RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 MS4A3Q96HJ5 214 aa14.3□□□□□ -0.12
ARPC3-208ENST00000548878 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
ARPC3-208ENST00000548878 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
ARPC3-208ENST00000548878 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
ARPC3-208ENST00000548878 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
ARPC3-208ENST00000548878 ATMINO43313 823 aaPredicted RBP14.19□□□□□ -0.14
ARPC3-208ENST00000548878 NUBP1P53384 320 aa14.19□□□□□ -0.14
ARPC3-208ENST00000548878 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
ARPC3-208ENST00000548878 MAP3K13O43283 966 aa14.15□□□□□ -0.14
ARPC3-208ENST00000548878 C7P10643 843 aa14.15□□□□□ -0.14
ARPC3-208ENST00000548878 SLC39A7Q92504 469 aa14.15□□□□□ -0.14
ARPC3-208ENST00000548878 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
ARPC3-208ENST00000548878 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
ARPC3-208ENST00000548878 METRNQ9UJH8 293 aa14.1□□□□□ -0.15
ARPC3-208ENST00000548878 TIE1P35590 1138 aa14.09□□□□□ -0.15
ARPC3-208ENST00000548878 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
ARPC3-208ENST00000548878 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
ARPC3-208ENST00000548878 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
ARPC3-208ENST00000548878 OTUD5Q96G74 571 aa14.04□□□□□ -0.16
ARPC3-208ENST00000548878 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
ARPC3-208ENST00000548878 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
ARPC3-208ENST00000548878 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
ARPC3-208ENST00000548878 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
ARPC3-208ENST00000548878 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
ARPC3-208ENST00000548878 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
ARPC3-208ENST00000548878 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
ARPC3-208ENST00000548878 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
ARPC3-208ENST00000548878 IER5LQ5T953 404 aa13.9□□□□□ -0.18
ARPC3-208ENST00000548878 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
ARPC3-208ENST00000548878 GSE1Q14687 1217 aa13.88□□□□□ -0.19
ARPC3-208ENST00000548878 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
ARPC3-208ENST00000548878 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
ARPC3-208ENST00000548878 PYGBP11216 843 aa13.86□□□□□ -0.19
ARPC3-208ENST00000548878 SEC24BO95487 1268 aa13.85□□□□□ -0.19
ARPC3-208ENST00000548878 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
ARPC3-208ENST00000548878 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
ARPC3-208ENST00000548878 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
ARPC3-208ENST00000548878 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
ARPC3-208ENST00000548878 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
ARPC3-208ENST00000548878 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
ARPC3-208ENST00000548878 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
ARPC3-208ENST00000548878 IFNLR1Q8IU57 520 aaPredicted RBP13.74□□□□□ -0.21
ARPC3-208ENST00000548878 PLCG2P16885 1265 aa13.7□□□□□ -0.22
ARPC3-208ENST00000548878 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
ARPC3-208ENST00000548878 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
ARPC3-208ENST00000548878 POTEMA6NI47 508 aa13.62□□□□□ -0.23
ARPC3-208ENST00000548878 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
ARPC3-208ENST00000548878 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
ARPC3-208ENST00000548878 PSEN1P49768 467 aa13.58□□□□□ -0.24
ARPC3-208ENST00000548878 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
ARPC3-208ENST00000548878 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
ARPC3-208ENST00000548878 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
ARPC3-208ENST00000548878 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
ARPC3-208ENST00000548878 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
ARPC3-208ENST00000548878 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
ARPC3-208ENST00000548878 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
ARPC3-208ENST00000548878 LCE2DQ5TA82 110 aaPredicted RBP13.52□□□□□ -0.25
ARPC3-208ENST00000548878 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
ARPC3-208ENST00000548878 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.25
ARPC3-208ENST00000548878 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
ARPC3-208ENST00000548878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
ARPC3-208ENST00000548878 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
ARPC3-208ENST00000548878 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
ARPC3-208ENST00000548878 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
ARPC3-208ENST00000548878 SNPHO15079 494 aa13.38□□□□□ -0.27
ARPC3-208ENST00000548878 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
ARPC3-208ENST00000548878 ST18O60284 1047 aa13.34□□□□□ -0.27
ARPC3-208ENST00000548878 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
ARPC3-208ENST00000548878 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
ARPC3-208ENST00000548878 G3V3G9 751 aa13.27□□□□□ -0.29
ARPC3-208ENST00000548878 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
ARPC3-208ENST00000548878 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
ARPC3-208ENST00000548878 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
ARPC3-208ENST00000548878 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
ARPC3-208ENST00000548878 RNF25Q96BH1 459 aaPredicted RBP13.23□□□□□ -0.29
ARPC3-208ENST00000548878 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
ARPC3-208ENST00000548878 SOX12O15370 315 aa13.2□□□□□ -0.3
ARPC3-208ENST00000548878 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
ARPC3-208ENST00000548878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
ARPC3-208ENST00000548878 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
ARPC3-208ENST00000548878 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
ARPC3-208ENST00000548878 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
ARPC3-208ENST00000548878 MICALL2Q8IY33 904 aa13.06□□□□□ -0.32
ARPC3-208ENST00000548878 EMP3P54852 163 aa13.05□□□□□ -0.32
ARPC3-208ENST00000548878 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
ARPC3-208ENST00000548878 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
ARPC3-208ENST00000548878 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
ARPC3-208ENST00000548878 NLRP6P59044 892 aa13.04□□□□□ -0.32
ARPC3-208ENST00000548878 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
ARPC3-208ENST00000548878 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
ARPC3-208ENST00000548878 STK24Q9Y6E0 443 aa13□□□□□ -0.33
ARPC3-208ENST00000548878 PKD2Q13563 968 aa12.99□□□□□ -0.33
ARPC3-208ENST00000548878 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
ARPC3-208ENST00000548878 STK25O00506 426 aa12.97□□□□□ -0.33
ARPC3-208ENST00000548878 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
ARPC3-208ENST00000548878 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
ARPC3-208ENST00000548878 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
ARPC3-208ENST00000548878 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
ARPC3-208ENST00000548878 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
ARPC3-208ENST00000548878 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms