RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
ATP2B1-208ENST00000551009 MS4A3Q96HJ5 214 aa16.39■□□□□ 0.21
ATP2B1-208ENST00000551009 SLC39A7Q92504 469 aa16.38■□□□□ 0.21
ATP2B1-208ENST00000551009 C7P10643 843 aa16.37■□□□□ 0.21
ATP2B1-208ENST00000551009 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
ATP2B1-208ENST00000551009 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
ATP2B1-208ENST00000551009 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
ATP2B1-208ENST00000551009 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATP2B1-208ENST00000551009 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
ATP2B1-208ENST00000551009 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
ATP2B1-208ENST00000551009 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
ATP2B1-208ENST00000551009 POTEFA5A3E0 1075 aa16.17■□□□□ 0.18
ATP2B1-208ENST00000551009 TSPYL2Q9H2G4 693 aaPredicted RBP16.08■□□□□ 0.16
ATP2B1-208ENST00000551009 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
ATP2B1-208ENST00000551009 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
ATP2B1-208ENST00000551009 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
ATP2B1-208ENST00000551009 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
ATP2B1-208ENST00000551009 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
ATP2B1-208ENST00000551009 COLQQ9Y215 455 aaPredicted RBP15.95■□□□□ 0.14
ATP2B1-208ENST00000551009 TIE1P35590 1138 aa15.9■□□□□ 0.14
ATP2B1-208ENST00000551009 MAP3K13O43283 966 aa15.88■□□□□ 0.13
ATP2B1-208ENST00000551009 PROM2Q8N271 834 aa15.85■□□□□ 0.13
ATP2B1-208ENST00000551009 SEC24BO95487 1268 aa15.84■□□□□ 0.13
ATP2B1-208ENST00000551009 TTLL13PA6NNM8 815 aa15.82■□□□□ 0.12
ATP2B1-208ENST00000551009 ST18O60284 1047 aa15.81■□□□□ 0.12
ATP2B1-208ENST00000551009 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
ATP2B1-208ENST00000551009 MMRN1Q13201 1228 aa15.73■□□□□ 0.11
ATP2B1-208ENST00000551009 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
ATP2B1-208ENST00000551009 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
ATP2B1-208ENST00000551009 IER5LQ5T953 404 aa15.7■□□□□ 0.1
ATP2B1-208ENST00000551009 SPNS2Q8IVW8 549 aa15.69■□□□□ 0.1
ATP2B1-208ENST00000551009 FKBP8Q14318 412 aa15.68■□□□□ 0.1
ATP2B1-208ENST00000551009 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
ATP2B1-208ENST00000551009 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
ATP2B1-208ENST00000551009 MIER1Q8N108 512 aa15.52■□□□□ 0.08
ATP2B1-208ENST00000551009 PLCG2P16885 1265 aa15.5■□□□□ 0.07
ATP2B1-208ENST00000551009 TMEM121BQ9BXQ6 578 aaPredicted RBP15.5■□□□□ 0.07
ATP2B1-208ENST00000551009 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
ATP2B1-208ENST00000551009 IFNL1Q8IU54 200 aa15.49■□□□□ 0.07
ATP2B1-208ENST00000551009 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
ATP2B1-208ENST00000551009 MARVELD3Q96A59 401 aa15.46■□□□□ 0.07
ATP2B1-208ENST00000551009 TMEM106CQ9BVX2 250 aa15.46■□□□□ 0.07
ATP2B1-208ENST00000551009 SNPHO15079 494 aa15.38■□□□□ 0.05
ATP2B1-208ENST00000551009 NUBP1P53384 320 aa15.36■□□□□ 0.05
ATP2B1-208ENST00000551009 OCEL1Q9H607 264 aa15.33■□□□□ 0.04
ATP2B1-208ENST00000551009 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
ATP2B1-208ENST00000551009 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
ATP2B1-208ENST00000551009 KRTAP3-3Q9BYR6 98 aa15.27■□□□□ 0.04
ATP2B1-208ENST00000551009 KRTAP3-2Q9BYR7 98 aa15.27■□□□□ 0.04
ATP2B1-208ENST00000551009 POTEB3A0JP26 581 aa15.25■□□□□ 0.03
ATP2B1-208ENST00000551009 POTEBQ6S5H4 581 aa15.25■□□□□ 0.03
ATP2B1-208ENST00000551009 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
ATP2B1-208ENST00000551009 EMP3P54852 163 aa15.23■□□□□ 0.03
ATP2B1-208ENST00000551009 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
ATP2B1-208ENST00000551009 HS3ST6Q96QI5 342 aa15.19■□□□□ 0.02
ATP2B1-208ENST00000551009 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
ATP2B1-208ENST00000551009 FAM205CA6NFA0 338 aa15.14■□□□□ 0.01
ATP2B1-208ENST00000551009 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
ATP2B1-208ENST00000551009 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
ATP2B1-208ENST00000551009 PYGBP11216 843 aa15.08■□□□□ 0
ATP2B1-208ENST00000551009 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
ATP2B1-208ENST00000551009 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
ATP2B1-208ENST00000551009 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
ATP2B1-208ENST00000551009 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
ATP2B1-208ENST00000551009 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
ATP2B1-208ENST00000551009 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
ATP2B1-208ENST00000551009 HOXB3P14651 431 aaPredicted RBP14.87□□□□□ -0.03
ATP2B1-208ENST00000551009 RNF166Q96A37 237 aaPredicted RBP14.87□□□□□ -0.03
ATP2B1-208ENST00000551009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.87□□□□□ -0.031e-11■■■■■ 53.1
ATP2B1-208ENST00000551009 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
ATP2B1-208ENST00000551009 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
ATP2B1-208ENST00000551009 HOXB1P14653 301 aaPredicted RBP14.8□□□□□ -0.04
ATP2B1-208ENST00000551009 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
ATP2B1-208ENST00000551009 ILDR1Q86SU0 546 aaPredicted RBP14.79□□□□□ -0.04
ATP2B1-208ENST00000551009 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
ATP2B1-208ENST00000551009 ERBB3P21860 1342 aa14.76□□□□□ -0.05
ATP2B1-208ENST00000551009 GSE1Q14687 1217 aa14.73□□□□□ -0.05
ATP2B1-208ENST00000551009 SPOCK2Q92563 424 aa14.73□□□□□ -0.05
ATP2B1-208ENST00000551009 MYT1LQ9UL68 1186 aa14.73□□□□□ -0.05
ATP2B1-208ENST00000551009 PSEN1P49768 467 aa14.72□□□□□ -0.05
ATP2B1-208ENST00000551009 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
ATP2B1-208ENST00000551009 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
ATP2B1-208ENST00000551009 VARS2Q5ST30 1063 aaKnown RBP14.66□□□□□ -0.06
ATP2B1-208ENST00000551009 DOK7Q18PE1 504 aa14.64□□□□□ -0.07
ATP2B1-208ENST00000551009 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
ATP2B1-208ENST00000551009 G3V3G9 751 aa14.61□□□□□ -0.07
ATP2B1-208ENST00000551009 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
ATP2B1-208ENST00000551009 ZNF687Q8N1G0 1237 aa14.56□□□□□ -0.08
ATP2B1-208ENST00000551009 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
ATP2B1-208ENST00000551009 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
ATP2B1-208ENST00000551009 RIMBP2O15034 1052 aa14.52□□□□□ -0.09
ATP2B1-208ENST00000551009 PTGER2P43116 358 aa14.49□□□□□ -0.09
ATP2B1-208ENST00000551009 GPR153Q6NV75 609 aa14.44□□□□□ -0.1
ATP2B1-208ENST00000551009 TMEM92Q6UXU6 159 aa14.43□□□□□ -0.1
ATP2B1-208ENST00000551009 ZSWIM6Q9HCJ5 1215 aa14.43□□□□□ -0.1
ATP2B1-208ENST00000551009 ANKRD13DQ6ZTN6 518 aa14.41□□□□□ -0.1
ATP2B1-208ENST00000551009 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
ATP2B1-208ENST00000551009 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
ATP2B1-208ENST00000551009 EFCAB3Q8N7B9 438 aa14.3□□□□□ -0.12
ATP2B1-208ENST00000551009 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms