RNA–Protein interactions for RNA: ENST00000546606.1

ZFC3H1-203, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 2

Gene ZFC3H1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-203ENST00000546606 PROM2Q8N271 834 aa12.99□□□□□ -0.33
ZFC3H1-203ENST00000546606 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
ZFC3H1-203ENST00000546606 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
ZFC3H1-203ENST00000546606 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
ZFC3H1-203ENST00000546606 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
ZFC3H1-203ENST00000546606 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
ZFC3H1-203ENST00000546606 MIER1Q8N108 512 aa12.89□□□□□ -0.35
ZFC3H1-203ENST00000546606 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
ZFC3H1-203ENST00000546606 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
ZFC3H1-203ENST00000546606 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
ZFC3H1-203ENST00000546606 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
ZFC3H1-203ENST00000546606 C7P10643 843 aa12.84□□□□□ -0.35
ZFC3H1-203ENST00000546606 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
ZFC3H1-203ENST00000546606 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
ZFC3H1-203ENST00000546606 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
ZFC3H1-203ENST00000546606 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
ZFC3H1-203ENST00000546606 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
ZFC3H1-203ENST00000546606 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
ZFC3H1-203ENST00000546606 MAP3K13O43283 966 aa12.75□□□□□ -0.37
ZFC3H1-203ENST00000546606 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
ZFC3H1-203ENST00000546606 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
ZFC3H1-203ENST00000546606 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
ZFC3H1-203ENST00000546606 FKBP8Q14318 412 aa12.69□□□□□ -0.38
ZFC3H1-203ENST00000546606 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
ZFC3H1-203ENST00000546606 TIE1P35590 1138 aa12.63□□□□□ -0.39
ZFC3H1-203ENST00000546606 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
ZFC3H1-203ENST00000546606 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
ZFC3H1-203ENST00000546606 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
ZFC3H1-203ENST00000546606 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
ZFC3H1-203ENST00000546606 NUBP1P53384 320 aa12.59□□□□□ -0.39
ZFC3H1-203ENST00000546606 SEC24BO95487 1268 aa12.58□□□□□ -0.4
ZFC3H1-203ENST00000546606 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
ZFC3H1-203ENST00000546606 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
ZFC3H1-203ENST00000546606 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
ZFC3H1-203ENST00000546606 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
ZFC3H1-203ENST00000546606 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
ZFC3H1-203ENST00000546606 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
ZFC3H1-203ENST00000546606 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
ZFC3H1-203ENST00000546606 PYGBP11216 843 aa12.43□□□□□ -0.42
ZFC3H1-203ENST00000546606 IER5LQ5T953 404 aa12.43□□□□□ -0.42
ZFC3H1-203ENST00000546606 ST18O60284 1047 aa12.4□□□□□ -0.42
ZFC3H1-203ENST00000546606 PLCG2P16885 1265 aa12.38□□□□□ -0.43
ZFC3H1-203ENST00000546606 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
ZFC3H1-203ENST00000546606 MMRN1Q13201 1228 aa12.37□□□□□ -0.43
ZFC3H1-203ENST00000546606 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
ZFC3H1-203ENST00000546606 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
ZFC3H1-203ENST00000546606 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
ZFC3H1-203ENST00000546606 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
ZFC3H1-203ENST00000546606 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
ZFC3H1-203ENST00000546606 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
ZFC3H1-203ENST00000546606 OCEL1Q9H607 264 aa12.24□□□□□ -0.45
ZFC3H1-203ENST00000546606 GSE1Q14687 1217 aa12.21□□□□□ -0.45
ZFC3H1-203ENST00000546606 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
ZFC3H1-203ENST00000546606 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
ZFC3H1-203ENST00000546606 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
ZFC3H1-203ENST00000546606 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
ZFC3H1-203ENST00000546606 MKRN3Q13064 507 aaKnown RBP12.14□□□□□ -0.47
ZFC3H1-203ENST00000546606 PSEN1P49768 467 aa12.1□□□□□ -0.47
ZFC3H1-203ENST00000546606 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
ZFC3H1-203ENST00000546606 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
ZFC3H1-203ENST00000546606 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
ZFC3H1-203ENST00000546606 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
ZFC3H1-203ENST00000546606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.483e-7■■■■■ 29.6
ZFC3H1-203ENST00000546606 SNPHO15079 494 aa12.05□□□□□ -0.48
ZFC3H1-203ENST00000546606 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
ZFC3H1-203ENST00000546606 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
ZFC3H1-203ENST00000546606 SPOCK2Q92563 424 aa12.04□□□□□ -0.48
ZFC3H1-203ENST00000546606 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
ZFC3H1-203ENST00000546606 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
ZFC3H1-203ENST00000546606 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
ZFC3H1-203ENST00000546606 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
ZFC3H1-203ENST00000546606 CABP2Q9NPB3 220 aa12□□□□□ -0.49
ZFC3H1-203ENST00000546606 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
ZFC3H1-203ENST00000546606 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
ZFC3H1-203ENST00000546606 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
ZFC3H1-203ENST00000546606 G3V3G9 751 aa11.93□□□□□ -0.5
ZFC3H1-203ENST00000546606 EMP3P54852 163 aa11.93□□□□□ -0.5
ZFC3H1-203ENST00000546606 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
ZFC3H1-203ENST00000546606 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
ZFC3H1-203ENST00000546606 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
ZFC3H1-203ENST00000546606 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
ZFC3H1-203ENST00000546606 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
ZFC3H1-203ENST00000546606 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
ZFC3H1-203ENST00000546606 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
ZFC3H1-203ENST00000546606 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
ZFC3H1-203ENST00000546606 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
ZFC3H1-203ENST00000546606 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
ZFC3H1-203ENST00000546606 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
ZFC3H1-203ENST00000546606 ERBB3P21860 1342 aa11.68□□□□□ -0.54
ZFC3H1-203ENST00000546606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
ZFC3H1-203ENST00000546606 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
ZFC3H1-203ENST00000546606 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
ZFC3H1-203ENST00000546606 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
ZFC3H1-203ENST00000546606 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
ZFC3H1-203ENST00000546606 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
ZFC3H1-203ENST00000546606 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
ZFC3H1-203ENST00000546606 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
ZFC3H1-203ENST00000546606 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
ZFC3H1-203ENST00000546606 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
ZFC3H1-203ENST00000546606 SOX12O15370 315 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms