RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
KNTC1-211ENST00000541427 POTEMA6NI47 508 aa12.97□□□□□ -0.33
KNTC1-211ENST00000541427 C7P10643 843 aa12.97□□□□□ -0.33
KNTC1-211ENST00000541427 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
KNTC1-211ENST00000541427 PROM2Q8N271 834 aa12.95□□□□□ -0.34
KNTC1-211ENST00000541427 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
KNTC1-211ENST00000541427 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
KNTC1-211ENST00000541427 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
KNTC1-211ENST00000541427 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
KNTC1-211ENST00000541427 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
KNTC1-211ENST00000541427 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
KNTC1-211ENST00000541427 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
KNTC1-211ENST00000541427 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
KNTC1-211ENST00000541427 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
KNTC1-211ENST00000541427 MIER1Q8N108 512 aa12.79□□□□□ -0.36
KNTC1-211ENST00000541427 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
KNTC1-211ENST00000541427 MAP3K13O43283 966 aa12.78□□□□□ -0.36
KNTC1-211ENST00000541427 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
KNTC1-211ENST00000541427 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
KNTC1-211ENST00000541427 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
KNTC1-211ENST00000541427 TIE1P35590 1138 aa12.74□□□□□ -0.37
KNTC1-211ENST00000541427 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
KNTC1-211ENST00000541427 LCE2DQ5TA82 110 aaPredicted RBP12.73□□□□□ -0.37
KNTC1-211ENST00000541427 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
KNTC1-211ENST00000541427 SEC24BO95487 1268 aa12.65□□□□□ -0.38
KNTC1-211ENST00000541427 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
KNTC1-211ENST00000541427 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-211ENST00000541427 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
KNTC1-211ENST00000541427 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
KNTC1-211ENST00000541427 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
KNTC1-211ENST00000541427 IER5LQ5T953 404 aa12.57□□□□□ -0.4
KNTC1-211ENST00000541427 NUBP1P53384 320 aa12.56□□□□□ -0.4
KNTC1-211ENST00000541427 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
KNTC1-211ENST00000541427 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
KNTC1-211ENST00000541427 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
KNTC1-211ENST00000541427 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
KNTC1-211ENST00000541427 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
KNTC1-211ENST00000541427 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
KNTC1-211ENST00000541427 PLCG2P16885 1265 aa12.43□□□□□ -0.42
KNTC1-211ENST00000541427 ST18O60284 1047 aa12.39□□□□□ -0.43
KNTC1-211ENST00000541427 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
KNTC1-211ENST00000541427 FKBP8Q14318 412 aa12.35□□□□□ -0.43
KNTC1-211ENST00000541427 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
KNTC1-211ENST00000541427 PYGBP11216 843 aa12.33□□□□□ -0.44
KNTC1-211ENST00000541427 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
KNTC1-211ENST00000541427 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
KNTC1-211ENST00000541427 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
KNTC1-211ENST00000541427 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
KNTC1-211ENST00000541427 SNPHO15079 494 aa12.22□□□□□ -0.45
KNTC1-211ENST00000541427 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
KNTC1-211ENST00000541427 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
KNTC1-211ENST00000541427 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
KNTC1-211ENST00000541427 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
KNTC1-211ENST00000541427 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
KNTC1-211ENST00000541427 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
KNTC1-211ENST00000541427 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
KNTC1-211ENST00000541427 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
KNTC1-211ENST00000541427 GSE1Q14687 1217 aa12.12□□□□□ -0.47
KNTC1-211ENST00000541427 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
KNTC1-211ENST00000541427 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
KNTC1-211ENST00000541427 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
KNTC1-211ENST00000541427 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
KNTC1-211ENST00000541427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.486e-7■■■■□ 21.9
KNTC1-211ENST00000541427 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
KNTC1-211ENST00000541427 PSEN1P49768 467 aa12.05□□□□□ -0.48
KNTC1-211ENST00000541427 EMP3P54852 163 aa12.04□□□□□ -0.48
KNTC1-211ENST00000541427 FAM205CA6NFA0 338 aa11.97□□□□□ -0.49
KNTC1-211ENST00000541427 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
KNTC1-211ENST00000541427 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
KNTC1-211ENST00000541427 PDAP1Q13442 181 aaKnown RBP11.96□□□□□ -0.49
KNTC1-211ENST00000541427 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
KNTC1-211ENST00000541427 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
KNTC1-211ENST00000541427 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
KNTC1-211ENST00000541427 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
KNTC1-211ENST00000541427 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
KNTC1-211ENST00000541427 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
KNTC1-211ENST00000541427 G3V3G9 751 aa11.89□□□□□ -0.51
KNTC1-211ENST00000541427 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
KNTC1-211ENST00000541427 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
KNTC1-211ENST00000541427 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
KNTC1-211ENST00000541427 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
KNTC1-211ENST00000541427 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
KNTC1-211ENST00000541427 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
KNTC1-211ENST00000541427 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
KNTC1-211ENST00000541427 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
KNTC1-211ENST00000541427 ERBB3P21860 1342 aa11.76□□□□□ -0.53
KNTC1-211ENST00000541427 EFCAB3Q8N7B9 438 aa11.73□□□□□ -0.53
KNTC1-211ENST00000541427 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
KNTC1-211ENST00000541427 VARS2Q5ST30 1063 aaKnown RBP11.68□□□□□ -0.54
KNTC1-211ENST00000541427 MICALL2Q8IY33 904 aa11.65□□□□□ -0.54
KNTC1-211ENST00000541427 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
KNTC1-211ENST00000541427 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
KNTC1-211ENST00000541427 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
KNTC1-211ENST00000541427 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
KNTC1-211ENST00000541427 ZNF687Q8N1G0 1237 aa11.59□□□□□ -0.55
KNTC1-211ENST00000541427 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
KNTC1-211ENST00000541427 SOX12O15370 315 aa11.58□□□□□ -0.56
KNTC1-211ENST00000541427 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
KNTC1-211ENST00000541427 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
KNTC1-211ENST00000541427 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms