RNA–Protein interactions for RNA: ENST00000544392.5

CACUL1-207, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-207ENST00000544392 NUBP1P53384 320 aa15.69■□□□□ 0.1
CACUL1-207ENST00000544392 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACUL1-207ENST00000544392 PKD2Q13563 968 aa15.68■□□□□ 0.1
CACUL1-207ENST00000544392 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
CACUL1-207ENST00000544392 RASEFQ8IZ41 740 aa15.61■□□□□ 0.09
CACUL1-207ENST00000544392 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
CACUL1-207ENST00000544392 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
CACUL1-207ENST00000544392 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
CACUL1-207ENST00000544392 GSE1Q14687 1217 aa15.56■□□□□ 0.08
CACUL1-207ENST00000544392 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
CACUL1-207ENST00000544392 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
CACUL1-207ENST00000544392 TSPYL2Q9H2G4 693 aaPredicted RBP15.51■□□□□ 0.07
CACUL1-207ENST00000544392 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
CACUL1-207ENST00000544392 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
CACUL1-207ENST00000544392 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
CACUL1-207ENST00000544392 RGL2O15211 777 aa15.41■□□□□ 0.06
CACUL1-207ENST00000544392 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
CACUL1-207ENST00000544392 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
CACUL1-207ENST00000544392 PYGBP11216 843 aa15.39■□□□□ 0.05
CACUL1-207ENST00000544392 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
CACUL1-207ENST00000544392 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
CACUL1-207ENST00000544392 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
CACUL1-207ENST00000544392 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
CACUL1-207ENST00000544392 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
CACUL1-207ENST00000544392 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
CACUL1-207ENST00000544392 CHRM1P11229 460 aaPredicted RBP15.28■□□□□ 0.04
CACUL1-207ENST00000544392 C19orf67A6NJJ6 358 aa15.27■□□□□ 0.04
CACUL1-207ENST00000544392 HAX1O00165 279 aa15.23■□□□□ 0.03
CACUL1-207ENST00000544392 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
CACUL1-207ENST00000544392 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
CACUL1-207ENST00000544392 POTEHQ6S545 545 aa15.2■□□□□ 0.02
CACUL1-207ENST00000544392 PHF12Q96QT6 1004 aa15.2■□□□□ 0.02
CACUL1-207ENST00000544392 WIZO95785 1651 aa15.19■□□□□ 0.02
CACUL1-207ENST00000544392 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
CACUL1-207ENST00000544392 MAP3K13O43283 966 aa15.16■□□□□ 0.02
CACUL1-207ENST00000544392 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
CACUL1-207ENST00000544392 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
CACUL1-207ENST00000544392 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
CACUL1-207ENST00000544392 PCDHB8Q9UN66 801 aa15.14■□□□□ 0.01
CACUL1-207ENST00000544392 PCDHB13Q9Y5F0 798 aa15.14■□□□□ 0.01
CACUL1-207ENST00000544392 EVX2Q03828 476 aa15.13■□□□□ 0.01
CACUL1-207ENST00000544392 ZNF467Q7Z7K2 595 aaPredicted RBP15.13■□□□□ 0.01
CACUL1-207ENST00000544392 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
CACUL1-207ENST00000544392 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
CACUL1-207ENST00000544392 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
CACUL1-207ENST00000544392 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
CACUL1-207ENST00000544392 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
CACUL1-207ENST00000544392 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
CACUL1-207ENST00000544392 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
CACUL1-207ENST00000544392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
CACUL1-207ENST00000544392 ZFP91Q96JP5 570 aaPredicted RBP15.06■□□□□ 0
CACUL1-207ENST00000544392 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
CACUL1-207ENST00000544392 NCAPD3P42695 1498 aa15.06■□□□□ 0
CACUL1-207ENST00000544392 STK25O00506 426 aa15.04■□□□□ -0
CACUL1-207ENST00000544392 HS6ST3Q8IZP7 471 aa15.03■□□□□ -0
CACUL1-207ENST00000544392 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
CACUL1-207ENST00000544392 PDAP1Q13442 181 aaKnown RBP15.01□□□□□ -0.01
CACUL1-207ENST00000544392 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
CACUL1-207ENST00000544392 HMGXB3Q12766 1538 aa15□□□□□ -0.01
CACUL1-207ENST00000544392 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
CACUL1-207ENST00000544392 STK24Q9Y6E0 443 aa14.99□□□□□ -0.01
CACUL1-207ENST00000544392 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
CACUL1-207ENST00000544392 PSEN1P49768 467 aa14.98□□□□□ -0.01
CACUL1-207ENST00000544392 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.94□□□□□ -0.02
CACUL1-207ENST00000544392 TRPC6Q9Y210 931 aa14.94□□□□□ -0.02
CACUL1-207ENST00000544392 GALR2O43603 387 aaPredicted RBP14.93□□□□□ -0.02
CACUL1-207ENST00000544392 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
CACUL1-207ENST00000544392 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
CACUL1-207ENST00000544392 PAXIP1Q6ZW49 1069 aaPredicted RBP14.87□□□□□ -0.03
CACUL1-207ENST00000544392 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
CACUL1-207ENST00000544392 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
CACUL1-207ENST00000544392 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
CACUL1-207ENST00000544392 CLCN6P51797 869 aa14.84□□□□□ -0.03
CACUL1-207ENST00000544392 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
CACUL1-207ENST00000544392 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
CACUL1-207ENST00000544392 GABBR2O75899 941 aa14.82□□□□□ -0.04
CACUL1-207ENST00000544392 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
CACUL1-207ENST00000544392 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
CACUL1-207ENST00000544392 TIE1P35590 1138 aa14.79□□□□□ -0.04
CACUL1-207ENST00000544392 BMP2KQ9NSY1 1161 aaPredicted RBP14.78□□□□□ -0.04
CACUL1-207ENST00000544392 TTLL13PA6NNM8 815 aa14.77□□□□□ -0.05
CACUL1-207ENST00000544392 EFCAB3Q8N7B9 438 aa14.77□□□□□ -0.05
CACUL1-207ENST00000544392 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
CACUL1-207ENST00000544392 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
CACUL1-207ENST00000544392 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
CACUL1-207ENST00000544392 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
CACUL1-207ENST00000544392 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
CACUL1-207ENST00000544392 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
CACUL1-207ENST00000544392 CFTRP13569 1480 aa14.69□□□□□ -0.06
CACUL1-207ENST00000544392 MFRPQ9BY79 579 aa14.68□□□□□ -0.06
CACUL1-207ENST00000544392 ATN1P54259 1190 aaPredicted RBP14.67□□□□□ -0.06
CACUL1-207ENST00000544392 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
CACUL1-207ENST00000544392 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
CACUL1-207ENST00000544392 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
CACUL1-207ENST00000544392 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
CACUL1-207ENST00000544392 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
CACUL1-207ENST00000544392 SOX12O15370 315 aa14.64□□□□□ -0.07
CACUL1-207ENST00000544392 RYDENQ9NUL5 291 aaKnown RBP14.64□□□□□ -0.07
CACUL1-207ENST00000544392 ASTLQ6HA08 431 aaPredicted RBP14.63□□□□□ -0.07
CACUL1-207ENST00000544392 EEA1Q15075 1411 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms