RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
AC053513.1-201ENST00000543604 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
AC053513.1-201ENST00000543604 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
AC053513.1-201ENST00000543604 PROM2Q8N271 834 aa15.59■□□□□ 0.09
AC053513.1-201ENST00000543604 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
AC053513.1-201ENST00000543604 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
AC053513.1-201ENST00000543604 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
AC053513.1-201ENST00000543604 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
AC053513.1-201ENST00000543604 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
AC053513.1-201ENST00000543604 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
AC053513.1-201ENST00000543604 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
AC053513.1-201ENST00000543604 HAX1O00165 279 aa15.39■□□□□ 0.05
AC053513.1-201ENST00000543604 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
AC053513.1-201ENST00000543604 WDR62O43379 1518 aa15.38■□□□□ 0.05
AC053513.1-201ENST00000543604 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
AC053513.1-201ENST00000543604 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
AC053513.1-201ENST00000543604 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
AC053513.1-201ENST00000543604 EVX2Q03828 476 aa15.27■□□□□ 0.04
AC053513.1-201ENST00000543604 CFTRP13569 1480 aa15.23■□□□□ 0.03
AC053513.1-201ENST00000543604 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
AC053513.1-201ENST00000543604 WIZO95785 1651 aa15.2■□□□□ 0.02
AC053513.1-201ENST00000543604 MIER1Q8N108 512 aa15.18■□□□□ 0.02
AC053513.1-201ENST00000543604 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
AC053513.1-201ENST00000543604 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
AC053513.1-201ENST00000543604 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
AC053513.1-201ENST00000543604 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
AC053513.1-201ENST00000543604 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
AC053513.1-201ENST00000543604 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
AC053513.1-201ENST00000543604 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
AC053513.1-201ENST00000543604 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0
AC053513.1-201ENST00000543604 PLEKHG5O94827 1062 aa15.07■□□□□ 0
AC053513.1-201ENST00000543604 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
AC053513.1-201ENST00000543604 IFT140Q96RY7 1462 aa15.05■□□□□ -0
AC053513.1-201ENST00000543604 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
AC053513.1-201ENST00000543604 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
AC053513.1-201ENST00000543604 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
AC053513.1-201ENST00000543604 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
AC053513.1-201ENST00000543604 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
AC053513.1-201ENST00000543604 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
AC053513.1-201ENST00000543604 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
AC053513.1-201ENST00000543604 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
AC053513.1-201ENST00000543604 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
AC053513.1-201ENST00000543604 TOPBP1Q92547 1522 aa14.93□□□□□ -0.02
AC053513.1-201ENST00000543604 GABBR2O75899 941 aa14.92□□□□□ -0.02
AC053513.1-201ENST00000543604 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
AC053513.1-201ENST00000543604 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
AC053513.1-201ENST00000543604 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
AC053513.1-201ENST00000543604 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
AC053513.1-201ENST00000543604 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
AC053513.1-201ENST00000543604 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.03
AC053513.1-201ENST00000543604 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
AC053513.1-201ENST00000543604 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
AC053513.1-201ENST00000543604 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
AC053513.1-201ENST00000543604 PRDM2Q13029 1718 aa14.84□□□□□ -0.03
AC053513.1-201ENST00000543604 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
AC053513.1-201ENST00000543604 PHF12Q96QT6 1004 aa14.83□□□□□ -0.04
AC053513.1-201ENST00000543604 NUBP1P53384 320 aa14.82□□□□□ -0.04
AC053513.1-201ENST00000543604 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
AC053513.1-201ENST00000543604 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
AC053513.1-201ENST00000543604 POLA1P09884 1462 aaPredicted RBP14.77□□□□□ -0.04
AC053513.1-201ENST00000543604 CHMP7Q8WUX9 453 aaPredicted RBP14.77□□□□□ -0.05
AC053513.1-201ENST00000543604 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
AC053513.1-201ENST00000543604 SOGA1O94964 1423 aa14.75□□□□□ -0.05
AC053513.1-201ENST00000543604 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
AC053513.1-201ENST00000543604 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
AC053513.1-201ENST00000543604 CHD1O14646 1710 aa14.73□□□□□ -0.05
AC053513.1-201ENST00000543604 CLCN6P51797 869 aa14.73□□□□□ -0.05
AC053513.1-201ENST00000543604 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
AC053513.1-201ENST00000543604 GALR2O43603 387 aaPredicted RBP14.71□□□□□ -0.05
AC053513.1-201ENST00000543604 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
AC053513.1-201ENST00000543604 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
AC053513.1-201ENST00000543604 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
AC053513.1-201ENST00000543604 MAGI1Q96QZ7 1491 aaPredicted RBP14.67□□□□□ -0.06
AC053513.1-201ENST00000543604 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
AC053513.1-201ENST00000543604 WDR97A6NE52 1622 aa14.65□□□□□ -0.06
AC053513.1-201ENST00000543604 CLASP1Q7Z460 1538 aa14.65□□□□□ -0.06
AC053513.1-201ENST00000543604 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
AC053513.1-201ENST00000543604 KIF12Q96FN5 646 aa14.64□□□□□ -0.07
AC053513.1-201ENST00000543604 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
AC053513.1-201ENST00000543604 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
AC053513.1-201ENST00000543604 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
AC053513.1-201ENST00000543604 SYNJ2O15056 1496 aa14.62□□□□□ -0.07
AC053513.1-201ENST00000543604 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
AC053513.1-201ENST00000543604 MAP3K13O43283 966 aa14.6□□□□□ -0.07
AC053513.1-201ENST00000543604 DCBLD2Q96PD2 775 aa14.6□□□□□ -0.07
AC053513.1-201ENST00000543604 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
AC053513.1-201ENST00000543604 CUX1P39880 1505 aa14.54□□□□□ -0.08
AC053513.1-201ENST00000543604 PYGBP11216 843 aa14.53□□□□□ -0.08
AC053513.1-201ENST00000543604 GSE1Q14687 1217 aa14.52□□□□□ -0.09
AC053513.1-201ENST00000543604 TRPC6Q9Y210 931 aa14.5□□□□□ -0.09
AC053513.1-201ENST00000543604 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
AC053513.1-201ENST00000543604 CIZ1Q9ULV3 898 aaPredicted RBP14.48□□□□□ -0.09
AC053513.1-201ENST00000543604 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.09
AC053513.1-201ENST00000543604 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
AC053513.1-201ENST00000543604 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
AC053513.1-201ENST00000543604 GRIN2AQ12879 1464 aa14.43□□□□□ -0.1
AC053513.1-201ENST00000543604 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
AC053513.1-201ENST00000543604 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
AC053513.1-201ENST00000543604 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
AC053513.1-201ENST00000543604 NUP160Q12769 1436 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms