RNA–Protein interactions for RNA: ENST00000544693.5

NPIPB4-220, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-220ENST00000544693 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
NPIPB4-220ENST00000544693 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
NPIPB4-220ENST00000544693 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
NPIPB4-220ENST00000544693 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
NPIPB4-220ENST00000544693 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
NPIPB4-220ENST00000544693 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
NPIPB4-220ENST00000544693 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
NPIPB4-220ENST00000544693 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-220ENST00000544693 NESP48681 1621 aa10.84□□□□□ -0.67
NPIPB4-220ENST00000544693 CUX2O14529 1486 aa10.82□□□□□ -0.68
NPIPB4-220ENST00000544693 CFTRP13569 1480 aa10.82□□□□□ -0.68
NPIPB4-220ENST00000544693 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
NPIPB4-220ENST00000544693 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
NPIPB4-220ENST00000544693 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
NPIPB4-220ENST00000544693 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
NPIPB4-220ENST00000544693 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
NPIPB4-220ENST00000544693 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
NPIPB4-220ENST00000544693 WDR62O43379 1518 aa10.73□□□□□ -0.69
NPIPB4-220ENST00000544693 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-220ENST00000544693 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
NPIPB4-220ENST00000544693 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-220ENST00000544693 CLCN6P51797 869 aa10.62□□□□□ -0.71
NPIPB4-220ENST00000544693 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-220ENST00000544693 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
NPIPB4-220ENST00000544693 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-220ENST00000544693 BIVM-ERCC5R4GMW8 1640 aa10.53□□□□□ -0.72
NPIPB4-220ENST00000544693 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
NPIPB4-220ENST00000544693 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
NPIPB4-220ENST00000544693 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
NPIPB4-220ENST00000544693 CUX1P39880 1505 aa10.49□□□□□ -0.73
NPIPB4-220ENST00000544693 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
NPIPB4-220ENST00000544693 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
NPIPB4-220ENST00000544693 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
NPIPB4-220ENST00000544693 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
NPIPB4-220ENST00000544693 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
NPIPB4-220ENST00000544693 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-220ENST00000544693 SOGA1O94964 1423 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 CREBZFQ9NS37 354 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
NPIPB4-220ENST00000544693 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
NPIPB4-220ENST00000544693 CHD1O14646 1710 aa10.38□□□□□ -0.75
NPIPB4-220ENST00000544693 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
NPIPB4-220ENST00000544693 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
NPIPB4-220ENST00000544693 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 GAPVD1Q14C86 1478 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 POTEMA6NI47 508 aa10.34□□□□□ -0.75
NPIPB4-220ENST00000544693 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.759e-14■■■□□ 18.6
NPIPB4-220ENST00000544693 ERICH3Q5RHP9 1530 aa10.33□□□□□ -0.76
NPIPB4-220ENST00000544693 CUL7Q14999 1698 aa10.31□□□□□ -0.76
NPIPB4-220ENST00000544693 DNAJC5Q9H3Z4 198 aa10.31□□□□□ -0.76
NPIPB4-220ENST00000544693 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
NPIPB4-220ENST00000544693 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
NPIPB4-220ENST00000544693 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
NPIPB4-220ENST00000544693 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
NPIPB4-220ENST00000544693 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
NPIPB4-220ENST00000544693 CHMP7Q8WUX9 453 aaPredicted RBP10.24□□□□□ -0.77
NPIPB4-220ENST00000544693 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
NPIPB4-220ENST00000544693 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
NPIPB4-220ENST00000544693 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
NPIPB4-220ENST00000544693 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
NPIPB4-220ENST00000544693 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-220ENST00000544693 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
NPIPB4-220ENST00000544693 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
NPIPB4-220ENST00000544693 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
NPIPB4-220ENST00000544693 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
NPIPB4-220ENST00000544693 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
NPIPB4-220ENST00000544693 EEA1Q15075 1411 aa10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 ATMINO43313 823 aaPredicted RBP10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
NPIPB4-220ENST00000544693 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
NPIPB4-220ENST00000544693 NUP160Q12769 1436 aa10.15□□□□□ -0.79
NPIPB4-220ENST00000544693 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 RUSC2Q8N2Y8 1516 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPIPB4-220ENST00000544693 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
NPIPB4-220ENST00000544693 C7P10643 843 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 IGF1RP08069 1367 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms