RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
MRPL48-212ENST00000543374 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
MRPL48-212ENST00000543374 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
MRPL48-212ENST00000543374 KIF12Q96FN5 646 aa15.56■□□□□ 0.08
MRPL48-212ENST00000543374 NUBP1P53384 320 aa15.52■□□□□ 0.08
MRPL48-212ENST00000543374 ASTLQ6HA08 431 aaPredicted RBP15.51■□□□□ 0.07
MRPL48-212ENST00000543374 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
MRPL48-212ENST00000543374 SGIP1Q9BQI5 828 aa15.48■□□□□ 0.07
MRPL48-212ENST00000543374 MAP3K13O43283 966 aa15.46■□□□□ 0.07
MRPL48-212ENST00000543374 ATMINO43313 823 aaPredicted RBP15.45■□□□□ 0.06
MRPL48-212ENST00000543374 SLC39A7Q92504 469 aa15.44■□□□□ 0.06
MRPL48-212ENST00000543374 C7P10643 843 aa15.43■□□□□ 0.06
MRPL48-212ENST00000543374 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
MRPL48-212ENST00000543374 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
MRPL48-212ENST00000543374 TIE1P35590 1138 aa15.39■□□□□ 0.05
MRPL48-212ENST00000543374 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
MRPL48-212ENST00000543374 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
MRPL48-212ENST00000543374 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
MRPL48-212ENST00000543374 METRNQ9UJH8 293 aa15.36■□□□□ 0.05
MRPL48-212ENST00000543374 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
MRPL48-212ENST00000543374 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
MRPL48-212ENST00000543374 GSE1Q14687 1217 aa15.27■□□□□ 0.04
MRPL48-212ENST00000543374 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
MRPL48-212ENST00000543374 POTEB2H3BUK9 544 aa15.25■□□□□ 0.03
MRPL48-212ENST00000543374 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
MRPL48-212ENST00000543374 MAMSTRQ6ZN01 415 aa15.24■□□□□ 0.03
MRPL48-212ENST00000543374 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
MRPL48-212ENST00000543374 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
MRPL48-212ENST00000543374 PYGBP11216 843 aa15.19■□□□□ 0.02
MRPL48-212ENST00000543374 IER5LQ5T953 404 aa15.19■□□□□ 0.02
MRPL48-212ENST00000543374 SEC24BO95487 1268 aa15.16■□□□□ 0.02
MRPL48-212ENST00000543374 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
MRPL48-212ENST00000543374 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
MRPL48-212ENST00000543374 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
MRPL48-212ENST00000543374 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
MRPL48-212ENST00000543374 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
MRPL48-212ENST00000543374 SCUBE2Q9NQ36 999 aa15.11■□□□□ 0.01
MRPL48-212ENST00000543374 ZNF467Q7Z7K2 595 aaPredicted RBP15.1■□□□□ 0.01
MRPL48-212ENST00000543374 POTEFA5A3E0 1075 aa15.05■□□□□ -0
MRPL48-212ENST00000543374 POTEJP0CG39 1038 aa15.05■□□□□ -0
MRPL48-212ENST00000543374 PCDHB8Q9UN66 801 aa15.04■□□□□ -0
MRPL48-212ENST00000543374 COLQQ9Y215 455 aaPredicted RBP15.02■□□□□ -0
MRPL48-212ENST00000543374 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
MRPL48-212ENST00000543374 PLCG2P16885 1265 aa14.99□□□□□ -0.01
MRPL48-212ENST00000543374 OCEL1Q9H607 264 aa14.94□□□□□ -0.02
MRPL48-212ENST00000543374 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
MRPL48-212ENST00000543374 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
MRPL48-212ENST00000543374 IRX5P78411 483 aaPredicted RBP14.92□□□□□ -0.02
MRPL48-212ENST00000543374 PSEN1P49768 467 aa14.89□□□□□ -0.03
MRPL48-212ENST00000543374 MKRN3Q13064 507 aaKnown RBP14.87□□□□□ -0.03
MRPL48-212ENST00000543374 PDAP1Q13442 181 aaKnown RBP14.87□□□□□ -0.03
MRPL48-212ENST00000543374 POTEMA6NI47 508 aa14.77□□□□□ -0.05
MRPL48-212ENST00000543374 FAM163AQ96GL9 167 aaPredicted RBP14.77□□□□□ -0.05
MRPL48-212ENST00000543374 SLAIN1Q8ND83 568 aa14.76□□□□□ -0.05
MRPL48-212ENST00000543374 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
MRPL48-212ENST00000543374 POTEGQ6S5H5 508 aa14.74□□□□□ -0.05
MRPL48-212ENST00000543374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.05
MRPL48-212ENST00000543374 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
MRPL48-212ENST00000543374 PCDH10Q9P2E7 1040 aa14.72□□□□□ -0.05
MRPL48-212ENST00000543374 PDCD7Q8N8D1 485 aaKnown RBP14.7□□□□□ -0.06
MRPL48-212ENST00000543374 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
MRPL48-212ENST00000543374 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
MRPL48-212ENST00000543374 SNPHO15079 494 aa14.64□□□□□ -0.07
MRPL48-212ENST00000543374 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
MRPL48-212ENST00000543374 RIOK3O14730 519 aaKnown RBP14.62□□□□□ -0.07
MRPL48-212ENST00000543374 LCE2DQ5TA82 110 aaPredicted RBP14.61□□□□□ -0.07
MRPL48-212ENST00000543374 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
MRPL48-212ENST00000543374 G3V3G9 751 aa14.6□□□□□ -0.07
MRPL48-212ENST00000543374 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
MRPL48-212ENST00000543374 PLSCR2Q9NRY7 297 aa14.53□□□□□ -0.08
MRPL48-212ENST00000543374 BOLA1Q9Y3E2 137 aa14.52□□□□□ -0.09
MRPL48-212ENST00000543374 ST18O60284 1047 aa14.51□□□□□ -0.09
MRPL48-212ENST00000543374 EFCAB3Q8N7B9 438 aa14.51□□□□□ -0.09
MRPL48-212ENST00000543374 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
MRPL48-212ENST00000543374 SOX12O15370 315 aa14.5□□□□□ -0.09
MRPL48-212ENST00000543374 RNF25Q96BH1 459 aaPredicted RBP14.5□□□□□ -0.09
MRPL48-212ENST00000543374 DPY19L2Q6NUT2 758 aa14.48□□□□□ -0.09
MRPL48-212ENST00000543374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.47□□□□□ -0.09
MRPL48-212ENST00000543374 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
MRPL48-212ENST00000543374 ECM2O94769 699 aaPredicted RBP14.41□□□□□ -0.1
MRPL48-212ENST00000543374 CDAN1Q8IWY9 1227 aa14.36□□□□□ -0.11
MRPL48-212ENST00000543374 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
MRPL48-212ENST00000543374 NLRP6P59044 892 aa14.32□□□□□ -0.12
MRPL48-212ENST00000543374 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
MRPL48-212ENST00000543374 PKD2Q13563 968 aa14.3□□□□□ -0.12
MRPL48-212ENST00000543374 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
MRPL48-212ENST00000543374 STK25O00506 426 aa14.29□□□□□ -0.12
MRPL48-212ENST00000543374 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
MRPL48-212ENST00000543374 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
MRPL48-212ENST00000543374 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
MRPL48-212ENST00000543374 MARVELD3Q96A59 401 aa14.25□□□□□ -0.13
MRPL48-212ENST00000543374 EMP3P54852 163 aa14.24□□□□□ -0.13
MRPL48-212ENST00000543374 ZNF710Q8N1W2 664 aa14.23□□□□□ -0.13
MRPL48-212ENST00000543374 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
MRPL48-212ENST00000543374 RGL2O15211 777 aa14.21□□□□□ -0.13
MRPL48-212ENST00000543374 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
MRPL48-212ENST00000543374 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
MRPL48-212ENST00000543374 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
MRPL48-212ENST00000543374 HOXB1P14653 301 aaPredicted RBP14.14□□□□□ -0.15
MRPL48-212ENST00000543374 ZSWIM6Q9HCJ5 1215 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms