RNA–Protein interactions for RNA: ENST00000550814.5

LETMD1-227, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-227ENST00000550814 GSE1Q14687 1217 aa11.45□□□□□ -0.58
LETMD1-227ENST00000550814 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-227ENST00000550814 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
LETMD1-227ENST00000550814 PKD2Q13563 968 aa11.41□□□□□ -0.58
LETMD1-227ENST00000550814 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
LETMD1-227ENST00000550814 PYGBP11216 843 aa11.36□□□□□ -0.59
LETMD1-227ENST00000550814 KIF12Q96FN5 646 aa11.36□□□□□ -0.59
LETMD1-227ENST00000550814 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
LETMD1-227ENST00000550814 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
LETMD1-227ENST00000550814 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
LETMD1-227ENST00000550814 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-227ENST00000550814 MAP3K13O43283 966 aa11.32□□□□□ -0.6
LETMD1-227ENST00000550814 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
LETMD1-227ENST00000550814 GABBR2O75899 941 aa11.29□□□□□ -0.6
LETMD1-227ENST00000550814 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-227ENST00000550814 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
LETMD1-227ENST00000550814 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-227ENST00000550814 CLCN6P51797 869 aa11.26□□□□□ -0.61
LETMD1-227ENST00000550814 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-227ENST00000550814 SGIP1Q9BQI5 828 aa11.26□□□□□ -0.61
LETMD1-227ENST00000550814 PCDHB13Q9Y5F0 798 aa11.26□□□□□ -0.61
LETMD1-227ENST00000550814 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
LETMD1-227ENST00000550814 RGL2O15211 777 aa11.22□□□□□ -0.61
LETMD1-227ENST00000550814 PCDHB8Q9UN66 801 aa11.22□□□□□ -0.61
LETMD1-227ENST00000550814 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
LETMD1-227ENST00000550814 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
LETMD1-227ENST00000550814 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
LETMD1-227ENST00000550814 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
LETMD1-227ENST00000550814 TIE1P35590 1138 aa11.1□□□□□ -0.63
LETMD1-227ENST00000550814 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
LETMD1-227ENST00000550814 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-227ENST00000550814 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
LETMD1-227ENST00000550814 PSEN1P49768 467 aa11.09□□□□□ -0.63
LETMD1-227ENST00000550814 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
LETMD1-227ENST00000550814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-227ENST00000550814 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-227ENST00000550814 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-227ENST00000550814 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-227ENST00000550814 DCBLD2Q96PD2 775 aa11.05□□□□□ -0.64
LETMD1-227ENST00000550814 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
LETMD1-227ENST00000550814 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-227ENST00000550814 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
LETMD1-227ENST00000550814 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
LETMD1-227ENST00000550814 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
LETMD1-227ENST00000550814 STK25O00506 426 aa10.98□□□□□ -0.65
LETMD1-227ENST00000550814 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
LETMD1-227ENST00000550814 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-227ENST00000550814 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
LETMD1-227ENST00000550814 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
LETMD1-227ENST00000550814 CABP2Q9NPB3 220 aa10.95□□□□□ -0.66
LETMD1-227ENST00000550814 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
LETMD1-227ENST00000550814 EFCAB3Q8N7B9 438 aa10.9□□□□□ -0.66
LETMD1-227ENST00000550814 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
LETMD1-227ENST00000550814 IER5LQ5T953 404 aa10.88□□□□□ -0.67
LETMD1-227ENST00000550814 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
LETMD1-227ENST00000550814 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
LETMD1-227ENST00000550814 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
LETMD1-227ENST00000550814 C7P10643 843 aa10.86□□□□□ -0.67
LETMD1-227ENST00000550814 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
LETMD1-227ENST00000550814 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-227ENST00000550814 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-227ENST00000550814 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
LETMD1-227ENST00000550814 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-227ENST00000550814 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-227ENST00000550814 SOX12O15370 315 aa10.83□□□□□ -0.68
LETMD1-227ENST00000550814 MFRPQ9BY79 579 aa10.82□□□□□ -0.68
LETMD1-227ENST00000550814 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
LETMD1-227ENST00000550814 PDCD7Q8N8D1 485 aaKnown RBP10.8□□□□□ -0.68
LETMD1-227ENST00000550814 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
LETMD1-227ENST00000550814 BBXQ8WY36 941 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-227ENST00000550814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
LETMD1-227ENST00000550814 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
LETMD1-227ENST00000550814 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
LETMD1-227ENST00000550814 SEC24BO95487 1268 aa10.76□□□□□ -0.69
LETMD1-227ENST00000550814 PLCG2P16885 1265 aa10.76□□□□□ -0.69
LETMD1-227ENST00000550814 NLRP6P59044 892 aa10.76□□□□□ -0.69
LETMD1-227ENST00000550814 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
LETMD1-227ENST00000550814 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
LETMD1-227ENST00000550814 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
LETMD1-227ENST00000550814 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
LETMD1-227ENST00000550814 PPP1R37O75864 691 aa10.68□□□□□ -0.7
LETMD1-227ENST00000550814 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
LETMD1-227ENST00000550814 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.7
LETMD1-227ENST00000550814 LHX8Q68G74 356 aa10.64□□□□□ -0.71
LETMD1-227ENST00000550814 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
LETMD1-227ENST00000550814 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
LETMD1-227ENST00000550814 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-227ENST00000550814 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
LETMD1-227ENST00000550814 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
LETMD1-227ENST00000550814 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
LETMD1-227ENST00000550814 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
LETMD1-227ENST00000550814 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
LETMD1-227ENST00000550814 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
LETMD1-227ENST00000550814 G3V3G9 751 aa10.53□□□□□ -0.72
LETMD1-227ENST00000550814 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
LETMD1-227ENST00000550814 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
LETMD1-227ENST00000550814 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
LETMD1-227ENST00000550814 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
LETMD1-227ENST00000550814 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
LETMD1-227ENST00000550814 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms