RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
MDM2-228ENST00000542502 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
MDM2-228ENST00000542502 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
MDM2-228ENST00000542502 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
MDM2-228ENST00000542502 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
MDM2-228ENST00000542502 NUBP1P53384 320 aa13.34□□□□□ -0.27
MDM2-228ENST00000542502 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
MDM2-228ENST00000542502 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
MDM2-228ENST00000542502 MAP3K13O43283 966 aa13.3□□□□□ -0.28
MDM2-228ENST00000542502 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
MDM2-228ENST00000542502 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
MDM2-228ENST00000542502 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
MDM2-228ENST00000542502 C7P10643 843 aa13.23□□□□□ -0.29
MDM2-228ENST00000542502 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
MDM2-228ENST00000542502 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
MDM2-228ENST00000542502 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
MDM2-228ENST00000542502 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
MDM2-228ENST00000542502 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
MDM2-228ENST00000542502 TIE1P35590 1138 aa13.2□□□□□ -0.3
MDM2-228ENST00000542502 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
MDM2-228ENST00000542502 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
MDM2-228ENST00000542502 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
MDM2-228ENST00000542502 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
MDM2-228ENST00000542502 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
MDM2-228ENST00000542502 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
MDM2-228ENST00000542502 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
MDM2-228ENST00000542502 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
MDM2-228ENST00000542502 PYGBP11216 843 aa13.06□□□□□ -0.32
MDM2-228ENST00000542502 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
MDM2-228ENST00000542502 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
MDM2-228ENST00000542502 GSE1Q14687 1217 aa13.02□□□□□ -0.33
MDM2-228ENST00000542502 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
MDM2-228ENST00000542502 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
MDM2-228ENST00000542502 IER5LQ5T953 404 aa13□□□□□ -0.33
MDM2-228ENST00000542502 SEC24BO95487 1268 aa12.98□□□□□ -0.33
MDM2-228ENST00000542502 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
MDM2-228ENST00000542502 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
MDM2-228ENST00000542502 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
MDM2-228ENST00000542502 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
MDM2-228ENST00000542502 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
MDM2-228ENST00000542502 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
MDM2-228ENST00000542502 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
MDM2-228ENST00000542502 PLCG2P16885 1265 aa12.84□□□□□ -0.35
MDM2-228ENST00000542502 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
MDM2-228ENST00000542502 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
MDM2-228ENST00000542502 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
MDM2-228ENST00000542502 POTEMA6NI47 508 aa12.76□□□□□ -0.37
MDM2-228ENST00000542502 PSEN1P49768 467 aa12.76□□□□□ -0.37
MDM2-228ENST00000542502 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
MDM2-228ENST00000542502 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
MDM2-228ENST00000542502 PDAP1Q13442 181 aaKnown RBP12.72□□□□□ -0.37
MDM2-228ENST00000542502 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
MDM2-228ENST00000542502 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
MDM2-228ENST00000542502 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
MDM2-228ENST00000542502 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
MDM2-228ENST00000542502 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
MDM2-228ENST00000542502 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
MDM2-228ENST00000542502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.396e-12■■□□□ 11.5
MDM2-228ENST00000542502 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
MDM2-228ENST00000542502 ILDR1Q86SU0 546 aaPredicted RBP12.6□□□□□ -0.39
MDM2-228ENST00000542502 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
MDM2-228ENST00000542502 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
MDM2-228ENST00000542502 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
MDM2-228ENST00000542502 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
MDM2-228ENST00000542502 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
MDM2-228ENST00000542502 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
MDM2-228ENST00000542502 ST18O60284 1047 aa12.51□□□□□ -0.41
MDM2-228ENST00000542502 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
MDM2-228ENST00000542502 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
MDM2-228ENST00000542502 SNPHO15079 494 aa12.49□□□□□ -0.41
MDM2-228ENST00000542502 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
MDM2-228ENST00000542502 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
MDM2-228ENST00000542502 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
MDM2-228ENST00000542502 G3V3G9 751 aa12.43□□□□□ -0.42
MDM2-228ENST00000542502 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
MDM2-228ENST00000542502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
MDM2-228ENST00000542502 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
MDM2-228ENST00000542502 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
MDM2-228ENST00000542502 SOX12O15370 315 aa12.37□□□□□ -0.43
MDM2-228ENST00000542502 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
MDM2-228ENST00000542502 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
MDM2-228ENST00000542502 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
MDM2-228ENST00000542502 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
MDM2-228ENST00000542502 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
MDM2-228ENST00000542502 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
MDM2-228ENST00000542502 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
MDM2-228ENST00000542502 PKD2Q13563 968 aa12.27□□□□□ -0.45
MDM2-228ENST00000542502 EMP3P54852 163 aa12.25□□□□□ -0.45
MDM2-228ENST00000542502 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
MDM2-228ENST00000542502 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
MDM2-228ENST00000542502 STK25O00506 426 aa12.23□□□□□ -0.45
MDM2-228ENST00000542502 NLRP6P59044 892 aa12.23□□□□□ -0.45
MDM2-228ENST00000542502 RGL2O15211 777 aa12.21□□□□□ -0.45
MDM2-228ENST00000542502 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
MDM2-228ENST00000542502 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
MDM2-228ENST00000542502 DOK7Q18PE1 504 aa12.19□□□□□ -0.46
MDM2-228ENST00000542502 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
MDM2-228ENST00000542502 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
MDM2-228ENST00000542502 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
MDM2-228ENST00000542502 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms