RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
SOX9-AS1-214ENST00000540802 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
SOX9-AS1-214ENST00000540802 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
SOX9-AS1-214ENST00000540802 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
SOX9-AS1-214ENST00000540802 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
SOX9-AS1-214ENST00000540802 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
SOX9-AS1-214ENST00000540802 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
SOX9-AS1-214ENST00000540802 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
SOX9-AS1-214ENST00000540802 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
SOX9-AS1-214ENST00000540802 MAP3K13O43283 966 aa13.07□□□□□ -0.32
SOX9-AS1-214ENST00000540802 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
SOX9-AS1-214ENST00000540802 GSE1Q14687 1217 aa13.03□□□□□ -0.32
SOX9-AS1-214ENST00000540802 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
SOX9-AS1-214ENST00000540802 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
SOX9-AS1-214ENST00000540802 PYGBP11216 843 aa12.96□□□□□ -0.33
SOX9-AS1-214ENST00000540802 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
SOX9-AS1-214ENST00000540802 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
SOX9-AS1-214ENST00000540802 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
SOX9-AS1-214ENST00000540802 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
SOX9-AS1-214ENST00000540802 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
SOX9-AS1-214ENST00000540802 TIE1P35590 1138 aa12.91□□□□□ -0.34
SOX9-AS1-214ENST00000540802 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
SOX9-AS1-214ENST00000540802 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
SOX9-AS1-214ENST00000540802 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
SOX9-AS1-214ENST00000540802 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
SOX9-AS1-214ENST00000540802 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
SOX9-AS1-214ENST00000540802 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
SOX9-AS1-214ENST00000540802 LHX8Q68G74 356 aa12.81□□□□□ -0.36
SOX9-AS1-214ENST00000540802 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-214ENST00000540802 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
SOX9-AS1-214ENST00000540802 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
SOX9-AS1-214ENST00000540802 C7P10643 843 aa12.78□□□□□ -0.36
SOX9-AS1-214ENST00000540802 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.37
SOX9-AS1-214ENST00000540802 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
SOX9-AS1-214ENST00000540802 TRIM35Q9UPQ4 493 aa12.74□□□□□ -0.37
SOX9-AS1-214ENST00000540802 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
SOX9-AS1-214ENST00000540802 IER5LQ5T953 404 aa12.69□□□□□ -0.38
SOX9-AS1-214ENST00000540802 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
SOX9-AS1-214ENST00000540802 PSEN1P49768 467 aa12.68□□□□□ -0.38
SOX9-AS1-214ENST00000540802 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-214ENST00000540802 PKD2Q13563 968 aa12.64□□□□□ -0.39
SOX9-AS1-214ENST00000540802 RNF25Q96BH1 459 aaPredicted RBP12.63□□□□□ -0.39
SOX9-AS1-214ENST00000540802 COLQQ9Y215 455 aaPredicted RBP12.63□□□□□ -0.39
SOX9-AS1-214ENST00000540802 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
SOX9-AS1-214ENST00000540802 SEC24BO95487 1268 aa12.59□□□□□ -0.39
SOX9-AS1-214ENST00000540802 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
SOX9-AS1-214ENST00000540802 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
SOX9-AS1-214ENST00000540802 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
SOX9-AS1-214ENST00000540802 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
SOX9-AS1-214ENST00000540802 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
SOX9-AS1-214ENST00000540802 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
SOX9-AS1-214ENST00000540802 PLCG2P16885 1265 aa12.52□□□□□ -0.41
SOX9-AS1-214ENST00000540802 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
SOX9-AS1-214ENST00000540802 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-214ENST00000540802 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
SOX9-AS1-214ENST00000540802 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
SOX9-AS1-214ENST00000540802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-214ENST00000540802 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-214ENST00000540802 RGL2O15211 777 aa12.48□□□□□ -0.41
SOX9-AS1-214ENST00000540802 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
SOX9-AS1-214ENST00000540802 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
SOX9-AS1-214ENST00000540802 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
SOX9-AS1-214ENST00000540802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
SOX9-AS1-214ENST00000540802 EFCAB3Q8N7B9 438 aa12.42□□□□□ -0.42
SOX9-AS1-214ENST00000540802 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
SOX9-AS1-214ENST00000540802 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
SOX9-AS1-214ENST00000540802 SOX12O15370 315 aa12.36□□□□□ -0.43
SOX9-AS1-214ENST00000540802 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
SOX9-AS1-214ENST00000540802 STK25O00506 426 aa12.34□□□□□ -0.43
SOX9-AS1-214ENST00000540802 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
SOX9-AS1-214ENST00000540802 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
SOX9-AS1-214ENST00000540802 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
SOX9-AS1-214ENST00000540802 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
SOX9-AS1-214ENST00000540802 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
SOX9-AS1-214ENST00000540802 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
SOX9-AS1-214ENST00000540802 NLRP6P59044 892 aa12.24□□□□□ -0.45
SOX9-AS1-214ENST00000540802 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
SOX9-AS1-214ENST00000540802 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
SOX9-AS1-214ENST00000540802 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
SOX9-AS1-214ENST00000540802 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
SOX9-AS1-214ENST00000540802 MFRPQ9BY79 579 aa12.23□□□□□ -0.45
SOX9-AS1-214ENST00000540802 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
SOX9-AS1-214ENST00000540802 G3V3G9 751 aa12.18□□□□□ -0.46
SOX9-AS1-214ENST00000540802 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
SOX9-AS1-214ENST00000540802 DNAJC5Q9H3Z4 198 aa12.16□□□□□ -0.46
SOX9-AS1-214ENST00000540802 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
SOX9-AS1-214ENST00000540802 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
SOX9-AS1-214ENST00000540802 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
SOX9-AS1-214ENST00000540802 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
SOX9-AS1-214ENST00000540802 SNPHO15079 494 aa12.07□□□□□ -0.48
SOX9-AS1-214ENST00000540802 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
SOX9-AS1-214ENST00000540802 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
SOX9-AS1-214ENST00000540802 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
SOX9-AS1-214ENST00000540802 PPP1R37O75864 691 aa12.04□□□□□ -0.48
SOX9-AS1-214ENST00000540802 ST18O60284 1047 aa12.02□□□□□ -0.49
SOX9-AS1-214ENST00000540802 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
SOX9-AS1-214ENST00000540802 POTEMA6NI47 508 aa12□□□□□ -0.49
SOX9-AS1-214ENST00000540802 POTEGQ6S5H5 508 aa12□□□□□ -0.49
SOX9-AS1-214ENST00000540802 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
SOX9-AS1-214ENST00000540802 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms