RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 FBLN2P98095 1184 aa7.49□□□□□ -1.21
UBE4A-203ENST00000545354 MKRN4PQ13434 485 aaPredicted RBP7.49□□□□□ -1.21
UBE4A-203ENST00000545354 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
UBE4A-203ENST00000545354 FGD1P98174 961 aa7.48□□□□□ -1.21
UBE4A-203ENST00000545354 OSCARQ8IYS5 282 aa7.46□□□□□ -1.21
UBE4A-203ENST00000545354 HSP90B1P14625 803 aaKnown RBP7.46□□□□□ -1.22
UBE4A-203ENST00000545354 BCCIPQ9P287 314 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBE4A-203ENST00000545354 AKT1S1Q96B36 256 aa7.4□□□□□ -1.23
UBE4A-203ENST00000545354 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.23
UBE4A-203ENST00000545354 SPDYE2BA6NHP3 402 aa7.39□□□□□ -1.23
UBE4A-203ENST00000545354 SPDYE6P0CI01 402 aa7.39□□□□□ -1.23
UBE4A-203ENST00000545354 SPDYE2Q495Y8 402 aa7.39□□□□□ -1.23
UBE4A-203ENST00000545354 RSPH4AQ5TD94 716 aa7.36□□□□□ -1.23
UBE4A-203ENST00000545354 TMEM132AQ24JP5 1023 aa7.35□□□□□ -1.23
UBE4A-203ENST00000545354 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
UBE4A-203ENST00000545354 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
UBE4A-203ENST00000545354 BCL11BQ9C0K0 894 aaPredicted RBP7.33□□□□□ -1.24
UBE4A-203ENST00000545354 REM2Q8IYK8 340 aaPredicted RBP7.33□□□□□ -1.24
UBE4A-203ENST00000545354 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
UBE4A-203ENST00000545354 ZNF692Q9BU19 519 aaPredicted RBP7.32□□□□□ -1.24
UBE4A-203ENST00000545354 SSUH2Q9Y2M2 353 aa7.32□□□□□ -1.24
UBE4A-203ENST00000545354 PLCB2Q00722 1185 aa7.31□□□□□ -1.24
UBE4A-203ENST00000545354 AAMPQ13685 434 aa7.31□□□□□ -1.24
UBE4A-203ENST00000545354 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
UBE4A-203ENST00000545354 ARID3AQ99856 593 aa7.31□□□□□ -1.24
UBE4A-203ENST00000545354 HAP1P54257 671 aaPredicted RBP7.3□□□□□ -1.24
UBE4A-203ENST00000545354 NAP1L5Q96NT1 182 aaPredicted RBP7.3□□□□□ -1.24
UBE4A-203ENST00000545354 SHROOM4Q9ULL8 1493 aa7.3□□□□□ -1.24
UBE4A-203ENST00000545354 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
UBE4A-203ENST00000545354 CHRDL2Q6WN34 429 aa7.27□□□□□ -1.25
UBE4A-203ENST00000545354 LOC105371045A0A1W2PR82 267 aa7.26□□□□□ -1.25
UBE4A-203ENST00000545354 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
UBE4A-203ENST00000545354 DHX37Q8IY37 1157 aaKnown RBP7.24□□□□□ -1.25
UBE4A-203ENST00000545354 PITPNM1O00562 1244 aa7.23□□□□□ -1.25
UBE4A-203ENST00000545354 POTEHQ6S545 545 aa7.22□□□□□ -1.25
UBE4A-203ENST00000545354 SPDYE4A6NLX3 237 aa7.22□□□□□ -1.25
UBE4A-203ENST00000545354 RBM10P98175 930 aaKnown RBP7.22□□□□□ -1.25
UBE4A-203ENST00000545354 PABPN1Q86U42 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE4A-203ENST00000545354 ZMYND15Q9H091 742 aa7.21□□□□□ -1.25
UBE4A-203ENST00000545354 SPDYE1Q8NFV5 336 aaPredicted RBP7.2□□□□□ -1.26
UBE4A-203ENST00000545354 POLR3GLQ9BT43 218 aa7.2□□□□□ -1.26
UBE4A-203ENST00000545354 CCDC9Q9Y3X0 531 aaKnown RBP7.19□□□□□ -1.26
UBE4A-203ENST00000545354 DEKP35659 375 aaKnown RBP7.18□□□□□ -1.26
UBE4A-203ENST00000545354 CCDC180Q9P1Z9 1646 aa7.17□□□□□ -1.26
UBE4A-203ENST00000545354 A0A0U1RQG5 324 aaPredicted RBP7.16□□□□□ -1.26
UBE4A-203ENST00000545354 VSIG10Q8N0Z9 540 aa7.16□□□□□ -1.26
UBE4A-203ENST00000545354 CCER1Q8TC90 406 aaPredicted RBP7.16□□□□□ -1.26
UBE4A-203ENST00000545354 PUS7Q96PZ0 661 aaKnown RBP7.16□□□□□ -1.26
UBE4A-203ENST00000545354 FXR2P51116 673 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBE4A-203ENST00000545354 CCDC136Q96JN2 1154 aa7.15□□□□□ -1.26
UBE4A-203ENST00000545354 CLEC11AQ9Y240 323 aa7.15□□□□□ -1.26
UBE4A-203ENST00000545354 CLSTN1O94985 981 aa7.15□□□□□ -1.27
UBE4A-203ENST00000545354 PCGF6Q9BYE7 350 aa7.15□□□□□ -1.27
UBE4A-203ENST00000545354 NCLP19338 710 aaKnown RBP7.14□□□□□ -1.27
UBE4A-203ENST00000545354 PIP4P2Q8N4L2 257 aa7.14□□□□□ -1.27
UBE4A-203ENST00000545354 TSHZ2Q9NRE2 1034 aa7.13□□□□□ -1.27
UBE4A-203ENST00000545354 PAXIP1Q6ZW49 1069 aaPredicted RBP7.12□□□□□ -1.27
UBE4A-203ENST00000545354 TICAM2Q86XR7 235 aa7.12□□□□□ -1.27
UBE4A-203ENST00000545354 PROM2Q8N271 834 aa7.12□□□□□ -1.27
UBE4A-203ENST00000545354 IPO4Q8TEX9 1081 aaKnown RBP7.11□□□□□ -1.27
UBE4A-203ENST00000545354 PTMSP20962 102 aa7.1□□□□□ -1.27
UBE4A-203ENST00000545354 TEX2Q8IWB9 1127 aa7.1□□□□□ -1.27
UBE4A-203ENST00000545354 SUPT5HO00267 1087 aaKnown RBP7.09□□□□□ -1.27
UBE4A-203ENST00000545354 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.09□□□□□ -1.28
UBE4A-203ENST00000545354 ARID4BQ4LE39 1312 aaPredicted RBP7.08□□□□□ -1.28
UBE4A-203ENST00000545354 PRR29P0C7W0 189 aa7.08□□□□□ -1.28
UBE4A-203ENST00000545354 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
UBE4A-203ENST00000545354 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
UBE4A-203ENST00000545354 STAG3Q9UJ98 1225 aa7.08□□□□□ -1.28
UBE4A-203ENST00000545354 NAP1L2Q9ULW6 460 aaPredicted RBP7.08□□□□□ -1.28
UBE4A-203ENST00000545354 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBE4A-203ENST00000545354 NEFMP07197 916 aa7.07□□□□□ -1.28
UBE4A-203ENST00000545354 UBTFP17480 764 aaKnown RBP7.06□□□□□ -1.28
UBE4A-203ENST00000545354 FKBP8Q14318 412 aa7.06□□□□□ -1.28
UBE4A-203ENST00000545354 PTMAP06454 111 aaKnown RBP7.06□□□□□ -1.28
UBE4A-203ENST00000545354 CHRM1P11229 460 aaPredicted RBP7.06□□□□□ -1.28
UBE4A-203ENST00000545354 SETQ01105 290 aaPredicted RBP7.05□□□□□ -1.28
UBE4A-203ENST00000545354 PRKAR2AP13861 404 aaKnown RBP7.04□□□□□ -1.28
UBE4A-203ENST00000545354 CNGB1Q14028 1251 aaPredicted RBP7.04□□□□□ -1.28
UBE4A-203ENST00000545354 PSMD1Q99460 953 aa7.04□□□□□ -1.28
UBE4A-203ENST00000545354 FTSJ3Q8IY81 847 aaKnown RBP7.04□□□□□ -1.28
UBE4A-203ENST00000545354 FANCIQ9NVI1 1328 aa7.04□□□□□ -1.28
UBE4A-203ENST00000545354 RRP9O43818 475 aaKnown RBP7.03□□□□□ -1.28
UBE4A-203ENST00000545354 ANP32BQ92688 251 aaKnown RBP7.03□□□□□ -1.28
UBE4A-203ENST00000545354 DCAF1Q9Y4B6 1507 aa7.02□□□□□ -1.29
UBE4A-203ENST00000545354 RB1CC1Q8TDY2 1594 aa7.02□□□□□ -1.29
UBE4A-203ENST00000545354 MCCP23508 829 aa7.01□□□□□ -1.29
UBE4A-203ENST00000545354 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.01□□□□□ -1.29
UBE4A-203ENST00000545354 VGFO15240 615 aaPredicted RBP7.01□□□□□ -1.29
UBE4A-203ENST00000545354 CHADLQ6NUI6 762 aa7.01□□□□□ -1.29
UBE4A-203ENST00000545354 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
UBE4A-203ENST00000545354 PLCD4Q9BRC7 762 aa7□□□□□ -1.29
UBE4A-203ENST00000545354 IGSF3O75054 1194 aa6.99□□□□□ -1.29
UBE4A-203ENST00000545354 C11orf95C9JLR9 678 aaPredicted RBP6.98□□□□□ -1.29
UBE4A-203ENST00000545354 ZBTB7CA1YPR0 619 aa6.97□□□□□ -1.29
UBE4A-203ENST00000545354 CLGNO14967 610 aa6.97□□□□□ -1.29
UBE4A-203ENST00000545354 ZFP91Q96JP5 570 aaPredicted RBP6.97□□□□□ -1.29
UBE4A-203ENST00000545354 CREBZFQ9NS37 354 aa6.97□□□□□ -1.29
UBE4A-203ENST00000545354 GRIPAP1Q4V328 841 aa6.96□□□□□ -1.3
UBE4A-203ENST00000545354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms