RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	MS4A3	Q96HJ5	214 aa		13.08	□□□□□ -0.32
TAF1D-222	ENST00000546088	METRN	Q9UJH8	293 aa		13.06	□□□□□ -0.32
TAF1D-222	ENST00000546088	SLC39A7	Q92504	469 aa		13.05	□□□□□ -0.32
TAF1D-222	ENST00000546088	ATMIN	O43313	823 aa	Predicted RBP	13.05	□□□□□ -0.32
TAF1D-222	ENST00000546088	C7	P10643	843 aa		13.05	□□□□□ -0.32
TAF1D-222	ENST00000546088	POTEG	Q6S5H5	508 aa		13.03	□□□□□ -0.32
TAF1D-222	ENST00000546088	DCAF8L2	P0C7V8	631 aa		13.01	□□□□□ -0.33
TAF1D-222	ENST00000546088	EHMT2	Q96KQ7	1210 aa		12.99	□□□□□ -0.33
TAF1D-222	ENST00000546088	POTEJ	P0CG39	1038 aa		12.98	□□□□□ -0.33
TAF1D-222	ENST00000546088	MAMSTR	Q6ZN01	415 aa		12.98	□□□□□ -0.33
TAF1D-222	ENST00000546088	PROM2	Q8N271	834 aa		12.95	□□□□□ -0.34
TAF1D-222	ENST00000546088	PCDH10	Q9P2E7	1040 aa		12.95	□□□□□ -0.34
TAF1D-222	ENST00000546088	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.94	□□□□□ -0.34
TAF1D-222	ENST00000546088	CCDC61	Q9Y6R9	512 aa		12.94	□□□□□ -0.34
TAF1D-222	ENST00000546088	ATN1	P54259	1190 aa	Predicted RBP	12.91	□□□□□ -0.34
TAF1D-222	ENST00000546088	KIF12	Q96FN5	646 aa		12.88	□□□□□ -0.35
TAF1D-222	ENST00000546088	SCUBE2	Q9NQ36	999 aa		12.86	□□□□□ -0.35
TAF1D-222	ENST00000546088	LCE2D	Q5TA82	110 aa	Predicted RBP	12.83	□□□□□ -0.36
TAF1D-222	ENST00000546088	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.82	□□□□□ -0.36
TAF1D-222	ENST00000546088	POTEF	A5A3E0	1075 aa		12.8	□□□□□ -0.36
TAF1D-222	ENST00000546088	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.8	□□□□□ -0.36
TAF1D-222	ENST00000546088	TIE1	P35590	1138 aa		12.79	□□□□□ -0.36
TAF1D-222	ENST00000546088	FAM163A	Q96GL9	167 aa	Predicted RBP	12.78	□□□□□ -0.36
TAF1D-222	ENST00000546088	TRPC6	Q9Y210	931 aa		12.78	□□□□□ -0.36
TAF1D-222	ENST00000546088	RB1CC1	Q8TDY2	1594 aa		12.77	□□□□□ -0.36
TAF1D-222	ENST00000546088	MAP3K13	O43283	966 aa		12.77	□□□□□ -0.36
TAF1D-222	ENST00000546088	PLEKHG5	O94827	1062 aa		12.76	□□□□□ -0.37
TAF1D-222	ENST00000546088	NACAD	O15069	1562 aa		12.74	□□□□□ -0.37
TAF1D-222	ENST00000546088	RASEF	Q8IZ41	740 aa		12.73	□□□□□ -0.37
TAF1D-222	ENST00000546088	MIER1	Q8N108	512 aa		12.72	□□□□□ -0.37
TAF1D-222	ENST00000546088	TTLL13P	A6NNM8	815 aa		12.69	□□□□□ -0.38
TAF1D-222	ENST00000546088	COLQ	Q9Y215	455 aa	Predicted RBP	12.67	□□□□□ -0.38
TAF1D-222	ENST00000546088	SEC24B	O95487	1268 aa		12.66	□□□□□ -0.38
TAF1D-222	ENST00000546088	SGIP1	Q9BQI5	828 aa		12.66	□□□□□ -0.38
TAF1D-222	ENST00000546088	IER5L	Q5T953	404 aa		12.64	□□□□□ -0.39
TAF1D-222	ENST00000546088	DCAF1	Q9Y4B6	1507 aa		12.61	□□□□□ -0.39
TAF1D-222	ENST00000546088	MYO15B	Q96JP2	1530 aa		12.61	□□□□□ -0.39
TAF1D-222	ENST00000546088	TRIM35	Q9UPQ4	493 aa		12.6	□□□□□ -0.39
TAF1D-222	ENST00000546088	PCDHB13	Q9Y5F0	798 aa		12.59	□□□□□ -0.39
TAF1D-222	ENST00000546088	PLCD3	Q8N3E9	789 aa		12.57	□□□□□ -0.4
TAF1D-222	ENST00000546088	UNC13A	Q9UPW8	1703 aa		12.56	□□□□□ -0.4
TAF1D-222	ENST00000546088	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.54	□□□□□ -0.4
TAF1D-222	ENST00000546088	NUBP1	P53384	320 aa		12.54	□□□□□ -0.4
TAF1D-222	ENST00000546088	SCRIB	Q14160	1630 aa		12.53	□□□□□ -0.4
TAF1D-222	ENST00000546088	CDAN1	Q8IWY9	1227 aa		12.53	□□□□□ -0.4
TAF1D-222	ENST00000546088	IFNL1	Q8IU54	200 aa		12.51	□□□□□ -0.41
TAF1D-222	ENST00000546088	SLAIN1	Q8ND83	568 aa		12.49	□□□□□ -0.41
TAF1D-222	ENST00000546088	TMEM106C	Q9BVX2	250 aa		12.47	□□□□□ -0.41
TAF1D-222	ENST00000546088	ST18	O60284	1047 aa		12.45	□□□□□ -0.42
TAF1D-222	ENST00000546088	FAM212A	Q96EL1	285 aa		12.45	□□□□□ -0.42
TAF1D-222	ENST00000546088	PLCG2	P16885	1265 aa		12.45	□□□□□ -0.42
TAF1D-222	ENST00000546088	BICRA	Q9NZM4	1560 aa		12.42	□□□□□ -0.42
TAF1D-222	ENST00000546088	IRX5	P78411	483 aa	Predicted RBP	12.42	□□□□□ -0.42
TAF1D-222	ENST00000546088	SHROOM4	Q9ULL8	1493 aa		12.38	□□□□□ -0.43
TAF1D-222	ENST00000546088	OCEL1	Q9H607	264 aa		12.35	□□□□□ -0.43
TAF1D-222	ENST00000546088	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.33	□□□□□ -0.44
TAF1D-222	ENST00000546088	SNPH	O15079	494 aa		12.3	□□□□□ -0.44
TAF1D-222	ENST00000546088	DCAF8	Q5TAQ9	597 aa		12.28	□□□□□ -0.44
TAF1D-222	ENST00000546088	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.28	□□□□□ -0.44
TAF1D-222	ENST00000546088	PYGB	P11216	843 aa		12.26	□□□□□ -0.45
TAF1D-222	ENST00000546088	MMRN1	Q13201	1228 aa		12.25	□□□□□ -0.45
TAF1D-222	ENST00000546088	SPNS2	Q8IVW8	549 aa		12.24	□□□□□ -0.45
TAF1D-222	ENST00000546088	PCDHB8	Q9UN66	801 aa		12.23	□□□□□ -0.45
TAF1D-222	ENST00000546088	FKBP8	Q14318	412 aa		12.2	□□□□□ -0.46
TAF1D-222	ENST00000546088	MARVELD3	Q96A59	401 aa		12.18	□□□□□ -0.46
TAF1D-222	ENST00000546088	PDCD7	Q8N8D1	485 aa	Known RBP	12.17	□□□□□ -0.46
TAF1D-222	ENST00000546088	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.13	□□□□□ -0.47
TAF1D-222	ENST00000546088	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.13	□□□□□ -0.47
TAF1D-222	ENST00000546088	C3orf67	Q6ZVT6	689 aa		12.12	□□□□□ -0.47
TAF1D-222	ENST00000546088	FBXO3	Q9UK99	471 aa		12.12	□□□□□ -0.47
TAF1D-222	ENST00000546088	MKRN3	Q13064	507 aa	Known RBP	12.1	□□□□□ -0.47
TAF1D-222	ENST00000546088	GSE1	Q14687	1217 aa		12.1	□□□□□ -0.47
TAF1D-222	ENST00000546088	GOLGA2	Q08379	1002 aa		12.09	□□□□□ -0.47
TAF1D-222	ENST00000546088	EIF4G1	Q04637	1599 aa	Known RBP	12.09	□□□□□ -0.47
TAF1D-222	ENST00000546088	EMP3	P54852	163 aa		12.08	□□□□□ -0.48
TAF1D-222	ENST00000546088	CHRM1	P11229	460 aa	Predicted RBP	12.06	□□□□□ -0.48
TAF1D-222	ENST00000546088	CC2D2A	Q9P2K1	1620 aa		12.05	□□□□□ -0.48
TAF1D-222	ENST00000546088	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.04	□□□□□ -0.48	1e-8	■■■□□ 17.3
TAF1D-222	ENST00000546088	CECR2	Q9BXF3	1484 aa		12.04	□□□□□ -0.48
TAF1D-222	ENST00000546088	HS3ST6	Q96QI5	342 aa		12.02	□□□□□ -0.49
TAF1D-222	ENST00000546088	PSEN1	P49768	467 aa		12.01	□□□□□ -0.49
TAF1D-222	ENST00000546088	KRTAP3-3	Q9BYR6	98 aa		12.01	□□□□□ -0.49
TAF1D-222	ENST00000546088	KRTAP3-2	Q9BYR7	98 aa		12.01	□□□□□ -0.49
TAF1D-222	ENST00000546088	POTEB3	A0JP26	581 aa		12	□□□□□ -0.49
TAF1D-222	ENST00000546088	POTEB	Q6S5H4	581 aa		12	□□□□□ -0.49
TAF1D-222	ENST00000546088	ILDR1	Q86SU0	546 aa	Predicted RBP	12	□□□□□ -0.49
TAF1D-222	ENST00000546088	KLHL34	Q8N239	644 aa		12	□□□□□ -0.49
TAF1D-222	ENST00000546088	FAM205C	A6NFA0	338 aa		11.98	□□□□□ -0.49
TAF1D-222	ENST00000546088	VASP	P50552	380 aa	Predicted RBP	11.97	□□□□□ -0.49
TAF1D-222	ENST00000546088	PDAP1	Q13442	181 aa	Known RBP	11.93	□□□□□ -0.5
TAF1D-222	ENST00000546088	SMARCA4	P51532	1647 aa		11.92	□□□□□ -0.5
TAF1D-222	ENST00000546088	DPY19L2	Q6NUT2	758 aa		11.91	□□□□□ -0.5
TAF1D-222	ENST00000546088	MROH2B	Q7Z745	1585 aa		11.9	□□□□□ -0.51
TAF1D-222	ENST00000546088	HOXB3	P14651	431 aa	Predicted RBP	11.89	□□□□□ -0.51
TAF1D-222	ENST00000546088	BOLA1	Q9Y3E2	137 aa		11.89	□□□□□ -0.51
TAF1D-222	ENST00000546088	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.88	□□□□□ -0.51
TAF1D-222	ENST00000546088		G3V3G9	751 aa		11.87	□□□□□ -0.51
TAF1D-222	ENST00000546088	CABP2	Q9NPB3	220 aa		11.86	□□□□□ -0.51
TAF1D-222	ENST00000546088	HOXB1	P14653	301 aa	Predicted RBP	11.84	□□□□□ -0.51
TAF1D-222	ENST00000546088	ATAD2B	Q9ULI0	1458 aa		11.83	□□□□□ -0.52

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