RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 NUBP1P53384 320 aa14.63□□□□□ -0.07
LINC02404-201ENST00000546710 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
LINC02404-201ENST00000546710 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
LINC02404-201ENST00000546710 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
LINC02404-201ENST00000546710 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
LINC02404-201ENST00000546710 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
LINC02404-201ENST00000546710 FAM212AQ96EL1 285 aa14.5□□□□□ -0.09
LINC02404-201ENST00000546710 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
LINC02404-201ENST00000546710 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
LINC02404-201ENST00000546710 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
LINC02404-201ENST00000546710 SPOCK2Q92563 424 aa14.42□□□□□ -0.1
LINC02404-201ENST00000546710 MAP3K13O43283 966 aa14.4□□□□□ -0.1
LINC02404-201ENST00000546710 GSE1Q14687 1217 aa14.34□□□□□ -0.11
LINC02404-201ENST00000546710 PYGBP11216 843 aa14.32□□□□□ -0.12
LINC02404-201ENST00000546710 OTUD5Q96G74 571 aa14.3□□□□□ -0.12
LINC02404-201ENST00000546710 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
LINC02404-201ENST00000546710 PLSCR2Q9NRY7 297 aa14.29□□□□□ -0.12
LINC02404-201ENST00000546710 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
LINC02404-201ENST00000546710 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
LINC02404-201ENST00000546710 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
LINC02404-201ENST00000546710 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
LINC02404-201ENST00000546710 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
LINC02404-201ENST00000546710 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
LINC02404-201ENST00000546710 ASTLQ6HA08 431 aaPredicted RBP14.22□□□□□ -0.13
LINC02404-201ENST00000546710 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
LINC02404-201ENST00000546710 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
LINC02404-201ENST00000546710 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
LINC02404-201ENST00000546710 TIE1P35590 1138 aa14.18□□□□□ -0.14
LINC02404-201ENST00000546710 SLC39A7Q92504 469 aa14.18□□□□□ -0.14
LINC02404-201ENST00000546710 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
LINC02404-201ENST00000546710 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
LINC02404-201ENST00000546710 C7P10643 843 aa14.16□□□□□ -0.14
LINC02404-201ENST00000546710 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
LINC02404-201ENST00000546710 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
LINC02404-201ENST00000546710 POTEMA6NI47 508 aa14.1□□□□□ -0.15
LINC02404-201ENST00000546710 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
LINC02404-201ENST00000546710 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
LINC02404-201ENST00000546710 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
LINC02404-201ENST00000546710 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
LINC02404-201ENST00000546710 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
LINC02404-201ENST00000546710 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
LINC02404-201ENST00000546710 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
LINC02404-201ENST00000546710 PSEN1P49768 467 aa13.98□□□□□ -0.17
LINC02404-201ENST00000546710 SCUBE2Q9NQ36 999 aa13.98□□□□□ -0.17
LINC02404-201ENST00000546710 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
LINC02404-201ENST00000546710 PCDH10Q9P2E7 1040 aa13.95□□□□□ -0.18
LINC02404-201ENST00000546710 RNF25Q96BH1 459 aaPredicted RBP13.94□□□□□ -0.18
LINC02404-201ENST00000546710 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
LINC02404-201ENST00000546710 PKD2Q13563 968 aa13.93□□□□□ -0.18
LINC02404-201ENST00000546710 IER5LQ5T953 404 aa13.92□□□□□ -0.18
LINC02404-201ENST00000546710 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
LINC02404-201ENST00000546710 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
LINC02404-201ENST00000546710 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
LINC02404-201ENST00000546710 SEC24BO95487 1268 aa13.89□□□□□ -0.19
LINC02404-201ENST00000546710 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
LINC02404-201ENST00000546710 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
LINC02404-201ENST00000546710 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
LINC02404-201ENST00000546710 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
LINC02404-201ENST00000546710 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
LINC02404-201ENST00000546710 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
LINC02404-201ENST00000546710 PLCG2P16885 1265 aa13.8□□□□□ -0.2
LINC02404-201ENST00000546710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
LINC02404-201ENST00000546710 RGL2O15211 777 aa13.79□□□□□ -0.2
LINC02404-201ENST00000546710 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
LINC02404-201ENST00000546710 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
LINC02404-201ENST00000546710 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
LINC02404-201ENST00000546710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC02404-201ENST00000546710 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
LINC02404-201ENST00000546710 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
LINC02404-201ENST00000546710 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
LINC02404-201ENST00000546710 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
LINC02404-201ENST00000546710 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
LINC02404-201ENST00000546710 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
LINC02404-201ENST00000546710 STK25O00506 426 aa13.64□□□□□ -0.23
LINC02404-201ENST00000546710 DPY19L2Q6NUT2 758 aa13.61□□□□□ -0.23
LINC02404-201ENST00000546710 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
LINC02404-201ENST00000546710 SOX12O15370 315 aa13.58□□□□□ -0.24
LINC02404-201ENST00000546710 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
LINC02404-201ENST00000546710 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
LINC02404-201ENST00000546710 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
LINC02404-201ENST00000546710 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
LINC02404-201ENST00000546710 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
LINC02404-201ENST00000546710 BOLA1Q9Y3E2 137 aa13.5□□□□□ -0.25
LINC02404-201ENST00000546710 ST18O60284 1047 aa13.48□□□□□ -0.25
LINC02404-201ENST00000546710 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
LINC02404-201ENST00000546710 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
LINC02404-201ENST00000546710 HS6ST3Q8IZP7 471 aa13.48□□□□□ -0.25
LINC02404-201ENST00000546710 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
LINC02404-201ENST00000546710 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
LINC02404-201ENST00000546710 G3V3G9 751 aa13.47□□□□□ -0.25
LINC02404-201ENST00000546710 NLRP6P59044 892 aa13.47□□□□□ -0.25
LINC02404-201ENST00000546710 SNPHO15079 494 aa13.41□□□□□ -0.26
LINC02404-201ENST00000546710 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
LINC02404-201ENST00000546710 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
LINC02404-201ENST00000546710 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
LINC02404-201ENST00000546710 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
LINC02404-201ENST00000546710 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
LINC02404-201ENST00000546710 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
LINC02404-201ENST00000546710 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
LINC02404-201ENST00000546710 PPP1R37O75864 691 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms