RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
AL355112.1-201ENST00000550309 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
AL355112.1-201ENST00000550309 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
AL355112.1-201ENST00000550309 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
AL355112.1-201ENST00000550309 KIF12Q96FN5 646 aa14.6□□□□□ -0.07
AL355112.1-201ENST00000550309 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
AL355112.1-201ENST00000550309 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
AL355112.1-201ENST00000550309 C7P10643 843 aa14.57□□□□□ -0.08
AL355112.1-201ENST00000550309 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
AL355112.1-201ENST00000550309 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
AL355112.1-201ENST00000550309 MAP3K13O43283 966 aa14.51□□□□□ -0.09
AL355112.1-201ENST00000550309 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
AL355112.1-201ENST00000550309 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
AL355112.1-201ENST00000550309 BMP2KQ9NSY1 1161 aaPredicted RBP14.48□□□□□ -0.09
AL355112.1-201ENST00000550309 FKBP8Q14318 412 aa14.45□□□□□ -0.1
AL355112.1-201ENST00000550309 TIE1P35590 1138 aa14.42□□□□□ -0.1
AL355112.1-201ENST00000550309 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
AL355112.1-201ENST00000550309 NUBP1P53384 320 aa14.4□□□□□ -0.1
AL355112.1-201ENST00000550309 MAMSTRQ6ZN01 415 aa14.4□□□□□ -0.1
AL355112.1-201ENST00000550309 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
AL355112.1-201ENST00000550309 TTLL13PA6NNM8 815 aa14.35□□□□□ -0.11
AL355112.1-201ENST00000550309 PLSCR2Q9NRY7 297 aa14.35□□□□□ -0.11
AL355112.1-201ENST00000550309 PCDHB13Q9Y5F0 798 aa14.35□□□□□ -0.11
AL355112.1-201ENST00000550309 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
AL355112.1-201ENST00000550309 POTEMA6NI47 508 aa14.33□□□□□ -0.12
AL355112.1-201ENST00000550309 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
AL355112.1-201ENST00000550309 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
AL355112.1-201ENST00000550309 POTEGQ6S5H5 508 aa14.29□□□□□ -0.12
AL355112.1-201ENST00000550309 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
AL355112.1-201ENST00000550309 SEC24BO95487 1268 aa14.26□□□□□ -0.13
AL355112.1-201ENST00000550309 IFNL1Q8IU54 200 aa14.26□□□□□ -0.13
AL355112.1-201ENST00000550309 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
AL355112.1-201ENST00000550309 IER5LQ5T953 404 aa14.22□□□□□ -0.13
AL355112.1-201ENST00000550309 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
AL355112.1-201ENST00000550309 LCE2DQ5TA82 110 aaPredicted RBP14.18□□□□□ -0.14
AL355112.1-201ENST00000550309 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
AL355112.1-201ENST00000550309 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
AL355112.1-201ENST00000550309 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
AL355112.1-201ENST00000550309 PYGBP11216 843 aa14.12□□□□□ -0.15
AL355112.1-201ENST00000550309 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
AL355112.1-201ENST00000550309 PLCG2P16885 1265 aa14.06□□□□□ -0.16
AL355112.1-201ENST00000550309 PCDHB8Q9UN66 801 aa14.04□□□□□ -0.16
AL355112.1-201ENST00000550309 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
AL355112.1-201ENST00000550309 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
AL355112.1-201ENST00000550309 KLHL34Q8N239 644 aa14.02□□□□□ -0.17
AL355112.1-201ENST00000550309 SLAIN1Q8ND83 568 aa14□□□□□ -0.17
AL355112.1-201ENST00000550309 GSE1Q14687 1217 aa13.96□□□□□ -0.17
AL355112.1-201ENST00000550309 OCEL1Q9H607 264 aa13.96□□□□□ -0.17
AL355112.1-201ENST00000550309 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
AL355112.1-201ENST00000550309 ST18O60284 1047 aa13.87□□□□□ -0.19
AL355112.1-201ENST00000550309 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
AL355112.1-201ENST00000550309 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
AL355112.1-201ENST00000550309 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
AL355112.1-201ENST00000550309 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
AL355112.1-201ENST00000550309 PDCD7Q8N8D1 485 aaKnown RBP13.81□□□□□ -0.2
AL355112.1-201ENST00000550309 PSEN1P49768 467 aa13.8□□□□□ -0.2
AL355112.1-201ENST00000550309 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
AL355112.1-201ENST00000550309 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
AL355112.1-201ENST00000550309 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
AL355112.1-201ENST00000550309 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
AL355112.1-201ENST00000550309 SNPHO15079 494 aa13.74□□□□□ -0.21
AL355112.1-201ENST00000550309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
AL355112.1-201ENST00000550309 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
AL355112.1-201ENST00000550309 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
AL355112.1-201ENST00000550309 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
AL355112.1-201ENST00000550309 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
AL355112.1-201ENST00000550309 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
AL355112.1-201ENST00000550309 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
AL355112.1-201ENST00000550309 MARVELD3Q96A59 401 aa13.64□□□□□ -0.23
AL355112.1-201ENST00000550309 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
AL355112.1-201ENST00000550309 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
AL355112.1-201ENST00000550309 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
AL355112.1-201ENST00000550309 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
AL355112.1-201ENST00000550309 BOLA1Q9Y3E2 137 aa13.53□□□□□ -0.24
AL355112.1-201ENST00000550309 EMP3P54852 163 aa13.52□□□□□ -0.25
AL355112.1-201ENST00000550309 G3V3G9 751 aa13.51□□□□□ -0.25
AL355112.1-201ENST00000550309 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
AL355112.1-201ENST00000550309 SPNS2Q8IVW8 549 aa13.5□□□□□ -0.25
AL355112.1-201ENST00000550309 MMRN1Q13201 1228 aa13.46□□□□□ -0.25
AL355112.1-201ENST00000550309 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
AL355112.1-201ENST00000550309 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
AL355112.1-201ENST00000550309 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
AL355112.1-201ENST00000550309 HS3ST6Q96QI5 342 aa13.43□□□□□ -0.26
AL355112.1-201ENST00000550309 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
AL355112.1-201ENST00000550309 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
AL355112.1-201ENST00000550309 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
AL355112.1-201ENST00000550309 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
AL355112.1-201ENST00000550309 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
AL355112.1-201ENST00000550309 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
AL355112.1-201ENST00000550309 ZNF710Q8N1W2 664 aa13.34□□□□□ -0.27
AL355112.1-201ENST00000550309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
AL355112.1-201ENST00000550309 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
AL355112.1-201ENST00000550309 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
AL355112.1-201ENST00000550309 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
AL355112.1-201ENST00000550309 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
AL355112.1-201ENST00000550309 SOX12O15370 315 aa13.3□□□□□ -0.28
AL355112.1-201ENST00000550309 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
AL355112.1-201ENST00000550309 TMEM92Q6UXU6 159 aa13.28□□□□□ -0.28
AL355112.1-201ENST00000550309 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
AL355112.1-201ENST00000550309 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms