RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
RAP1B-224ENST00000541216 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
RAP1B-224ENST00000541216 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
RAP1B-224ENST00000541216 MS4A3Q96HJ5 214 aa15.11■□□□□ 0.01
RAP1B-224ENST00000541216 POTEJP0CG39 1038 aa15.04■□□□□ -0
RAP1B-224ENST00000541216 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
RAP1B-224ENST00000541216 SCUBE2Q9NQ36 999 aa15.04■□□□□ -0
RAP1B-224ENST00000541216 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
RAP1B-224ENST00000541216 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
RAP1B-224ENST00000541216 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
RAP1B-224ENST00000541216 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
RAP1B-224ENST00000541216 LCE2DQ5TA82 110 aaPredicted RBP14.92□□□□□ -0.02
RAP1B-224ENST00000541216 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
RAP1B-224ENST00000541216 KIF12Q96FN5 646 aa14.84□□□□□ -0.03
RAP1B-224ENST00000541216 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
RAP1B-224ENST00000541216 TIE1P35590 1138 aa14.79□□□□□ -0.04
RAP1B-224ENST00000541216 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
RAP1B-224ENST00000541216 SEC24BO95487 1268 aa14.74□□□□□ -0.05
RAP1B-224ENST00000541216 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
RAP1B-224ENST00000541216 MAP3K13O43283 966 aa14.71□□□□□ -0.05
RAP1B-224ENST00000541216 CDAN1Q8IWY9 1227 aa14.71□□□□□ -0.05
RAP1B-224ENST00000541216 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
RAP1B-224ENST00000541216 PROM2Q8N271 834 aa14.66□□□□□ -0.06
RAP1B-224ENST00000541216 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
RAP1B-224ENST00000541216 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
RAP1B-224ENST00000541216 IER5LQ5T953 404 aa14.63□□□□□ -0.07
RAP1B-224ENST00000541216 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
RAP1B-224ENST00000541216 MIER1Q8N108 512 aa14.58□□□□□ -0.08
RAP1B-224ENST00000541216 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
RAP1B-224ENST00000541216 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
RAP1B-224ENST00000541216 SLAIN1Q8ND83 568 aa14.54□□□□□ -0.08
RAP1B-224ENST00000541216 ST18O60284 1047 aa14.51□□□□□ -0.09
RAP1B-224ENST00000541216 PCDHB13Q9Y5F0 798 aa14.51□□□□□ -0.09
RAP1B-224ENST00000541216 PLCG2P16885 1265 aa14.43□□□□□ -0.1
RAP1B-224ENST00000541216 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
RAP1B-224ENST00000541216 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
RAP1B-224ENST00000541216 TMEM121BQ9BXQ6 578 aaPredicted RBP14.39□□□□□ -0.11
RAP1B-224ENST00000541216 TMEM106CQ9BVX2 250 aa14.38□□□□□ -0.11
RAP1B-224ENST00000541216 SNPHO15079 494 aa14.37□□□□□ -0.11
RAP1B-224ENST00000541216 MMRN1Q13201 1228 aa14.37□□□□□ -0.11
RAP1B-224ENST00000541216 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
RAP1B-224ENST00000541216 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
RAP1B-224ENST00000541216 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
RAP1B-224ENST00000541216 NUBP1P53384 320 aa14.3□□□□□ -0.12
RAP1B-224ENST00000541216 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
RAP1B-224ENST00000541216 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
RAP1B-224ENST00000541216 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
RAP1B-224ENST00000541216 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
RAP1B-224ENST00000541216 EMP3P54852 163 aa14.09□□□□□ -0.15
RAP1B-224ENST00000541216 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
RAP1B-224ENST00000541216 C3orf67Q6ZVT6 689 aa14.07□□□□□ -0.16
RAP1B-224ENST00000541216 PYGBP11216 843 aa14.05□□□□□ -0.16
RAP1B-224ENST00000541216 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
RAP1B-224ENST00000541216 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
RAP1B-224ENST00000541216 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
RAP1B-224ENST00000541216 PDCD7Q8N8D1 485 aaKnown RBP13.98□□□□□ -0.17
RAP1B-224ENST00000541216 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
RAP1B-224ENST00000541216 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
RAP1B-224ENST00000541216 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
RAP1B-224ENST00000541216 KRTAP3-3Q9BYR6 98 aa13.96□□□□□ -0.17
RAP1B-224ENST00000541216 KRTAP3-2Q9BYR7 98 aa13.96□□□□□ -0.17
RAP1B-224ENST00000541216 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
RAP1B-224ENST00000541216 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
RAP1B-224ENST00000541216 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
RAP1B-224ENST00000541216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAP1B-224ENST00000541216 GSE1Q14687 1217 aa13.83□□□□□ -0.2
RAP1B-224ENST00000541216 G3V3G9 751 aa13.78□□□□□ -0.2
RAP1B-224ENST00000541216 PSEN1P49768 467 aa13.77□□□□□ -0.21
RAP1B-224ENST00000541216 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
RAP1B-224ENST00000541216 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
RAP1B-224ENST00000541216 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
RAP1B-224ENST00000541216 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
RAP1B-224ENST00000541216 FKBP8Q14318 412 aa13.72□□□□□ -0.21
RAP1B-224ENST00000541216 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
RAP1B-224ENST00000541216 ERBB3P21860 1342 aa13.7□□□□□ -0.22
RAP1B-224ENST00000541216 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
RAP1B-224ENST00000541216 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
RAP1B-224ENST00000541216 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
RAP1B-224ENST00000541216 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
RAP1B-224ENST00000541216 BOLA1Q9Y3E2 137 aa13.68□□□□□ -0.22
RAP1B-224ENST00000541216 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
RAP1B-224ENST00000541216 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
RAP1B-224ENST00000541216 RIMBP2O15034 1052 aa13.63□□□□□ -0.23
RAP1B-224ENST00000541216 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
RAP1B-224ENST00000541216 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
RAP1B-224ENST00000541216 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
RAP1B-224ENST00000541216 PTGER2P43116 358 aa13.53□□□□□ -0.24
RAP1B-224ENST00000541216 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
RAP1B-224ENST00000541216 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
RAP1B-224ENST00000541216 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
RAP1B-224ENST00000541216 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
RAP1B-224ENST00000541216 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
RAP1B-224ENST00000541216 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
RAP1B-224ENST00000541216 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
RAP1B-224ENST00000541216 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
RAP1B-224ENST00000541216 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
RAP1B-224ENST00000541216 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
RAP1B-224ENST00000541216 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
RAP1B-224ENST00000541216 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
RAP1B-224ENST00000541216 SOX12O15370 315 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms