ENST00000551552 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
AC004217.3-201ENST00000551552 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
AC004217.3-201ENST00000551552 G3V3G9 751 aa11.97□□□□□ -0.49
AC004217.3-201ENST00000551552 PDAP1Q13442 181 aaKnown RBP11.95□□□□□ -0.5
AC004217.3-201ENST00000551552 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
AC004217.3-201ENST00000551552 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
AC004217.3-201ENST00000551552 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
AC004217.3-201ENST00000551552 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
AC004217.3-201ENST00000551552 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
AC004217.3-201ENST00000551552 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
AC004217.3-201ENST00000551552 ERBB3P21860 1342 aa11.85□□□□□ -0.51
AC004217.3-201ENST00000551552 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
AC004217.3-201ENST00000551552 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
AC004217.3-201ENST00000551552 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
AC004217.3-201ENST00000551552 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
AC004217.3-201ENST00000551552 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
AC004217.3-201ENST00000551552 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
AC004217.3-201ENST00000551552 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
AC004217.3-201ENST00000551552 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
AC004217.3-201ENST00000551552 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
AC004217.3-201ENST00000551552 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
AC004217.3-201ENST00000551552 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
AC004217.3-201ENST00000551552 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
AC004217.3-201ENST00000551552 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
AC004217.3-201ENST00000551552 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
AC004217.3-201ENST00000551552 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
AC004217.3-201ENST00000551552 SOX12O15370 315 aa11.56□□□□□ -0.56
AC004217.3-201ENST00000551552 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
AC004217.3-201ENST00000551552 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms