RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
MDM2-227ENST00000540709 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
MDM2-227ENST00000540709 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
MDM2-227ENST00000540709 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
MDM2-227ENST00000540709 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
MDM2-227ENST00000540709 CLCN6P51797 869 aa11.37□□□□□ -0.59
MDM2-227ENST00000540709 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
MDM2-227ENST00000540709 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
MDM2-227ENST00000540709 KIF12Q96FN5 646 aa11.34□□□□□ -0.59
MDM2-227ENST00000540709 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
MDM2-227ENST00000540709 MAP3K13O43283 966 aa11.33□□□□□ -0.6
MDM2-227ENST00000540709 PYGBP11216 843 aa11.33□□□□□ -0.6
MDM2-227ENST00000540709 GSE1Q14687 1217 aa11.32□□□□□ -0.6
MDM2-227ENST00000540709 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
MDM2-227ENST00000540709 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
MDM2-227ENST00000540709 LHX8Q68G74 356 aa11.22□□□□□ -0.61
MDM2-227ENST00000540709 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
MDM2-227ENST00000540709 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
MDM2-227ENST00000540709 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
MDM2-227ENST00000540709 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
MDM2-227ENST00000540709 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
MDM2-227ENST00000540709 BMP2KQ9NSY1 1161 aaPredicted RBP11.13□□□□□ -0.63
MDM2-227ENST00000540709 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
MDM2-227ENST00000540709 TIE1P35590 1138 aa11.11□□□□□ -0.63
MDM2-227ENST00000540709 ATN1P54259 1190 aaPredicted RBP11.11□□□□□ -0.63
MDM2-227ENST00000540709 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
MDM2-227ENST00000540709 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
MDM2-227ENST00000540709 ASTLQ6HA08 431 aaPredicted RBP11.1□□□□□ -0.63
MDM2-227ENST00000540709 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
MDM2-227ENST00000540709 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
MDM2-227ENST00000540709 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
MDM2-227ENST00000540709 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
MDM2-227ENST00000540709 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
MDM2-227ENST00000540709 PSEN1P49768 467 aa11.03□□□□□ -0.64
MDM2-227ENST00000540709 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
MDM2-227ENST00000540709 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
MDM2-227ENST00000540709 C7P10643 843 aa11□□□□□ -0.65
MDM2-227ENST00000540709 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
MDM2-227ENST00000540709 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
MDM2-227ENST00000540709 PKD2Q13563 968 aa10.99□□□□□ -0.65
MDM2-227ENST00000540709 SEC24BO95487 1268 aa10.98□□□□□ -0.65
MDM2-227ENST00000540709 RIOK3O14730 519 aaKnown RBP10.97□□□□□ -0.65
MDM2-227ENST00000540709 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.65
MDM2-227ENST00000540709 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
MDM2-227ENST00000540709 MKRN3Q13064 507 aaKnown RBP10.92□□□□□ -0.66
MDM2-227ENST00000540709 RGL2O15211 777 aa10.91□□□□□ -0.66
MDM2-227ENST00000540709 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
MDM2-227ENST00000540709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
MDM2-227ENST00000540709 POTEB2H3BUK9 544 aa10.9□□□□□ -0.66
MDM2-227ENST00000540709 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
MDM2-227ENST00000540709 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
MDM2-227ENST00000540709 PLCG2P16885 1265 aa10.89□□□□□ -0.67
MDM2-227ENST00000540709 IER5LQ5T953 404 aa10.89□□□□□ -0.67
MDM2-227ENST00000540709 POTEFA5A3E0 1075 aa10.87□□□□□ -0.67
MDM2-227ENST00000540709 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
MDM2-227ENST00000540709 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
MDM2-227ENST00000540709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.84□□□□□ -0.67
MDM2-227ENST00000540709 STK25O00506 426 aa10.83□□□□□ -0.68
MDM2-227ENST00000540709 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
MDM2-227ENST00000540709 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
MDM2-227ENST00000540709 EFCAB3Q8N7B9 438 aa10.82□□□□□ -0.68
MDM2-227ENST00000540709 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
MDM2-227ENST00000540709 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
MDM2-227ENST00000540709 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
MDM2-227ENST00000540709 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
MDM2-227ENST00000540709 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
MDM2-227ENST00000540709 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
MDM2-227ENST00000540709 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
MDM2-227ENST00000540709 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
MDM2-227ENST00000540709 DPY19L2Q6NUT2 758 aa10.73□□□□□ -0.69
MDM2-227ENST00000540709 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
MDM2-227ENST00000540709 G3V3G9 751 aa10.7□□□□□ -0.7
MDM2-227ENST00000540709 SOX12O15370 315 aa10.7□□□□□ -0.7
MDM2-227ENST00000540709 PHF8Q9UPP1 1060 aa10.7□□□□□ -0.7
MDM2-227ENST00000540709 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
MDM2-227ENST00000540709 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
MDM2-227ENST00000540709 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
MDM2-227ENST00000540709 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
MDM2-227ENST00000540709 SLAIN1Q8ND83 568 aa10.65□□□□□ -0.7
MDM2-227ENST00000540709 NLRP6P59044 892 aa10.64□□□□□ -0.71
MDM2-227ENST00000540709 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
MDM2-227ENST00000540709 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
MDM2-227ENST00000540709 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
MDM2-227ENST00000540709 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
MDM2-227ENST00000540709 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
MDM2-227ENST00000540709 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
MDM2-227ENST00000540709 POTEMA6NI47 508 aa10.58□□□□□ -0.72
MDM2-227ENST00000540709 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
MDM2-227ENST00000540709 FAM163AQ96GL9 167 aaPredicted RBP10.55□□□□□ -0.72
MDM2-227ENST00000540709 POTEGQ6S5H5 508 aa10.54□□□□□ -0.72
MDM2-227ENST00000540709 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
MDM2-227ENST00000540709 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
MDM2-227ENST00000540709 PPP1R37O75864 691 aa10.49□□□□□ -0.73
MDM2-227ENST00000540709 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
MDM2-227ENST00000540709 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
MDM2-227ENST00000540709 SNPHO15079 494 aa10.42□□□□□ -0.74
MDM2-227ENST00000540709 DNAJC5Q9H3Z4 198 aa10.42□□□□□ -0.74
MDM2-227ENST00000540709 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
MDM2-227ENST00000540709 TMEM92Q6UXU6 159 aa10.41□□□□□ -0.74
MDM2-227ENST00000540709 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms