RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 GSE1Q14687 1217 aa12.52□□□□□ -0.4
TGFBR1-208ENST00000550253 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.4
TGFBR1-208ENST00000550253 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
TGFBR1-208ENST00000550253 NUBP1P53384 320 aa12.48□□□□□ -0.41
TGFBR1-208ENST00000550253 RIOK3O14730 519 aaKnown RBP12.45□□□□□ -0.42
TGFBR1-208ENST00000550253 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
TGFBR1-208ENST00000550253 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
TGFBR1-208ENST00000550253 STK25O00506 426 aa12.35□□□□□ -0.43
TGFBR1-208ENST00000550253 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
TGFBR1-208ENST00000550253 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
TGFBR1-208ENST00000550253 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
TGFBR1-208ENST00000550253 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
TGFBR1-208ENST00000550253 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
TGFBR1-208ENST00000550253 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
TGFBR1-208ENST00000550253 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.44
TGFBR1-208ENST00000550253 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
TGFBR1-208ENST00000550253 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
TGFBR1-208ENST00000550253 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
TGFBR1-208ENST00000550253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
TGFBR1-208ENST00000550253 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
TGFBR1-208ENST00000550253 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
TGFBR1-208ENST00000550253 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
TGFBR1-208ENST00000550253 RASEFQ8IZ41 740 aa12.21□□□□□ -0.46
TGFBR1-208ENST00000550253 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
TGFBR1-208ENST00000550253 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
TGFBR1-208ENST00000550253 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
TGFBR1-208ENST00000550253 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
TGFBR1-208ENST00000550253 PYGBP11216 843 aa12.12□□□□□ -0.47
TGFBR1-208ENST00000550253 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
TGFBR1-208ENST00000550253 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
TGFBR1-208ENST00000550253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
TGFBR1-208ENST00000550253 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
TGFBR1-208ENST00000550253 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
TGFBR1-208ENST00000550253 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
TGFBR1-208ENST00000550253 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
TGFBR1-208ENST00000550253 ARXQ96QS3 562 aa12.03□□□□□ -0.48
TGFBR1-208ENST00000550253 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.48
TGFBR1-208ENST00000550253 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
TGFBR1-208ENST00000550253 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
TGFBR1-208ENST00000550253 ABCC9O60706 1549 aa11.96□□□□□ -0.49
TGFBR1-208ENST00000550253 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.5
TGFBR1-208ENST00000550253 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
TGFBR1-208ENST00000550253 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
TGFBR1-208ENST00000550253 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
TGFBR1-208ENST00000550253 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
TGFBR1-208ENST00000550253 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
TGFBR1-208ENST00000550253 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-208ENST00000550253 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
TGFBR1-208ENST00000550253 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
TGFBR1-208ENST00000550253 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
TGFBR1-208ENST00000550253 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
TGFBR1-208ENST00000550253 PPP1R37O75864 691 aa11.82□□□□□ -0.52
TGFBR1-208ENST00000550253 PSEN1P49768 467 aa11.82□□□□□ -0.52
TGFBR1-208ENST00000550253 E2F4Q16254 413 aa11.82□□□□□ -0.52
TGFBR1-208ENST00000550253 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
TGFBR1-208ENST00000550253 CCDC180Q9P1Z9 1646 aa11.8□□□□□ -0.52
TGFBR1-208ENST00000550253 SEMA3EO15041 775 aa11.8□□□□□ -0.52
TGFBR1-208ENST00000550253 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
TGFBR1-208ENST00000550253 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-208ENST00000550253 FBXO22Q8NEZ5 403 aa11.78□□□□□ -0.52
TGFBR1-208ENST00000550253 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
TGFBR1-208ENST00000550253 NEUROD2Q15784 382 aa11.77□□□□□ -0.52
TGFBR1-208ENST00000550253 HOMEZQ8IX15 550 aa11.77□□□□□ -0.52
TGFBR1-208ENST00000550253 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.52
TGFBR1-208ENST00000550253 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
TGFBR1-208ENST00000550253 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
TGFBR1-208ENST00000550253 NLRP6P59044 892 aa11.72□□□□□ -0.53
TGFBR1-208ENST00000550253 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
TGFBR1-208ENST00000550253 SOX12O15370 315 aa11.71□□□□□ -0.53
TGFBR1-208ENST00000550253 ZMYND10O75800 440 aa11.71□□□□□ -0.53
TGFBR1-208ENST00000550253 PHF8Q9UPP1 1060 aa11.7□□□□□ -0.54
TGFBR1-208ENST00000550253 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
TGFBR1-208ENST00000550253 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
TGFBR1-208ENST00000550253 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
TGFBR1-208ENST00000550253 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
TGFBR1-208ENST00000550253 MFSD10Q14728 455 aa11.65□□□□□ -0.55
TGFBR1-208ENST00000550253 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.55
TGFBR1-208ENST00000550253 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
TGFBR1-208ENST00000550253 PDE4AP27815 886 aa11.62□□□□□ -0.55
TGFBR1-208ENST00000550253 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
TGFBR1-208ENST00000550253 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
TGFBR1-208ENST00000550253 MAP3K13O43283 966 aa11.6□□□□□ -0.55
TGFBR1-208ENST00000550253 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
TGFBR1-208ENST00000550253 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
TGFBR1-208ENST00000550253 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
TGFBR1-208ENST00000550253 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
TGFBR1-208ENST00000550253 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-208ENST00000550253 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-208ENST00000550253 AK7Q96M32 723 aa11.53□□□□□ -0.56
TGFBR1-208ENST00000550253 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
TGFBR1-208ENST00000550253 RBM26Q5T8P6 1007 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-208ENST00000550253 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
TGFBR1-208ENST00000550253 MLLT3P42568 568 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-208ENST00000550253 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
TGFBR1-208ENST00000550253 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
TGFBR1-208ENST00000550253 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
TGFBR1-208ENST00000550253 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
TGFBR1-208ENST00000550253 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
TGFBR1-208ENST00000550253 TRIM66O15016 1216 aa11.41□□□□□ -0.58
TGFBR1-208ENST00000550253 ZMYND15Q9H091 742 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms