RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
MDM2-228ENST00000542502 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
MDM2-228ENST00000542502 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
MDM2-228ENST00000542502 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
MDM2-228ENST00000542502 FOXD1Q16676 465 aa21.67■■□□□ 1.06
MDM2-228ENST00000542502 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
MDM2-228ENST00000542502 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
MDM2-228ENST00000542502 ADRA2BP18089 450 aa20.27■□□□□ 0.84
MDM2-228ENST00000542502 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
MDM2-228ENST00000542502 MSH5O43196 834 aa20.26■□□□□ 0.83
MDM2-228ENST00000542502 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
MDM2-228ENST00000542502 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
MDM2-228ENST00000542502 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
MDM2-228ENST00000542502 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
MDM2-228ENST00000542502 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
MDM2-228ENST00000542502 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
MDM2-228ENST00000542502 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
MDM2-228ENST00000542502 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
MDM2-228ENST00000542502 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
MDM2-228ENST00000542502 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
MDM2-228ENST00000542502 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
MDM2-228ENST00000542502 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
MDM2-228ENST00000542502 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
MDM2-228ENST00000542502 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
MDM2-228ENST00000542502 KCNA4P22459 653 aa17.08■□□□□ 0.32
MDM2-228ENST00000542502 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
MDM2-228ENST00000542502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.311e-8■■□□□ 11.6
MDM2-228ENST00000542502 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
MDM2-228ENST00000542502 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
MDM2-228ENST00000542502 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
MDM2-228ENST00000542502 CAPN15O75808 1086 aa16.33■□□□□ 0.2
MDM2-228ENST00000542502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
MDM2-228ENST00000542502 DSG3P32926 999 aa16.22■□□□□ 0.19
MDM2-228ENST00000542502 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
MDM2-228ENST00000542502 APLP2Q06481 763 aa16.2■□□□□ 0.18
MDM2-228ENST00000542502 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
MDM2-228ENST00000542502 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
MDM2-228ENST00000542502 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
MDM2-228ENST00000542502 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
MDM2-228ENST00000542502 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
MDM2-228ENST00000542502 ABCB7O75027 752 aa15.94■□□□□ 0.14
MDM2-228ENST00000542502 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
MDM2-228ENST00000542502 ZBTB22O15209 634 aa15.7■□□□□ 0.1
MDM2-228ENST00000542502 POLA2Q14181 598 aa15.68■□□□□ 0.1
MDM2-228ENST00000542502 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
MDM2-228ENST00000542502 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
MDM2-228ENST00000542502 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
MDM2-228ENST00000542502 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
MDM2-228ENST00000542502 POTEHQ6S545 545 aa15.38■□□□□ 0.05
MDM2-228ENST00000542502 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
MDM2-228ENST00000542502 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
MDM2-228ENST00000542502 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
MDM2-228ENST00000542502 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
MDM2-228ENST00000542502 FBLN2P98095 1184 aa15.05■□□□□ -0
MDM2-228ENST00000542502 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
MDM2-228ENST00000542502 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
MDM2-228ENST00000542502 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
MDM2-228ENST00000542502 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
MDM2-228ENST00000542502 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
MDM2-228ENST00000542502 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
MDM2-228ENST00000542502 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
MDM2-228ENST00000542502 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
MDM2-228ENST00000542502 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
MDM2-228ENST00000542502 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
MDM2-228ENST00000542502 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
MDM2-228ENST00000542502 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
MDM2-228ENST00000542502 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
MDM2-228ENST00000542502 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
MDM2-228ENST00000542502 HAX1O00165 279 aa14.47□□□□□ -0.09
MDM2-228ENST00000542502 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
MDM2-228ENST00000542502 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
MDM2-228ENST00000542502 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
MDM2-228ENST00000542502 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
MDM2-228ENST00000542502 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
MDM2-228ENST00000542502 EVX2Q03828 476 aa14.28□□□□□ -0.12
MDM2-228ENST00000542502 C19orf67A6NJJ6 358 aa14.22□□□□□ -0.13
MDM2-228ENST00000542502 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
MDM2-228ENST00000542502 FARP1Q9Y4F1 1045 aaPredicted RBP14.11□□□□□ -0.15
MDM2-228ENST00000542502 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
MDM2-228ENST00000542502 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
MDM2-228ENST00000542502 GABBR2O75899 941 aa13.98□□□□□ -0.17
MDM2-228ENST00000542502 PROM2Q8N271 834 aa13.97□□□□□ -0.17
MDM2-228ENST00000542502 CLCN6P51797 869 aa13.83□□□□□ -0.2
MDM2-228ENST00000542502 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
MDM2-228ENST00000542502 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
MDM2-228ENST00000542502 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
MDM2-228ENST00000542502 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
MDM2-228ENST00000542502 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
MDM2-228ENST00000542502 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
MDM2-228ENST00000542502 FKBP8Q14318 412 aa13.65□□□□□ -0.22
MDM2-228ENST00000542502 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
MDM2-228ENST00000542502 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
MDM2-228ENST00000542502 MIER1Q8N108 512 aa13.62□□□□□ -0.23
MDM2-228ENST00000542502 PHF12Q96QT6 1004 aa13.62□□□□□ -0.23
MDM2-228ENST00000542502 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
MDM2-228ENST00000542502 LHX8Q68G74 356 aa13.57□□□□□ -0.24
MDM2-228ENST00000542502 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
MDM2-228ENST00000542502 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
MDM2-228ENST00000542502 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
MDM2-228ENST00000542502 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms