RNA–Protein interactions for RNA: ENST00000550994.1

HNRNPA1-210, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 4

Gene HNRNPA1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-210ENST00000550994 WDR62O43379 1518 aa14□□□□□ -0.17
HNRNPA1-210ENST00000550994 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
HNRNPA1-210ENST00000550994 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
HNRNPA1-210ENST00000550994 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
HNRNPA1-210ENST00000550994 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
HNRNPA1-210ENST00000550994 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
HNRNPA1-210ENST00000550994 CFTRP13569 1480 aa13.83□□□□□ -0.2
HNRNPA1-210ENST00000550994 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
HNRNPA1-210ENST00000550994 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
HNRNPA1-210ENST00000550994 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
HNRNPA1-210ENST00000550994 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
HNRNPA1-210ENST00000550994 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
HNRNPA1-210ENST00000550994 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
HNRNPA1-210ENST00000550994 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
HNRNPA1-210ENST00000550994 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
HNRNPA1-210ENST00000550994 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
HNRNPA1-210ENST00000550994 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
HNRNPA1-210ENST00000550994 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
HNRNPA1-210ENST00000550994 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
HNRNPA1-210ENST00000550994 EVX2Q03828 476 aa13.65□□□□□ -0.22
HNRNPA1-210ENST00000550994 CCDC88BA6NC98 1476 aa13.63□□□□□ -0.23
HNRNPA1-210ENST00000550994 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
HNRNPA1-210ENST00000550994 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
HNRNPA1-210ENST00000550994 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
HNRNPA1-210ENST00000550994 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
HNRNPA1-210ENST00000550994 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
HNRNPA1-210ENST00000550994 HAX1O00165 279 aa13.59□□□□□ -0.23
HNRNPA1-210ENST00000550994 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
HNRNPA1-210ENST00000550994 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
HNRNPA1-210ENST00000550994 CHD1O14646 1710 aa13.56□□□□□ -0.24
HNRNPA1-210ENST00000550994 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
HNRNPA1-210ENST00000550994 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
HNRNPA1-210ENST00000550994 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
HNRNPA1-210ENST00000550994 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.254e-13■■■■□ 21.4
HNRNPA1-210ENST00000550994 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
HNRNPA1-210ENST00000550994 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
HNRNPA1-210ENST00000550994 ARAP1Q96P48 1450 aa13.47□□□□□ -0.25
HNRNPA1-210ENST00000550994 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
HNRNPA1-210ENST00000550994 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
HNRNPA1-210ENST00000550994 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
HNRNPA1-210ENST00000550994 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
HNRNPA1-210ENST00000550994 SOGA1O94964 1423 aa13.39□□□□□ -0.27
HNRNPA1-210ENST00000550994 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
HNRNPA1-210ENST00000550994 PROM2Q8N271 834 aa13.38□□□□□ -0.27
HNRNPA1-210ENST00000550994 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
HNRNPA1-210ENST00000550994 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
HNRNPA1-210ENST00000550994 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
HNRNPA1-210ENST00000550994 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
HNRNPA1-210ENST00000550994 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
HNRNPA1-210ENST00000550994 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
HNRNPA1-210ENST00000550994 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
HNRNPA1-210ENST00000550994 CUX1P39880 1505 aa13.33□□□□□ -0.28
HNRNPA1-210ENST00000550994 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
HNRNPA1-210ENST00000550994 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
HNRNPA1-210ENST00000550994 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
HNRNPA1-210ENST00000550994 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
HNRNPA1-210ENST00000550994 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
HNRNPA1-210ENST00000550994 GABBR2O75899 941 aa13.22□□□□□ -0.29
HNRNPA1-210ENST00000550994 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
HNRNPA1-210ENST00000550994 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
HNRNPA1-210ENST00000550994 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
HNRNPA1-210ENST00000550994 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
HNRNPA1-210ENST00000550994 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
HNRNPA1-210ENST00000550994 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
HNRNPA1-210ENST00000550994 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
HNRNPA1-210ENST00000550994 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
HNRNPA1-210ENST00000550994 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
HNRNPA1-210ENST00000550994 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
HNRNPA1-210ENST00000550994 NUP160Q12769 1436 aa13.07□□□□□ -0.32
HNRNPA1-210ENST00000550994 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
HNRNPA1-210ENST00000550994 FKBP8Q14318 412 aa13.07□□□□□ -0.32
HNRNPA1-210ENST00000550994 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
HNRNPA1-210ENST00000550994 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
HNRNPA1-210ENST00000550994 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
HNRNPA1-210ENST00000550994 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
HNRNPA1-210ENST00000550994 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
HNRNPA1-210ENST00000550994 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
HNRNPA1-210ENST00000550994 ERICH3Q5RHP9 1530 aa13.02□□□□□ -0.33
HNRNPA1-210ENST00000550994 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
HNRNPA1-210ENST00000550994 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
HNRNPA1-210ENST00000550994 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
HNRNPA1-210ENST00000550994 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
HNRNPA1-210ENST00000550994 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
HNRNPA1-210ENST00000550994 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
HNRNPA1-210ENST00000550994 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
HNRNPA1-210ENST00000550994 FAM69CQ0P6D2 419 aa12.9□□□□□ -0.34
HNRNPA1-210ENST00000550994 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
HNRNPA1-210ENST00000550994 DIP2BQ9P265 1576 aa12.9□□□□□ -0.35
HNRNPA1-210ENST00000550994 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
HNRNPA1-210ENST00000550994 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
HNRNPA1-210ENST00000550994 MIER1Q8N108 512 aa12.88□□□□□ -0.35
HNRNPA1-210ENST00000550994 KDM6BO15054 1643 aa12.86□□□□□ -0.35
HNRNPA1-210ENST00000550994 TSPOAP1O95153 1857 aa12.86□□□□□ -0.35
HNRNPA1-210ENST00000550994 CLCN6P51797 869 aa12.85□□□□□ -0.35
HNRNPA1-210ENST00000550994 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
HNRNPA1-210ENST00000550994 CUL7Q14999 1698 aa12.83□□□□□ -0.35
HNRNPA1-210ENST00000550994 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
HNRNPA1-210ENST00000550994 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
HNRNPA1-210ENST00000550994 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
HNRNPA1-210ENST00000550994 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms