RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 GSE1Q14687 1217 aa13.36□□□□□ -0.27
MRE11-209ENST00000540013 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
MRE11-209ENST00000540013 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
MRE11-209ENST00000540013 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
MRE11-209ENST00000540013 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
MRE11-209ENST00000540013 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
MRE11-209ENST00000540013 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
MRE11-209ENST00000540013 PKD2Q13563 968 aa13.23□□□□□ -0.29
MRE11-209ENST00000540013 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
MRE11-209ENST00000540013 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
MRE11-209ENST00000540013 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
MRE11-209ENST00000540013 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
MRE11-209ENST00000540013 POTEMA6NI47 508 aa13.18□□□□□ -0.3
MRE11-209ENST00000540013 CLCN6P51797 869 aa13.17□□□□□ -0.3
MRE11-209ENST00000540013 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
MRE11-209ENST00000540013 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
MRE11-209ENST00000540013 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
MRE11-209ENST00000540013 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
MRE11-209ENST00000540013 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
MRE11-209ENST00000540013 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
MRE11-209ENST00000540013 PYGBP11216 843 aa13.05□□□□□ -0.32
MRE11-209ENST00000540013 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
MRE11-209ENST00000540013 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
MRE11-209ENST00000540013 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
MRE11-209ENST00000540013 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
MRE11-209ENST00000540013 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
MRE11-209ENST00000540013 RGL2O15211 777 aa12.99□□□□□ -0.33
MRE11-209ENST00000540013 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
MRE11-209ENST00000540013 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
MRE11-209ENST00000540013 KIF12Q96FN5 646 aa12.96□□□□□ -0.33
MRE11-209ENST00000540013 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
MRE11-209ENST00000540013 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
MRE11-209ENST00000540013 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
MRE11-209ENST00000540013 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
MRE11-209ENST00000540013 MAP3K13O43283 966 aa12.91□□□□□ -0.34
MRE11-209ENST00000540013 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
MRE11-209ENST00000540013 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
MRE11-209ENST00000540013 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
MRE11-209ENST00000540013 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
MRE11-209ENST00000540013 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
MRE11-209ENST00000540013 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
MRE11-209ENST00000540013 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
MRE11-209ENST00000540013 STK25O00506 426 aa12.79□□□□□ -0.36
MRE11-209ENST00000540013 PSEN1P49768 467 aa12.79□□□□□ -0.36
MRE11-209ENST00000540013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
MRE11-209ENST00000540013 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
MRE11-209ENST00000540013 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
MRE11-209ENST00000540013 TIE1P35590 1138 aa12.73□□□□□ -0.37
MRE11-209ENST00000540013 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
MRE11-209ENST00000540013 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
MRE11-209ENST00000540013 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
MRE11-209ENST00000540013 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
MRE11-209ENST00000540013 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
MRE11-209ENST00000540013 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
MRE11-209ENST00000540013 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
MRE11-209ENST00000540013 LCE2DQ5TA82 110 aaPredicted RBP12.67□□□□□ -0.38
MRE11-209ENST00000540013 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
MRE11-209ENST00000540013 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
MRE11-209ENST00000540013 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
MRE11-209ENST00000540013 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
MRE11-209ENST00000540013 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
MRE11-209ENST00000540013 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
MRE11-209ENST00000540013 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
MRE11-209ENST00000540013 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
MRE11-209ENST00000540013 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
MRE11-209ENST00000540013 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
MRE11-209ENST00000540013 SOX12O15370 315 aa12.57□□□□□ -0.4
MRE11-209ENST00000540013 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
MRE11-209ENST00000540013 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
MRE11-209ENST00000540013 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
MRE11-209ENST00000540013 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
MRE11-209ENST00000540013 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
MRE11-209ENST00000540013 C7P10643 843 aa12.54□□□□□ -0.4
MRE11-209ENST00000540013 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
MRE11-209ENST00000540013 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
MRE11-209ENST00000540013 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
MRE11-209ENST00000540013 NLRP6P59044 892 aa12.51□□□□□ -0.41
MRE11-209ENST00000540013 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
MRE11-209ENST00000540013 IER5LQ5T953 404 aa12.51□□□□□ -0.41
MRE11-209ENST00000540013 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
MRE11-209ENST00000540013 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
MRE11-209ENST00000540013 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
MRE11-209ENST00000540013 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
MRE11-209ENST00000540013 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
MRE11-209ENST00000540013 MFRPQ9BY79 579 aa12.45□□□□□ -0.42
MRE11-209ENST00000540013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■■■□ 21.3
MRE11-209ENST00000540013 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
MRE11-209ENST00000540013 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
MRE11-209ENST00000540013 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
MRE11-209ENST00000540013 OCEL1Q9H607 264 aa12.39□□□□□ -0.43
MRE11-209ENST00000540013 SEC24BO95487 1268 aa12.38□□□□□ -0.43
MRE11-209ENST00000540013 PLCG2P16885 1265 aa12.38□□□□□ -0.43
MRE11-209ENST00000540013 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
MRE11-209ENST00000540013 HAP1P54257 671 aaPredicted RBP12.35□□□□□ -0.43
MRE11-209ENST00000540013 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
MRE11-209ENST00000540013 G3V3G9 751 aa12.3□□□□□ -0.44
MRE11-209ENST00000540013 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
MRE11-209ENST00000540013 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
MRE11-209ENST00000540013 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
MRE11-209ENST00000540013 PPP1R37O75864 691 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms